RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 CABP2Q9NPB3 220 aa23.09■■□□□ 1.29
PCDHB17P-201ENST00000539533 AMER1Q5JTC6 1135 aaPredicted RBP23.08■■□□□ 1.29
PCDHB17P-201ENST00000539533 WAPLQ7Z5K2 1190 aa23.08■■□□□ 1.29
PCDHB17P-201ENST00000539533 THEMISQ8N1K5 641 aaPredicted RBP23.07■■□□□ 1.28
PCDHB17P-201ENST00000539533 CARD14Q9BXL6 1004 aa23.07■■□□□ 1.28
PCDHB17P-201ENST00000539533 EID1Q9Y6B2 187 aa23.07■■□□□ 1.28
PCDHB17P-201ENST00000539533 ABCC11Q96J66 1382 aa23.07■■□□□ 1.28
PCDHB17P-201ENST00000539533 HNRNPUQ00839 825 aaKnown RBP eCLIP23.06■■□□□ 1.28
PCDHB17P-201ENST00000539533 SLIT1O75093 1534 aa23.06■■□□□ 1.28
PCDHB17P-201ENST00000539533 ADAMTS13Q76LX8 1427 aa23.06■■□□□ 1.28
PCDHB17P-201ENST00000539533 PLEKHG1Q9ULL1 1385 aa23.05■■□□□ 1.28
PCDHB17P-201ENST00000539533 PLEKHH1Q9ULM0 1364 aa23.05■■□□□ 1.28
PCDHB17P-201ENST00000539533 RBM19Q9Y4C8 960 aaKnown RBP23.05■■□□□ 1.28
PCDHB17P-201ENST00000539533 ARHGAP23Q9P227 1491 aa23.05■■□□□ 1.28
PCDHB17P-201ENST00000539533 PUS7Q96PZ0 661 aaKnown RBP23.05■■□□□ 1.28
PCDHB17P-201ENST00000539533 DLC1Q96QB1 1528 aa23.04■■□□□ 1.28
PCDHB17P-201ENST00000539533 SRPK2P78362 688 aaKnown RBP23.04■■□□□ 1.28
PCDHB17P-201ENST00000539533 BRD4O60885 1362 aaPredicted RBP23.03■■□□□ 1.28
PCDHB17P-201ENST00000539533 NLRP13Q86W25 1043 aa23.03■■□□□ 1.28
PCDHB17P-201ENST00000539533 PNISRQ8TF01 805 aaKnown RBP23.02■■□□□ 1.28
PCDHB17P-201ENST00000539533 SLC26A8Q96RN1 970 aa23.02■■□□□ 1.28
PCDHB17P-201ENST00000539533 CEP170BQ9Y4F5 1589 aaPredicted RBP23.01■■□□□ 1.27
PCDHB17P-201ENST00000539533 CDK19Q9BWU1 502 aa22.99■■□□□ 1.27
PCDHB17P-201ENST00000539533 NPC1L1Q9UHC9 1359 aa22.98■■□□□ 1.27
PCDHB17P-201ENST00000539533 MED14O60244 1454 aa22.98■■□□□ 1.27
PCDHB17P-201ENST00000539533 TECPR2O15040 1411 aa22.96■■□□□ 1.27
PCDHB17P-201ENST00000539533 NSD3Q9BZ95 1437 aa22.96■■□□□ 1.27
PCDHB17P-201ENST00000539533 PPP2R1AP30153 589 aa22.94■■□□□ 1.26
PCDHB17P-201ENST00000539533 SIRT1Q96EB6 747 aa22.94■■□□□ 1.26
PCDHB17P-201ENST00000539533 KNDC1Q76NI1 1749 aa22.94■■□□□ 1.26
PCDHB17P-201ENST00000539533 ATAD2Q6PL18 1390 aa22.93■■□□□ 1.26
PCDHB17P-201ENST00000539533 ROBO2Q9HCK4 1378 aa22.93■■□□□ 1.26
PCDHB17P-201ENST00000539533 FAM135BQ49AJ0 1406 aa22.93■■□□□ 1.26
PCDHB17P-201ENST00000539533 ANKRD36BQ8N2N9 1353 aa22.93■■□□□ 1.26
PCDHB17P-201ENST00000539533 TBX22Q9Y458 520 aa22.93■■□□□ 1.26
PCDHB17P-201ENST00000539533 CPS1P31327 1500 aa22.92■■□□□ 1.26
PCDHB17P-201ENST00000539533 PTPRUQ92729 1446 aa22.92■■□□□ 1.26
PCDHB17P-201ENST00000539533 SETD1BQ9UPS6 1966 aaKnown RBP22.92■■□□□ 1.26
PCDHB17P-201ENST00000539533 NINLQ9Y2I6 1382 aa22.89■■□□□ 1.26
PCDHB17P-201ENST00000539533 WASLO00401 505 aaPredicted RBP22.89■■□□□ 1.26
PCDHB17P-201ENST00000539533 A0A1W2PP64 1363 aa22.89■■□□□ 1.25
PCDHB17P-201ENST00000539533 ZNF142P52746 1687 aaPredicted RBP22.89■■□□□ 1.25
PCDHB17P-201ENST00000539533 CABP1Q9NZU7 370 aa22.89■■□□□ 1.25
PCDHB17P-201ENST00000539533 AMOTL2Q9Y2J4 779 aa22.89■■□□□ 1.25
PCDHB17P-201ENST00000539533 SENP3-EIF4A1A0A087X0R7 540 aa22.86■■□□□ 1.25
PCDHB17P-201ENST00000539533 ANKLE2Q86XL3 938 aa22.86■■□□□ 1.25
PCDHB17P-201ENST00000539533 CD163L1Q9NR16 1453 aa22.86■■□□□ 1.25
PCDHB17P-201ENST00000539533 CGNL1Q0VF96 1302 aa22.86■■□□□ 1.25
PCDHB17P-201ENST00000539533 TERF2IPQ9NYB0 399 aa22.85■■□□□ 1.25
PCDHB17P-201ENST00000539533 ZBED9Q6R2W3 1325 aa22.84■■□□□ 1.25
PCDHB17P-201ENST00000539533 MORC1Q86VD1 984 aa22.83■■□□□ 1.25
PCDHB17P-201ENST00000539533 USP32Q8NFA0 1604 aa22.83■■□□□ 1.25
PCDHB17P-201ENST00000539533 DIP2AQ14689 1571 aa22.83■■□□□ 1.25
PCDHB17P-201ENST00000539533 IRX6P78412 446 aaPredicted RBP22.82■■□□□ 1.24
PCDHB17P-201ENST00000539533 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.82■■□□□ 1.24
PCDHB17P-201ENST00000539533 TNNT2P45379 298 aaPredicted RBP22.82■■□□□ 1.24
PCDHB17P-201ENST00000539533 NCKAP5LQ9HCH0 1330 aa22.81■■□□□ 1.24
PCDHB17P-201ENST00000539533 HDGFL2Q7Z4V5 671 aaPredicted RBP22.81■■□□□ 1.24
PCDHB17P-201ENST00000539533 NUDT16Q96DE0 195 aaKnown RBP22.81■■□□□ 1.24
PCDHB17P-201ENST00000539533 PPIP5K1Q6PFW1 1433 aa22.78■■□□□ 1.24
PCDHB17P-201ENST00000539533 KCNA6P17658 529 aa22.77■■□□□ 1.24
PCDHB17P-201ENST00000539533 ERICH6BQ5W0A0 696 aa22.77■■□□□ 1.24
PCDHB17P-201ENST00000539533 PTCH1Q13635 1447 aa22.77■■□□□ 1.24
PCDHB17P-201ENST00000539533 MSH5O43196 834 aa22.77■■□□□ 1.24
PCDHB17P-201ENST00000539533 PRR36Q9H6K5 1346 aa22.77■■□□□ 1.23
PCDHB17P-201ENST00000539533 GGNBP2Q9H3C7 697 aa22.76■■□□□ 1.23
PCDHB17P-201ENST00000539533 ADAMTS8Q9UP79 889 aa22.76■■□□□ 1.23
PCDHB17P-201ENST00000539533 CCDC61Q9Y6R9 512 aa22.76■■□□□ 1.23
PCDHB17P-201ENST00000539533 NSD2O96028 1365 aa22.75■■□□□ 1.23
PCDHB17P-201ENST00000539533 FYB1O15117 783 aa22.75■■□□□ 1.23
PCDHB17P-201ENST00000539533 ATP7BP35670 1465 aa22.75■■□□□ 1.23
PCDHB17P-201ENST00000539533 NUTM2FA1L443 756 aa22.75■■□□□ 1.23
PCDHB17P-201ENST00000539533 PIK3R4Q99570 1358 aa22.74■■□□□ 1.23
PCDHB17P-201ENST00000539533 XRN1Q8IZH2 1706 aaKnown RBP22.74■■□□□ 1.23
PCDHB17P-201ENST00000539533 ADGRB2O60241 1585 aa22.74■■□□□ 1.23
PCDHB17P-201ENST00000539533 FANCIQ9NVI1 1328 aa22.73■■□□□ 1.23
PCDHB17P-201ENST00000539533 WDR43Q15061 677 aaKnown RBP eCLIP22.72■■□□□ 1.23
PCDHB17P-201ENST00000539533 CPSF1Q10570 1443 aaKnown RBP22.71■■□□□ 1.23
PCDHB17P-201ENST00000539533 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.71■■□□□ 1.23
PCDHB17P-201ENST00000539533 SALL2Q9Y467 1007 aaPredicted RBP22.7■■□□□ 1.22
PCDHB17P-201ENST00000539533 NPHP4O75161 1426 aaPredicted RBP22.7■■□□□ 1.22
PCDHB17P-201ENST00000539533 PPP4R2Q9NY27 417 aa22.7■■□□□ 1.22
PCDHB17P-201ENST00000539533 BLMP54132 1417 aaPredicted RBP22.7■■□□□ 1.22
PCDHB17P-201ENST00000539533 MTHFSP49914 203 aa22.69■■□□□ 1.22
PCDHB17P-201ENST00000539533 POLR3AO14802 1390 aaPredicted RBP22.68■■□□□ 1.22
PCDHB17P-201ENST00000539533 INSRP06213 1382 aa22.68■■□□□ 1.22
PCDHB17P-201ENST00000539533 CHD2O14647 1828 aaKnown RBP22.68■■□□□ 1.22
PCDHB17P-201ENST00000539533 CDC42BPGQ6DT37 1551 aa22.67■■□□□ 1.22
PCDHB17P-201ENST00000539533 RBM33Q96EV2 1170 aaKnown RBP22.65■■□□□ 1.22
PCDHB17P-201ENST00000539533 EDC4Q6P2E9 1401 aaKnown RBP22.64■■□□□ 1.22
PCDHB17P-201ENST00000539533 KIF20BQ96Q89 1820 aa22.64■■□□□ 1.21
PCDHB17P-201ENST00000539533 ANKRD26Q9UPS8 1709 aa22.64■■□□□ 1.21
PCDHB17P-201ENST00000539533 KDM4FA0A1W2PPD8 638 aa22.63■■□□□ 1.21
PCDHB17P-201ENST00000539533 ZNF692Q9BU19 519 aaPredicted RBP22.63■■□□□ 1.21
PCDHB17P-201ENST00000539533 ACEP12821 1306 aa22.63■■□□□ 1.21
PCDHB17P-201ENST00000539533 PLEKHG3A1L390 1219 aa22.62■■□□□ 1.21
PCDHB17P-201ENST00000539533 NME9Q86XW9 330 aa22.62■■□□□ 1.21
PCDHB17P-201ENST00000539533 TOPAZ1Q8N9V7 1692 aa22.62■■□□□ 1.21
PCDHB17P-201ENST00000539533 AKAP12Q02952 1782 aa22.61■■□□□ 1.21
PCDHB17P-201ENST00000539533 ERICH6Q7L0X2 663 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms