RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 LTKP29376 864 aa30.28■■■□□ 2.44
HOMER3-204ENST00000539827 SRPK2P78362 688 aaKnown RBP30.28■■■□□ 2.44
HOMER3-204ENST00000539827 WAPLQ7Z5K2 1190 aa30.28■■■□□ 2.44
HOMER3-204ENST00000539827 NSD3Q9BZ95 1437 aa30.26■■■□□ 2.43
HOMER3-204ENST00000539827 ABCC11Q96J66 1382 aa30.26■■■□□ 2.43
HOMER3-204ENST00000539827 PLEKHH1Q9ULM0 1364 aa30.25■■■□□ 2.43
HOMER3-204ENST00000539827 TXNDC2Q86VQ3 553 aa30.25■■■□□ 2.43
HOMER3-204ENST00000539827 RIMS1Q86UR5 1692 aaKnown RBP30.25■■■□□ 2.43
HOMER3-204ENST00000539827 SENP3-EIF4A1A0A087X0R7 540 aa30.23■■■□□ 2.43
HOMER3-204ENST00000539827 PLEKHG1Q9ULL1 1385 aa30.21■■■□□ 2.43
HOMER3-204ENST00000539827 CDK19Q9BWU1 502 aa30.21■■■□□ 2.43
HOMER3-204ENST00000539827 EID1Q9Y6B2 187 aa30.2■■■□□ 2.43
HOMER3-204ENST00000539827 ADAMTS13Q76LX8 1427 aa30.2■■■□□ 2.42
HOMER3-204ENST00000539827 ANKRD36BQ8N2N9 1353 aa30.18■■■□□ 2.42
HOMER3-204ENST00000539827 ARHGAP23Q9P227 1491 aa30.17■■■□□ 2.42
HOMER3-204ENST00000539827 SLIT1O75093 1534 aa30.17■■■□□ 2.42
HOMER3-204ENST00000539827 ATAD2Q6PL18 1390 aa30.16■■■□□ 2.42
HOMER3-204ENST00000539827 THEMISQ8N1K5 641 aaPredicted RBP30.16■■■□□ 2.42
HOMER3-204ENST00000539827 KNDC1Q76NI1 1749 aa30.15■■■□□ 2.42
HOMER3-204ENST00000539827 NINLQ9Y2I6 1382 aa30.13■■■□□ 2.41
HOMER3-204ENST00000539827 ADAMTSL3P82987 1691 aa30.13■■■□□ 2.41
HOMER3-204ENST00000539827 SLC26A8Q96RN1 970 aa30.12■■■□□ 2.41
HOMER3-204ENST00000539827 TECPR2O15040 1411 aa30.11■■■□□ 2.41
HOMER3-204ENST00000539827 MORC1Q86VD1 984 aa30.11■■■□□ 2.41
HOMER3-204ENST00000539827 USP32Q8NFA0 1604 aa30.11■■■□□ 2.41
HOMER3-204ENST00000539827 SIRT1Q96EB6 747 aa30.1■■■□□ 2.41
HOMER3-204ENST00000539827 A0A1W2PP64 1363 aa30.1■■■□□ 2.41
HOMER3-204ENST00000539827 CGNL1Q0VF96 1302 aa30.1■■■□□ 2.41
HOMER3-204ENST00000539827 CPS1P31327 1500 aa30.1■■■□□ 2.41
HOMER3-204ENST00000539827 FAM135BQ49AJ0 1406 aa30.09■■■□□ 2.41
HOMER3-204ENST00000539827 SUPT16HQ9Y5B9 1047 aaKnown RBP30.08■■■□□ 2.41
HOMER3-204ENST00000539827 MED14O60244 1454 aa30.08■■■□□ 2.41
HOMER3-204ENST00000539827 CEP170BQ9Y4F5 1589 aaPredicted RBP30.08■■■□□ 2.41
HOMER3-204ENST00000539827 TERF2IPQ9NYB0 399 aa30.06■■■□□ 2.4
HOMER3-204ENST00000539827 CABP1Q9NZU7 370 aa30.06■■■□□ 2.4
HOMER3-204ENST00000539827 ROBO2Q9HCK4 1378 aa30.06■■■□□ 2.4
HOMER3-204ENST00000539827 WASLO00401 505 aaPredicted RBP30.05■■■□□ 2.4
HOMER3-204ENST00000539827 TNNT2P45379 298 aaPredicted RBP30.05■■■□□ 2.4
HOMER3-204ENST00000539827 ADAMTS8Q9UP79 889 aa30.04■■■□□ 2.4
HOMER3-204ENST00000539827 CD163L1Q9NR16 1453 aa30.04■■■□□ 2.4
HOMER3-204ENST00000539827 FKBP8Q14318 412 aa30.04■■■□□ 2.4
HOMER3-204ENST00000539827 WDR43Q15061 677 aaKnown RBP eCLIP30.04■■■□□ 2.4
HOMER3-204ENST00000539827 SALL2Q9Y467 1007 aaPredicted RBP30.03■■■□□ 2.4
HOMER3-204ENST00000539827 BLMP54132 1417 aaPredicted RBP30.03■■■□□ 2.4
HOMER3-204ENST00000539827 PTPRUQ92729 1446 aa30.03■■■□□ 2.4
HOMER3-204ENST00000539827 INSRP06213 1382 aa30.02■■■□□ 2.4
HOMER3-204ENST00000539827 HDGFL2Q7Z4V5 671 aaPredicted RBP30.02■■■□□ 2.4
HOMER3-204ENST00000539827 TBX22Q9Y458 520 aa30.01■■■□□ 2.4
HOMER3-204ENST00000539827 NEFLP07196 543 aa30.01■■■□□ 2.39
HOMER3-204ENST00000539827 NSD2O96028 1365 aa29.99■■■□□ 2.39
HOMER3-204ENST00000539827 AMOTL2Q9Y2J4 779 aa29.97■■■□□ 2.39
HOMER3-204ENST00000539827 SMG6Q86US8 1419 aaKnown RBP29.97■■■□□ 2.39
HOMER3-204ENST00000539827 NUDT16Q96DE0 195 aaKnown RBP29.95■■■□□ 2.38
HOMER3-204ENST00000539827 GGNBP2Q9H3C7 697 aa29.95■■■□□ 2.38
HOMER3-204ENST00000539827 NUDCQ9Y266 331 aa29.95■■■□□ 2.38
HOMER3-204ENST00000539827 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.94■■■□□ 2.38
HOMER3-204ENST00000539827 DIP2AQ14689 1571 aa29.93■■■□□ 2.38
HOMER3-204ENST00000539827 PPIP5K1Q6PFW1 1433 aa29.93■■■□□ 2.38
HOMER3-204ENST00000539827 POLR3AO14802 1390 aaPredicted RBP29.93■■■□□ 2.38
HOMER3-204ENST00000539827 ZNF142P52746 1687 aaPredicted RBP29.92■■■□□ 2.38
HOMER3-204ENST00000539827 NCKAP5LQ9HCH0 1330 aa29.92■■■□□ 2.38
HOMER3-204ENST00000539827 ATP7BP35670 1465 aa29.92■■■□□ 2.38
HOMER3-204ENST00000539827 FYB1O15117 783 aa29.92■■■□□ 2.38
HOMER3-204ENST00000539827 MTHFSP49914 203 aa29.89■■■□□ 2.38
HOMER3-204ENST00000539827 ANKLE2Q86XL3 938 aa29.88■■■□□ 2.37
HOMER3-204ENST00000539827 SETD1BQ9UPS6 1966 aaKnown RBP29.88■■■□□ 2.37
HOMER3-204ENST00000539827 PRR36Q9H6K5 1346 aa29.87■■■□□ 2.37
HOMER3-204ENST00000539827 PELP1Q8IZL8 1130 aaKnown RBP29.87■■■□□ 2.37
HOMER3-204ENST00000539827 CCDC61Q9Y6R9 512 aa29.87■■■□□ 2.37
HOMER3-204ENST00000539827 ADGRB2O60241 1585 aa29.87■■■□□ 2.37
HOMER3-204ENST00000539827 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.86■■■□□ 2.37
HOMER3-204ENST00000539827 CCDC146Q8IYE0 955 aa29.86■■■□□ 2.37
HOMER3-204ENST00000539827 ANKRD26Q9UPS8 1709 aa29.86■■■□□ 2.37
HOMER3-204ENST00000539827 IRX6P78412 446 aaPredicted RBP29.84■■■□□ 2.37
HOMER3-204ENST00000539827 KIF20BQ96Q89 1820 aa29.84■■■□□ 2.37
HOMER3-204ENST00000539827 CPSF1Q10570 1443 aaKnown RBP29.84■■■□□ 2.37
HOMER3-204ENST00000539827 PTCH1Q13635 1447 aa29.83■■■□□ 2.37
HOMER3-204ENST00000539827 NUTM2FA1L443 756 aa29.83■■■□□ 2.37
HOMER3-204ENST00000539827 CFAP53Q96M91 514 aa29.82■■■□□ 2.36
HOMER3-204ENST00000539827 CDC42BPGQ6DT37 1551 aa29.81■■■□□ 2.36
HOMER3-204ENST00000539827 SHPRHQ149N8 1683 aa29.81■■■□□ 2.36
HOMER3-204ENST00000539827 XRN1Q8IZH2 1706 aaKnown RBP29.81■■■□□ 2.36
HOMER3-204ENST00000539827 PDE3BQ13370 1112 aa29.81■■■□□ 2.36
HOMER3-204ENST00000539827 KCNA6P17658 529 aa29.79■■■□□ 2.36
HOMER3-204ENST00000539827 CDCA7LQ96GN5 454 aa29.79■■■□□ 2.36
HOMER3-204ENST00000539827 EDC4Q6P2E9 1401 aaKnown RBP29.78■■■□□ 2.36
HOMER3-204ENST00000539827 PIK3R4Q99570 1358 aa29.77■■■□□ 2.36
HOMER3-204ENST00000539827 ITSN1Q15811 1721 aa29.75■■■□□ 2.35
HOMER3-204ENST00000539827 AKAP12Q02952 1782 aa29.75■■■□□ 2.35
HOMER3-204ENST00000539827 APAF1O14727 1248 aa29.74■■■□□ 2.35
HOMER3-204ENST00000539827 MON2Q7Z3U7 1717 aa29.74■■■□□ 2.35
HOMER3-204ENST00000539827 NME9Q86XW9 330 aa29.73■■■□□ 2.35
HOMER3-204ENST00000539827 TOPAZ1Q8N9V7 1692 aa29.73■■■□□ 2.35
HOMER3-204ENST00000539827 ZNF692Q9BU19 519 aaPredicted RBP29.72■■■□□ 2.35
HOMER3-204ENST00000539827 ZRANB1Q9UGI0 708 aa29.72■■■□□ 2.35
HOMER3-204ENST00000539827 PLEKHG3A1L390 1219 aa29.7■■■□□ 2.34
HOMER3-204ENST00000539827 ACEP12821 1306 aa29.69■■■□□ 2.34
HOMER3-204ENST00000539827 CHD2O14647 1828 aaKnown RBP29.69■■■□□ 2.34
HOMER3-204ENST00000539827 NPHP4O75161 1426 aaPredicted RBP29.68■■■□□ 2.34
HOMER3-204ENST00000539827 FBLN1P23142 703 aa29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms