RNA–Protein interactions for RNA: ENST00000539021.1

PPME1-205, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 2

Gene PPME1, Length 4,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-205ENST00000539021 CEP152O94986 1710 aa11.04□□□□□ -0.64
PPME1-205ENST00000539021 CLTCL1P53675 1640 aa11.04□□□□□ -0.64
PPME1-205ENST00000539021 WDR63Q8IWG1 891 aa11.04□□□□□ -0.64
PPME1-205ENST00000539021 C22orf23Q9BZE7 217 aa11.04□□□□□ -0.64
PPME1-205ENST00000539021 NSD3Q9BZ95 1437 aa11.04□□□□□ -0.64
PPME1-205ENST00000539021 CHGAP10645 457 aaKnown RBP11.04□□□□□ -0.64
PPME1-205ENST00000539021 PLCH2O75038 1416 aa11.03□□□□□ -0.64
PPME1-205ENST00000539021 CHMP5Q9NZZ3 219 aa11.03□□□□□ -0.64
PPME1-205ENST00000539021 ADGRF5Q8IZF2 1346 aa11.03□□□□□ -0.64
PPME1-205ENST00000539021 KIF3BO15066 747 aa11.03□□□□□ -0.64
PPME1-205ENST00000539021 ZKSCAN2Q63HK3 967 aa11.03□□□□□ -0.64
PPME1-205ENST00000539021 NAP1L5Q96NT1 182 aaPredicted RBP11.03□□□□□ -0.64
PPME1-205ENST00000539021 MVPQ14764 893 aaKnown RBP11.03□□□□□ -0.64
PPME1-205ENST00000539021 HSCBQ8IWL3 235 aa11.03□□□□□ -0.64
PPME1-205ENST00000539021 ZMYM3Q14202 1370 aa11.02□□□□□ -0.64
PPME1-205ENST00000539021 XRCC6P12956 609 aaKnown RBP eCLIP11.02□□□□□ -0.64
PPME1-205ENST00000539021 PTPRTO14522 1441 aa11.02□□□□□ -0.65
PPME1-205ENST00000539021 PNNQ9H307 717 aaKnown RBP11.02□□□□□ -0.65
PPME1-205ENST00000539021 U2AF1L5P0DN76 240 aaPredicted RBP11.02□□□□□ -0.65
PPME1-205ENST00000539021 MTHFSP49914 203 aa11.02□□□□□ -0.65
PPME1-205ENST00000539021 U2AF1Q01081 240 aaKnown RBP eCLIP11.02□□□□□ -0.65
PPME1-205ENST00000539021 DZIP1LQ8IYY4 767 aaKnown RBP11.02□□□□□ -0.65
PPME1-205ENST00000539021 SLC12A5Q9H2X9 1139 aa11.01□□□□□ -0.65
PPME1-205ENST00000539021 TRAK1Q9UPV9 953 aa11.01□□□□□ -0.65
PPME1-205ENST00000539021 TRAK2O60296 914 aa11.01□□□□□ -0.65
PPME1-205ENST00000539021 SMC4Q9NTJ3 1288 aa11.01□□□□□ -0.65
PPME1-205ENST00000539021 ITPRIPQ8IWB1 547 aa11□□□□□ -0.65
PPME1-205ENST00000539021 PANK2Q9BZ23 570 aa11□□□□□ -0.65
PPME1-205ENST00000539021 ABCC1P33527 1531 aa11□□□□□ -0.65
PPME1-205ENST00000539021 KIAA1210Q9ULL0 1709 aa10.99□□□□□ -0.65
PPME1-205ENST00000539021 SHROOM2Q13796 1616 aa10.99□□□□□ -0.65
PPME1-205ENST00000539021 DDX11L8A8MPP1 907 aa10.99□□□□□ -0.65
PPME1-205ENST00000539021 TSR2Q969E8 191 aaKnown RBP10.98□□□□□ -0.65
PPME1-205ENST00000539021 MRE11P49959 708 aa10.98□□□□□ -0.65
PPME1-205ENST00000539021 CCDC27Q2M243 656 aa10.98□□□□□ -0.65
PPME1-205ENST00000539021 TET3O43151 1660 aa10.98□□□□□ -0.65
PPME1-205ENST00000539021 ABCA6Q8N139 1617 aa10.98□□□□□ -0.65
PPME1-205ENST00000539021 MAP3K4Q9Y6R4 1608 aa10.98□□□□□ -0.65
PPME1-205ENST00000539021 FSD2A1L4K1 749 aa10.98□□□□□ -0.65
PPME1-205ENST00000539021 DDX19BQ9UMR2 479 aa10.97□□□□□ -0.65
PPME1-205ENST00000539021 PHF23Q9BUL5 403 aaPredicted RBP10.97□□□□□ -0.65
PPME1-205ENST00000539021 UGGT1Q9NYU2 1555 aa10.97□□□□□ -0.65
PPME1-205ENST00000539021 U2SURPO15042 1029 aaKnown RBP10.97□□□□□ -0.65
PPME1-205ENST00000539021 HSP90AA1P07900 732 aaKnown RBP10.97□□□□□ -0.65
PPME1-205ENST00000539021 RTEL1-TNFRSF6BF6WH68 1400 aa10.97□□□□□ -0.65
PPME1-205ENST00000539021 MYOM2P54296 1465 aa10.96□□□□□ -0.65
PPME1-205ENST00000539021 IQSEC2Q5JU85 1478 aa10.96□□□□□ -0.65
PPME1-205ENST00000539021 HSP90AB1P08238 724 aaKnown RBP10.96□□□□□ -0.65
PPME1-205ENST00000539021 SBNO2Q9Y2G9 1366 aa10.96□□□□□ -0.66
PPME1-205ENST00000539021 EXOSC9Q06265 439 aaKnown RBP10.96□□□□□ -0.66
PPME1-205ENST00000539021 GLIPR1L2Q4G1C9 344 aa10.96□□□□□ -0.66
PPME1-205ENST00000539021 ZFYVE16Q7Z3T8 1539 aa10.96□□□□□ -0.66
PPME1-205ENST00000539021 TRIM44Q96DX7 344 aaPredicted RBP10.95□□□□□ -0.66
PPME1-205ENST00000539021 SHPRHQ149N8 1683 aa10.95□□□□□ -0.66
PPME1-205ENST00000539021 TRIM27P14373 513 aa10.95□□□□□ -0.66
PPME1-205ENST00000539021 CLCN1P35523 988 aa10.95□□□□□ -0.66
PPME1-205ENST00000539021 GRPEL1Q9HAV7 217 aa10.95□□□□□ -0.66
PPME1-205ENST00000539021 CT47B1P0C2W7 299 aaPredicted RBP10.94□□□□□ -0.66
PPME1-205ENST00000539021 HDAC1Q13547 482 aaPredicted RBP10.94□□□□□ -0.66
PPME1-205ENST00000539021 TMEM132EQ6IEE7 984 aa10.94□□□□□ -0.66
PPME1-205ENST00000539021 NOS1P29475 1434 aa10.94□□□□□ -0.66
PPME1-205ENST00000539021 ZNF518AQ6AHZ1 1483 aa10.94□□□□□ -0.66
PPME1-205ENST00000539021 ATF7IPQ6VMQ6 1270 aa10.94□□□□□ -0.66
PPME1-205ENST00000539021 GBP4Q96PP9 640 aa10.94□□□□□ -0.66
PPME1-205ENST00000539021 KIF1BO60333 1816 aa10.94□□□□□ -0.66
PPME1-205ENST00000539021 SSH1Q8WYL5 1049 aa10.94□□□□□ -0.66
PPME1-205ENST00000539021 LNPKQ9C0E8 428 aa10.93□□□□□ -0.66
PPME1-205ENST00000539021 NOB1Q9ULX3 412 aaKnown RBP10.93□□□□□ -0.66
PPME1-205ENST00000539021 ERCC6L2Q5T890 1561 aa10.92□□□□□ -0.66
PPME1-205ENST00000539021 IPO8O15397 1037 aaKnown RBP10.92□□□□□ -0.66
PPME1-205ENST00000539021 TMEM57Q8N5G2 664 aa10.92□□□□□ -0.66
PPME1-205ENST00000539021 DEPDC5O75140 1603 aa10.92□□□□□ -0.66
PPME1-205ENST00000539021 CHD1O14646 1710 aa10.92□□□□□ -0.66
PPME1-205ENST00000539021 ISY1Q9ULR0 285 aaKnown RBP10.92□□□□□ -0.66
PPME1-205ENST00000539021 ATP7AQ04656 1500 aa10.92□□□□□ -0.66
PPME1-205ENST00000539021 ZCCHC11Q5TAX3 1644 aaKnown RBP10.91□□□□□ -0.66
PPME1-205ENST00000539021 SMC5Q8IY18 1101 aa10.91□□□□□ -0.66
PPME1-205ENST00000539021 FOXD4L1Q9NU39 408 aa10.91□□□□□ -0.66
PPME1-205ENST00000539021 EVC2Q86UK5 1308 aa10.91□□□□□ -0.66
PPME1-205ENST00000539021 ESPNB1AK53 854 aa10.9□□□□□ -0.66
PPME1-205ENST00000539021 TMPOP42166 694 aaKnown RBP10.9□□□□□ -0.66
PPME1-205ENST00000539021 SAFB2Q14151 953 aaKnown RBP eCLIP10.9□□□□□ -0.66
PPME1-205ENST00000539021 TNPO1Q92973 898 aaKnown RBP10.9□□□□□ -0.66
PPME1-205ENST00000539021 HSP90AA2PQ14568 343 aaPredicted RBP10.9□□□□□ -0.66
PPME1-205ENST00000539021 KIF16BQ96L93 1317 aa10.9□□□□□ -0.66
PPME1-205ENST00000539021 MYO3AQ8NEV4 1616 aa10.9□□□□□ -0.66
PPME1-205ENST00000539021 NCBP3Q53F19 620 aaKnown RBP10.89□□□□□ -0.67
PPME1-205ENST00000539021 NEURL4Q96JN8 1562 aa10.89□□□□□ -0.67
PPME1-205ENST00000539021 C14orf93Q9H972 538 aaKnown RBP10.89□□□□□ -0.67
PPME1-205ENST00000539021 SKOR2Q2VWA4 1001 aaPredicted RBP10.89□□□□□ -0.67
PPME1-205ENST00000539021 CABP2Q9NPB3 220 aa10.89□□□□□ -0.67
PPME1-205ENST00000539021 CIZ1Q9ULV3 898 aaPredicted RBP10.89□□□□□ -0.67
PPME1-205ENST00000539021 QRICH2Q9H0J4 1663 aa10.89□□□□□ -0.67
PPME1-205ENST00000539021 NSD2O96028 1365 aa10.89□□□□□ -0.67
PPME1-205ENST00000539021 GOLGA6L22H0YM25 854 aa10.89□□□□□ -0.67
PPME1-205ENST00000539021 RBM25P49756 843 aaKnown RBP10.89□□□□□ -0.67
PPME1-205ENST00000539021 RIPK4P57078 832 aa10.89□□□□□ -0.67
PPME1-205ENST00000539021 SNX21Q969T3 373 aa10.89□□□□□ -0.67
PPME1-205ENST00000539021 ZNF692Q9BU19 519 aaPredicted RBP10.89□□□□□ -0.67
PPME1-205ENST00000539021 PTMSP20962 102 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms