RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 MYOM1P52179 1685 aa31.65■■■□□ 2.66
RBFOX1-206ENST00000535565 HSPA2P54652 639 aa31.64■■■□□ 2.66
RBFOX1-206ENST00000535565 MINK1Q8N4C8 1332 aaPredicted RBP31.64■■■□□ 2.66
RBFOX1-206ENST00000535565 ROBO2Q9HCK4 1378 aa31.64■■■□□ 2.66
RBFOX1-206ENST00000535565 PLEKHH1Q9ULM0 1364 aa31.64■■■□□ 2.66
RBFOX1-206ENST00000535565 PUS7Q96PZ0 661 aaKnown RBP31.61■■■□□ 2.65
RBFOX1-206ENST00000535565 STRCQ7RTU9 1775 aa31.57■■■□□ 2.64
RBFOX1-206ENST00000535565 MIER1Q8N108 512 aa31.56■■■□□ 2.64
RBFOX1-206ENST00000535565 ADGRB2O60241 1585 aa31.56■■■□□ 2.64
RBFOX1-206ENST00000535565 ANP32CO43423 234 aa31.56■■■□□ 2.64
RBFOX1-206ENST00000535565 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.54■■■□□ 2.64
RBFOX1-206ENST00000535565 NWD1Q149M9 1564 aa31.54■■■□□ 2.64
RBFOX1-206ENST00000535565 SRPK2P78362 688 aaKnown RBP31.54■■■□□ 2.64
RBFOX1-206ENST00000535565 KCNA6P17658 529 aa31.53■■■□□ 2.64
RBFOX1-206ENST00000535565 ATAD2Q6PL18 1390 aa31.51■■■□□ 2.64
RBFOX1-206ENST00000535565 CABP2Q9NPB3 220 aa31.51■■■□□ 2.63
RBFOX1-206ENST00000535565 CDK19Q9BWU1 502 aa31.5■■■□□ 2.63
RBFOX1-206ENST00000535565 PANK3Q9H999 370 aa31.49■■■□□ 2.63
RBFOX1-206ENST00000535565 NINLQ9Y2I6 1382 aa31.47■■■□□ 2.63
RBFOX1-206ENST00000535565 WASLO00401 505 aaPredicted RBP31.47■■■□□ 2.63
RBFOX1-206ENST00000535565 TMC1Q8TDI8 760 aa31.45■■■□□ 2.63
RBFOX1-206ENST00000535565 NKTRP30414 1462 aaKnown RBP31.43■■■□□ 2.62
RBFOX1-206ENST00000535565 NALCNQ8IZF0 1738 aa31.4■■■□□ 2.62
RBFOX1-206ENST00000535565 PER1O15534 1290 aaPredicted RBP31.39■■■□□ 2.62
RBFOX1-206ENST00000535565 SLC12A5Q9H2X9 1139 aa31.39■■■□□ 2.61
RBFOX1-206ENST00000535565 KNSTRNQ9Y448 316 aa31.37■■■□□ 2.61
RBFOX1-206ENST00000535565 STRCP1A6NGW2 1772 aa31.36■■■□□ 2.61
RBFOX1-206ENST00000535565 ANKRD36BQ8N2N9 1353 aa31.35■■■□□ 2.61
RBFOX1-206ENST00000535565 PRKRIP1Q9H875 184 aaPredicted RBP31.34■■■□□ 2.61
RBFOX1-206ENST00000535565 CDC42BPGQ6DT37 1551 aa31.34■■■□□ 2.61
RBFOX1-206ENST00000535565 ATP7BP35670 1465 aa31.34■■■□□ 2.61
RBFOX1-206ENST00000535565 ITSN1Q15811 1721 aa31.33■■■□□ 2.61
RBFOX1-206ENST00000535565 DMRT2Q9Y5R5 561 aa31.33■■■□□ 2.61
RBFOX1-206ENST00000535565 ADGRL3Q9HAR2 1447 aa31.33■■■□□ 2.61
RBFOX1-206ENST00000535565 FMN2Q9NZ56 1722 aa31.32■■■□□ 2.6
RBFOX1-206ENST00000535565 TOPAZ1Q8N9V7 1692 aa31.32■■■□□ 2.6
RBFOX1-206ENST00000535565 NUDT16Q96DE0 195 aaKnown RBP31.32■■■□□ 2.6
RBFOX1-206ENST00000535565 KTN1Q86UP2 1357 aaKnown RBP31.32■■■□□ 2.6
RBFOX1-206ENST00000535565 PPIP5K1Q6PFW1 1433 aa31.3■■■□□ 2.6
RBFOX1-206ENST00000535565 PROSER2Q86WR7 435 aaPredicted RBP31.3■■■□□ 2.6
RBFOX1-206ENST00000535565 TERF2IPQ9NYB0 399 aa31.3■■■□□ 2.6
RBFOX1-206ENST00000535565 USP32Q8NFA0 1604 aa31.29■■■□□ 2.6
RBFOX1-206ENST00000535565 CCDC61Q9Y6R9 512 aa31.29■■■□□ 2.6
RBFOX1-206ENST00000535565 CABP1Q9NZU7 370 aa31.28■■■□□ 2.6
RBFOX1-206ENST00000535565 CCER2I3L3R5 266 aa31.27■■■□□ 2.6
RBFOX1-206ENST00000535565 CNGB1Q14028 1251 aaPredicted RBP31.27■■■□□ 2.6
RBFOX1-206ENST00000535565 HDGFL2Q7Z4V5 671 aaPredicted RBP31.27■■■□□ 2.6
RBFOX1-206ENST00000535565 C14orf37Q86TY3 774 aa31.27■■■□□ 2.6
RBFOX1-206ENST00000535565 NSD3Q9BZ95 1437 aa31.27■■■□□ 2.6
RBFOX1-206ENST00000535565 A0A1W2PP64 1363 aa31.26■■■□□ 2.6
RBFOX1-206ENST00000535565 CARD14Q9BXL6 1004 aa31.26■■■□□ 2.6
RBFOX1-206ENST00000535565 NPC1L1Q9UHC9 1359 aa31.26■■■□□ 2.59
RBFOX1-206ENST00000535565 ANKARQ7Z5J8 1434 aa31.25■■■□□ 2.59
RBFOX1-206ENST00000535565 PRR36Q9H6K5 1346 aa31.25■■■□□ 2.59
RBFOX1-206ENST00000535565 CD163L1Q9NR16 1453 aa31.25■■■□□ 2.59
RBFOX1-206ENST00000535565 RGPD8O14715 1765 aaPredicted RBP31.25■■■□□ 2.59
RBFOX1-206ENST00000535565 RALBP1Q15311 655 aa31.25■■■□□ 2.59
RBFOX1-206ENST00000535565 RBM33Q96EV2 1170 aaKnown RBP31.24■■■□□ 2.59
RBFOX1-206ENST00000535565 NCOA3Q9Y6Q9 1424 aa31.23■■■□□ 2.59
RBFOX1-206ENST00000535565 AKAP12Q02952 1782 aa31.23■■■□□ 2.59
RBFOX1-206ENST00000535565 AMER1Q5JTC6 1135 aaPredicted RBP31.22■■■□□ 2.59
RBFOX1-206ENST00000535565 CC2D1BQ5T0F9 858 aaKnown RBP31.22■■■□□ 2.59
RBFOX1-206ENST00000535565 PARD3Q8TEW0 1356 aa31.21■■■□□ 2.59
RBFOX1-206ENST00000535565 NUTM2FA1L443 756 aa31.21■■■□□ 2.59
RBFOX1-206ENST00000535565 MON2Q7Z3U7 1717 aa31.19■■■□□ 2.58
RBFOX1-206ENST00000535565 CGNL1Q0VF96 1302 aa31.18■■■□□ 2.58
RBFOX1-206ENST00000535565 TMEM94Q12767 1356 aa31.18■■■□□ 2.58
RBFOX1-206ENST00000535565 CPSF1Q10570 1443 aaKnown RBP31.17■■■□□ 2.58
RBFOX1-206ENST00000535565 ZNF335Q9H4Z2 1342 aaPredicted RBP31.16■■■□□ 2.58
RBFOX1-206ENST00000535565 PLEKHG3A1L390 1219 aa31.15■■■□□ 2.58
RBFOX1-206ENST00000535565 C19orf44Q9H6X5 657 aa31.15■■■□□ 2.58
RBFOX1-206ENST00000535565 XIRP1Q702N8 1843 aaKnown RBP31.15■■■□□ 2.58
RBFOX1-206ENST00000535565 KIF20BQ96Q89 1820 aa31.15■■■□□ 2.58
RBFOX1-206ENST00000535565 MYBBP1AQ9BQG0 1328 aaKnown RBP31.14■■■□□ 2.58
RBFOX1-206ENST00000535565 NSD2O96028 1365 aa31.14■■■□□ 2.58
RBFOX1-206ENST00000535565 ZNF692Q9BU19 519 aaPredicted RBP31.13■■■□□ 2.57
RBFOX1-206ENST00000535565 DCCP43146 1447 aa31.12■■■□□ 2.57
RBFOX1-206ENST00000535565 ANKRD26Q9UPS8 1709 aa31.11■■■□□ 2.57
RBFOX1-206ENST00000535565 EDC4Q6P2E9 1401 aaKnown RBP31.11■■■□□ 2.57
RBFOX1-206ENST00000535565 LRRC7Q96NW7 1537 aa31.11■■■□□ 2.57
RBFOX1-206ENST00000535565 ACEP12821 1306 aa31.09■■■□□ 2.57
RBFOX1-206ENST00000535565 MSH6P52701 1360 aa31.08■■■□□ 2.57
RBFOX1-206ENST00000535565 POLR3AO14802 1390 aaPredicted RBP31.07■■■□□ 2.56
RBFOX1-206ENST00000535565 NRKQ7Z2Y5 1582 aa31.07■■■□□ 2.56
RBFOX1-206ENST00000535565 ATF3P18847 181 aa31.06■■■□□ 2.56
RBFOX1-206ENST00000535565 AEBP2Q6ZN18 517 aaPredicted RBP31.05■■■□□ 2.56
RBFOX1-206ENST00000535565 NGDNQ8NEJ9 315 aaKnown RBP31.05■■■□□ 2.56
RBFOX1-206ENST00000535565 PMFBP1Q8TBY8 1022 aa31.05■■■□□ 2.56
RBFOX1-206ENST00000535565 NLRP13Q86W25 1043 aa31.04■■■□□ 2.56
RBFOX1-206ENST00000535565 MRS2Q9HD23 443 aa31.04■■■□□ 2.56
RBFOX1-206ENST00000535565 USP6P35125 1406 aa31.03■■■□□ 2.56
RBFOX1-206ENST00000535565 BRD4O60885 1362 aaPredicted RBP31.02■■■□□ 2.56
RBFOX1-206ENST00000535565 MORC1Q86VD1 984 aa31.02■■■□□ 2.56
RBFOX1-206ENST00000535565 CADPS2Q86UW7 1296 aa31.01■■■□□ 2.56
RBFOX1-206ENST00000535565 PHF8Q9UPP1 1060 aa31.01■■■□□ 2.56
RBFOX1-206ENST00000535565 KIF1AQ12756 1690 aa31.01■■■□□ 2.55
RBFOX1-206ENST00000535565 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31■■■□□ 2.55
RBFOX1-206ENST00000535565 ESCO1Q5FWF5 840 aa31■■■□□ 2.55
RBFOX1-206ENST00000535565 FYB1O15117 783 aa30.99■■■□□ 2.55
RBFOX1-206ENST00000535565 C1orf167Q5SNV9 1468 aa30.99■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms