RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 ZFYVE9O95405 1425 aa24.42■■□□□ 1.5
HTATSF1-204ENST00000535601 PLEKHH1Q9ULM0 1364 aa24.42■■□□□ 1.5
HTATSF1-204ENST00000535601 PTPRMP28827 1452 aa24.4■■□□□ 1.5
HTATSF1-204ENST00000535601 MORC1Q86VD1 984 aa24.39■■□□□ 1.5
HTATSF1-204ENST00000535601 SLC24A1O60721 1099 aa24.39■■□□□ 1.49
HTATSF1-204ENST00000535601 TXNDC2Q86VQ3 553 aa24.37■■□□□ 1.49
HTATSF1-204ENST00000535601 B4GALNT3Q6L9W6 998 aa24.37■■□□□ 1.49
HTATSF1-204ENST00000535601 TNRQ92752 1358 aa24.36■■□□□ 1.49
HTATSF1-204ENST00000535601 METP08581 1390 aa24.35■■□□□ 1.49
HTATSF1-204ENST00000535601 CDK19Q9BWU1 502 aa24.35■■□□□ 1.49
HTATSF1-204ENST00000535601 BLMP54132 1417 aaPredicted RBP24.34■■□□□ 1.49
HTATSF1-204ENST00000535601 GGNBP2Q9H3C7 697 aa24.33■■□□□ 1.49
HTATSF1-204ENST00000535601 NCKAP5LQ9HCH0 1330 aa24.32■■□□□ 1.48
HTATSF1-204ENST00000535601 A0A1W2PP64 1363 aa24.32■■□□□ 1.48
HTATSF1-204ENST00000535601 NPC1L1Q9UHC9 1359 aa24.31■■□□□ 1.48
HTATSF1-204ENST00000535601 CABP1Q9NZU7 370 aa24.31■■□□□ 1.48
HTATSF1-204ENST00000535601 LTKP29376 864 aa24.29■■□□□ 1.48
HTATSF1-204ENST00000535601 FBLN1P23142 703 aa24.29■■□□□ 1.48
HTATSF1-204ENST00000535601 TSHZ2Q9NRE2 1034 aa24.29■■□□□ 1.48
HTATSF1-204ENST00000535601 CGNL1Q0VF96 1302 aa24.29■■□□□ 1.48
HTATSF1-204ENST00000535601 APAF1O14727 1248 aa24.29■■□□□ 1.48
HTATSF1-204ENST00000535601 NUTM2FA1L443 756 aa24.28■■□□□ 1.48
HTATSF1-204ENST00000535601 MTHFSP49914 203 aa24.28■■□□□ 1.48
HTATSF1-204ENST00000535601 SLC26A8Q96RN1 970 aa24.28■■□□□ 1.48
HTATSF1-204ENST00000535601 NRXN3Q9Y4C0 1643 aa24.27■■□□□ 1.48
HTATSF1-204ENST00000535601 ANKRD36BQ8N2N9 1353 aa24.27■■□□□ 1.48
HTATSF1-204ENST00000535601 NEUROD2Q15784 382 aa24.27■■□□□ 1.47
HTATSF1-204ENST00000535601 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.27■■□□□ 1.47
HTATSF1-204ENST00000535601 PLIN1O60240 522 aa24.26■■□□□ 1.47
HTATSF1-204ENST00000535601 SETD1AO15047 1707 aaKnown RBP24.26■■□□□ 1.47
HTATSF1-204ENST00000535601 RRP7AQ9Y3A4 280 aaKnown RBP24.24■■□□□ 1.47
HTATSF1-204ENST00000535601 RCAN3Q9UKA8 241 aa24.24■■□□□ 1.47
HTATSF1-204ENST00000535601 UBR1Q8IWV7 1749 aa24.22■■□□□ 1.47
HTATSF1-204ENST00000535601 TMEM2Q9UHN6 1383 aa24.22■■□□□ 1.47
HTATSF1-204ENST00000535601 DMRT2Q9Y5R5 561 aa24.22■■□□□ 1.47
HTATSF1-204ENST00000535601 PPP4R2Q9NY27 417 aa24.22■■□□□ 1.47
HTATSF1-204ENST00000535601 SPINK5Q9NQ38 1064 aaPredicted RBP24.21■■□□□ 1.47
HTATSF1-204ENST00000535601 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.21■■□□□ 1.47
HTATSF1-204ENST00000535601 CD163L1Q9NR16 1453 aa24.2■■□□□ 1.46
HTATSF1-204ENST00000535601 FYB1O15117 783 aa24.19■■□□□ 1.46
HTATSF1-204ENST00000535601 C3P01024 1663 aa24.18■■□□□ 1.46
HTATSF1-204ENST00000535601 ATAD2Q6PL18 1390 aa24.17■■□□□ 1.46
HTATSF1-204ENST00000535601 RRP1P56182 461 aaKnown RBP24.16■■□□□ 1.46
HTATSF1-204ENST00000535601 TERF2IPQ9NYB0 399 aa24.16■■□□□ 1.46
HTATSF1-204ENST00000535601 RNF123Q5XPI4 1314 aa24.16■■□□□ 1.46
HTATSF1-204ENST00000535601 FER1L4A9Z1Z3 1794 aa24.16■■□□□ 1.46
HTATSF1-204ENST00000535601 ZRANB1Q9UGI0 708 aa24.16■■□□□ 1.46
HTATSF1-204ENST00000535601 PPM1GO15355 546 aaPredicted RBP24.15■■□□□ 1.46
HTATSF1-204ENST00000535601 PDE3BQ13370 1112 aa24.15■■□□□ 1.46
HTATSF1-204ENST00000535601 ABCC11Q96J66 1382 aa24.15■■□□□ 1.46
HTATSF1-204ENST00000535601 EXOC6Q8TAG9 804 aa24.14■■□□□ 1.45
HTATSF1-204ENST00000535601 ROBO2Q9HCK4 1378 aa24.14■■□□□ 1.45
HTATSF1-204ENST00000535601 HDGFL2Q7Z4V5 671 aaPredicted RBP24.13■■□□□ 1.45
HTATSF1-204ENST00000535601 PRKCSHP14314 528 aaPredicted RBP24.13■■□□□ 1.45
HTATSF1-204ENST00000535601 PUS7Q96PZ0 661 aaKnown RBP24.13■■□□□ 1.45
HTATSF1-204ENST00000535601 SHPRHQ149N8 1683 aa24.13■■□□□ 1.45
HTATSF1-204ENST00000535601 POLR3AO14802 1390 aaPredicted RBP24.13■■□□□ 1.45
HTATSF1-204ENST00000535601 WASLO00401 505 aaPredicted RBP24.13■■□□□ 1.45
HTATSF1-204ENST00000535601 HDGFP51858 240 aaKnown RBP24.11■■□□□ 1.45
HTATSF1-204ENST00000535601 ADAMTS13Q76LX8 1427 aa24.11■■□□□ 1.45
HTATSF1-204ENST00000535601 U2SURPO15042 1029 aaKnown RBP24.11■■□□□ 1.45
HTATSF1-204ENST00000535601 U2AF1L5P0DN76 240 aaPredicted RBP24.11■■□□□ 1.45
HTATSF1-204ENST00000535601 U2AF1Q01081 240 aaKnown RBP eCLIP24.11■■□□□ 1.45
HTATSF1-204ENST00000535601 GOLGA2Q08379 1002 aa24.11■■□□□ 1.45
HTATSF1-204ENST00000535601 DUSP27Q5VZP5 1158 aa24.11■■□□□ 1.45
HTATSF1-204ENST00000535601 ZNF521Q96K83 1311 aa24.1■■□□□ 1.45
HTATSF1-204ENST00000535601 NUDT16Q96DE0 195 aaKnown RBP24.09■■□□□ 1.45
HTATSF1-204ENST00000535601 USP32Q8NFA0 1604 aa24.09■■□□□ 1.45
HTATSF1-204ENST00000535601 NME9Q86XW9 330 aa24.08■■□□□ 1.45
HTATSF1-204ENST00000535601 C20orf194Q5TEA3 1177 aa24.08■■□□□ 1.45
HTATSF1-204ENST00000535601 PPIP5K1Q6PFW1 1433 aa24.08■■□□□ 1.44
HTATSF1-204ENST00000535601 CCDC136Q96JN2 1154 aa24.08■■□□□ 1.44
HTATSF1-204ENST00000535601 PRR36Q9H6K5 1346 aa24.07■■□□□ 1.44
HTATSF1-204ENST00000535601 EID1Q9Y6B2 187 aa24.07■■□□□ 1.44
HTATSF1-204ENST00000535601 DLC1Q96QB1 1528 aa24.06■■□□□ 1.44
HTATSF1-204ENST00000535601 INSRP06213 1382 aa24.06■■□□□ 1.44
HTATSF1-204ENST00000535601 TCP11L2Q8N4U5 519 aa24.06■■□□□ 1.44
HTATSF1-204ENST00000535601 RBM33Q96EV2 1170 aaKnown RBP24.06■■□□□ 1.44
HTATSF1-204ENST00000535601 CFAP53Q96M91 514 aa24.06■■□□□ 1.44
HTATSF1-204ENST00000535601 NLRP1Q9C000 1473 aa24.05■■□□□ 1.44
HTATSF1-204ENST00000535601 PTPRUQ92729 1446 aa24.05■■□□□ 1.44
HTATSF1-204ENST00000535601 SLFN5Q08AF3 891 aa24.04■■□□□ 1.44
HTATSF1-204ENST00000535601 ERICH6BQ5W0A0 696 aa24.04■■□□□ 1.44
HTATSF1-204ENST00000535601 NINLQ9Y2I6 1382 aa24.03■■□□□ 1.44
HTATSF1-204ENST00000535601 AMOTL2Q9Y2J4 779 aa24.03■■□□□ 1.44
HTATSF1-204ENST00000535601 WWC1Q8IX03 1113 aa24.02■■□□□ 1.44
HTATSF1-204ENST00000535601 NSD2O96028 1365 aa24.01■■□□□ 1.43
HTATSF1-204ENST00000535601 PLEKHG1Q9ULL1 1385 aa24.01■■□□□ 1.43
HTATSF1-204ENST00000535601 SOX12O15370 315 aa24■■□□□ 1.43
HTATSF1-204ENST00000535601 RUNDC1Q96C34 613 aa24■■□□□ 1.43
HTATSF1-204ENST00000535601 SIPA1L2Q9P2F8 1722 aaPredicted RBP24■■□□□ 1.43
HTATSF1-204ENST00000535601 EMILIN1Q9Y6C2 1016 aa24■■□□□ 1.43
HTATSF1-204ENST00000535601 RIMS1Q86UR5 1692 aaKnown RBP23.99■■□□□ 1.43
HTATSF1-204ENST00000535601 CRBNQ96SW2 442 aa23.99■■□□□ 1.43
HTATSF1-204ENST00000535601 CCDC61Q9Y6R9 512 aa23.99■■□□□ 1.43
HTATSF1-204ENST00000535601 BCAR3O75815 825 aa23.98■■□□□ 1.43
HTATSF1-204ENST00000535601 RRS1Q15050 365 aaKnown RBP23.98■■□□□ 1.43
HTATSF1-204ENST00000535601 PMFBP1Q8TBY8 1022 aa23.98■■□□□ 1.43
HTATSF1-204ENST00000535601 KIF20BQ96Q89 1820 aa23.98■■□□□ 1.43
HTATSF1-204ENST00000535601 THEMISQ8N1K5 641 aaPredicted RBP23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms