RNA–Protein interactions for RNA: ENST00000538367.5

TRA2A-211, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-211ENST00000538367 MAP7D2Q96T17 732 aa22.57■■□□□ 1.2
TRA2A-211ENST00000538367 KIF13AQ9H1H9 1805 aa22.56■■□□□ 1.2
TRA2A-211ENST00000538367 AFAP1Q8N556 730 aa22.55■■□□□ 1.2
TRA2A-211ENST00000538367 ZFYVE16Q7Z3T8 1539 aa22.55■■□□□ 1.2
TRA2A-211ENST00000538367 IQGAP1P46940 1657 aa22.55■■□□□ 1.2
TRA2A-211ENST00000538367 SPAG9O60271 1321 aaKnown RBP22.55■■□□□ 1.2
TRA2A-211ENST00000538367 INO80Q9ULG1 1556 aaPredicted RBP22.55■■□□□ 1.2
TRA2A-211ENST00000538367 TSPOAP1O95153 1857 aa22.54■■□□□ 1.2
TRA2A-211ENST00000538367 SKOR2Q2VWA4 1001 aaPredicted RBP22.54■■□□□ 1.2
TRA2A-211ENST00000538367 KNSTRNQ9Y448 316 aa22.54■■□□□ 1.2
TRA2A-211ENST00000538367 ERBB4Q15303 1308 aa22.54■■□□□ 1.2
TRA2A-211ENST00000538367 AMER1Q5JTC6 1135 aaPredicted RBP22.54■■□□□ 1.2
TRA2A-211ENST00000538367 ZNF518AQ6AHZ1 1483 aa22.54■■□□□ 1.2
TRA2A-211ENST00000538367 ATP10AO60312 1499 aa22.52■■□□□ 1.2
TRA2A-211ENST00000538367 BCAR3O75815 825 aa22.52■■□□□ 1.2
TRA2A-211ENST00000538367 CIZ1Q9ULV3 898 aaPredicted RBP22.52■■□□□ 1.2
TRA2A-211ENST00000538367 ATP7AQ04656 1500 aa22.52■■□□□ 1.2
TRA2A-211ENST00000538367 DUOX2Q9NRD8 1548 aa22.52■■□□□ 1.2
TRA2A-211ENST00000538367 CDCA8Q53HL2 280 aa22.51■■□□□ 1.19
TRA2A-211ENST00000538367 GZF1Q9H116 711 aaPredicted RBP22.51■■□□□ 1.19
TRA2A-211ENST00000538367 PPRC1Q5VV67 1664 aaKnown RBP22.51■■□□□ 1.19
TRA2A-211ENST00000538367 NBPF1Q3BBV0 1214 aa22.51■■□□□ 1.19
TRA2A-211ENST00000538367 POGZQ7Z3K3 1410 aa22.5■■□□□ 1.19
TRA2A-211ENST00000538367 CCDC173Q0VFZ6 552 aa22.5■■□□□ 1.19
TRA2A-211ENST00000538367 DDIT3P35638 169 aa22.49■■□□□ 1.19
TRA2A-211ENST00000538367 ZNF692Q9BU19 519 aaPredicted RBP22.49■■□□□ 1.19
TRA2A-211ENST00000538367 IBTKQ9P2D0 1353 aaPredicted RBP22.48■■□□□ 1.19
TRA2A-211ENST00000538367 MYOM1P52179 1685 aa22.48■■□□□ 1.19
TRA2A-211ENST00000538367 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.48■■□□□ 1.19
TRA2A-211ENST00000538367 PPP1R9BQ96SB3 815 aa22.48■■□□□ 1.19
TRA2A-211ENST00000538367 IQGAP3Q86VI3 1631 aa22.47■■□□□ 1.19
TRA2A-211ENST00000538367 ARXQ96QS3 562 aa22.47■■□□□ 1.19
TRA2A-211ENST00000538367 KIDINS220Q9ULH0 1771 aa22.47■■□□□ 1.19
TRA2A-211ENST00000538367 HSCBQ8IWL3 235 aa22.46■■□□□ 1.19
TRA2A-211ENST00000538367 OFD1O75665 1012 aa22.46■■□□□ 1.19
TRA2A-211ENST00000538367 GBP4Q96PP9 640 aa22.46■■□□□ 1.19
TRA2A-211ENST00000538367 C22orf23Q9BZE7 217 aa22.46■■□□□ 1.19
TRA2A-211ENST00000538367 RWDD1Q9H446 243 aaPredicted RBP22.46■■□□□ 1.19
TRA2A-211ENST00000538367 PLA2R1Q13018 1463 aa22.46■■□□□ 1.19
TRA2A-211ENST00000538367 CANXP27824 592 aaKnown RBP22.45■■□□□ 1.18
TRA2A-211ENST00000538367 RICTORQ6R327 1708 aa22.45■■□□□ 1.18
TRA2A-211ENST00000538367 SNX21Q969T3 373 aa22.45■■□□□ 1.18
TRA2A-211ENST00000538367 SPINK5Q9NQ38 1064 aaPredicted RBP22.45■■□□□ 1.18
TRA2A-211ENST00000538367 PDZRN3Q9UPQ7 1066 aa22.45■■□□□ 1.18
TRA2A-211ENST00000538367 ZSCAN30Q86W11 494 aa22.44■■□□□ 1.18
TRA2A-211ENST00000538367 DNAJC5Q9H3Z4 198 aa22.44■■□□□ 1.18
TRA2A-211ENST00000538367 HECW2Q9P2P5 1572 aa22.44■■□□□ 1.18
TRA2A-211ENST00000538367 HS1BP3Q53T59 392 aa22.43■■□□□ 1.18
TRA2A-211ENST00000538367 KIAA1211Q6ZU35 1233 aa22.43■■□□□ 1.18
TRA2A-211ENST00000538367 MTERF4Q7Z6M4 381 aaKnown RBP22.43■■□□□ 1.18
TRA2A-211ENST00000538367 COG6Q9Y2V7 657 aa22.43■■□□□ 1.18
TRA2A-211ENST00000538367 APAF1O14727 1248 aa22.42■■□□□ 1.18
TRA2A-211ENST00000538367 SMC5Q8IY18 1101 aa22.42■■□□□ 1.18
TRA2A-211ENST00000538367 PODXL2Q9NZ53 605 aa22.42■■□□□ 1.18
TRA2A-211ENST00000538367 MLH3Q9UHC1 1453 aa22.42■■□□□ 1.18
TRA2A-211ENST00000538367 MADDQ8WXG6 1647 aa22.4■■□□□ 1.18
TRA2A-211ENST00000538367 ARHGAP31Q2M1Z3 1444 aa22.4■■□□□ 1.18
TRA2A-211ENST00000538367 PANK1Q8TE04 598 aa22.4■■□□□ 1.18
TRA2A-211ENST00000538367 KDM5AP29375 1690 aaKnown RBP22.39■■□□□ 1.18
TRA2A-211ENST00000538367 PRDM4Q9UKN5 801 aa22.39■■□□□ 1.18
TRA2A-211ENST00000538367 KANK1Q14678 1352 aa22.38■■□□□ 1.17
TRA2A-211ENST00000538367 ANP32BQ92688 251 aaKnown RBP22.37■■□□□ 1.17
TRA2A-211ENST00000538367 RAPGEF3O95398 923 aa22.37■■□□□ 1.17
TRA2A-211ENST00000538367 PCDHB15Q9Y5E8 787 aa22.37■■□□□ 1.17
TRA2A-211ENST00000538367 FRMPD1Q5SYB0 1578 aa22.36■■□□□ 1.17
TRA2A-211ENST00000538367 RAB3GAP1Q15042 981 aa22.36■■□□□ 1.17
TRA2A-211ENST00000538367 RBM25P49756 843 aaKnown RBP22.36■■□□□ 1.17
TRA2A-211ENST00000538367 NCBP3Q53F19 620 aaKnown RBP22.36■■□□□ 1.17
TRA2A-211ENST00000538367 SCAF11Q99590 1463 aaKnown RBP22.35■■□□□ 1.17
TRA2A-211ENST00000538367 POLR3AO14802 1390 aaPredicted RBP22.35■■□□□ 1.17
TRA2A-211ENST00000538367 RARSP54136 660 aaKnown RBP22.34■■□□□ 1.17
TRA2A-211ENST00000538367 CCDC146Q8IYE0 955 aa22.34■■□□□ 1.17
TRA2A-211ENST00000538367 STAC3Q96MF2 364 aa22.34■■□□□ 1.17
TRA2A-211ENST00000538367 ABCA6Q8N139 1617 aa22.34■■□□□ 1.17
TRA2A-211ENST00000538367 SLC24A1O60721 1099 aa22.34■■□□□ 1.17
TRA2A-211ENST00000538367 IQSEC2Q5JU85 1478 aa22.34■■□□□ 1.17
TRA2A-211ENST00000538367 CLEC17AQ6ZS10 378 aa22.34■■□□□ 1.17
TRA2A-211ENST00000538367 SMAP1Q8IYB5 467 aaPredicted RBP22.34■■□□□ 1.17
TRA2A-211ENST00000538367 MSNP26038 577 aaKnown RBP22.33■■□□□ 1.17
TRA2A-211ENST00000538367 GAS2L3Q86XJ1 694 aa22.33■■□□□ 1.17
TRA2A-211ENST00000538367 KIAA1210Q9ULL0 1709 aa22.33■■□□□ 1.17
TRA2A-211ENST00000538367 DEPDC5O75140 1603 aa22.33■■□□□ 1.16
TRA2A-211ENST00000538367 WWC1Q8IX03 1113 aa22.33■■□□□ 1.16
TRA2A-211ENST00000538367 TNPO1Q92973 898 aaKnown RBP22.33■■□□□ 1.16
TRA2A-211ENST00000538367 CEP152O94986 1710 aa22.32■■□□□ 1.16
TRA2A-211ENST00000538367 SPHKAPQ2M3C7 1700 aa22.32■■□□□ 1.16
TRA2A-211ENST00000538367 NASPP49321 788 aaPredicted RBP22.31■■□□□ 1.16
TRA2A-211ENST00000538367 SPRYD3Q8NCJ5 442 aa22.31■■□□□ 1.16
TRA2A-211ENST00000538367 RIPK4P57078 832 aa22.3■■□□□ 1.16
TRA2A-211ENST00000538367 SHPRHQ149N8 1683 aa22.3■■□□□ 1.16
TRA2A-211ENST00000538367 ZNF500O60304 480 aaPredicted RBP22.3■■□□□ 1.16
TRA2A-211ENST00000538367 DIP2CQ9Y2E4 1556 aa22.29■■□□□ 1.16
TRA2A-211ENST00000538367 HDAC1Q13547 482 aaPredicted RBP22.29■■□□□ 1.16
TRA2A-211ENST00000538367 WDR63Q8IWG1 891 aa22.29■■□□□ 1.16
TRA2A-211ENST00000538367 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.29■■□□□ 1.166e-8■■□□□ 13.6
TRA2A-211ENST00000538367 PHF23Q9BUL5 403 aaPredicted RBP22.29■■□□□ 1.16
TRA2A-211ENST00000538367 MFAP1P55081 439 aaKnown RBP22.28■■□□□ 1.16
TRA2A-211ENST00000538367 GOLGA6L22H0YM25 854 aa22.28■■□□□ 1.16
TRA2A-211ENST00000538367 RGL3Q3MIN7 710 aa22.28■■□□□ 1.16
TRA2A-211ENST00000538367 DMRT2Q9Y5R5 561 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms