RNA–Protein interactions for RNA: ENST00000535458.6

KPNB1-202, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2 BASIC

Gene KPNB1, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-202ENST00000535458 NFKBIBQ15653 356 aa11.46□□□□□ -0.57
KPNB1-202ENST00000535458 KIDINS220Q9ULH0 1771 aa11.46□□□□□ -0.57
KPNB1-202ENST00000535458 POLR3AO14802 1390 aaPredicted RBP11.46□□□□□ -0.58
KPNB1-202ENST00000535458 GSE1Q14687 1217 aa11.46□□□□□ -0.58
KPNB1-202ENST00000535458 C8orf34Q49A92 452 aa11.46□□□□□ -0.58
KPNB1-202ENST00000535458 MYO3AQ8NEV4 1616 aa11.45□□□□□ -0.58
KPNB1-202ENST00000535458 FRAT1Q92837 279 aaPredicted RBP11.45□□□□□ -0.58
KPNB1-202ENST00000535458 USP35Q9P2H5 1018 aa11.45□□□□□ -0.58
KPNB1-202ENST00000535458 MORC1Q86VD1 984 aa11.45□□□□□ -0.58
KPNB1-202ENST00000535458 WWC1Q8IX03 1113 aa11.45□□□□□ -0.58
KPNB1-202ENST00000535458 TNNT2P45379 298 aaPredicted RBP11.44□□□□□ -0.58
KPNB1-202ENST00000535458 SLC12A5Q9H2X9 1139 aa11.44□□□□□ -0.58
KPNB1-202ENST00000535458 NSD3Q9BZ95 1437 aa11.44□□□□□ -0.58
KPNB1-202ENST00000535458 LMTK2Q8IWU2 1503 aa11.44□□□□□ -0.58
KPNB1-202ENST00000535458 ADGRB3O60242 1522 aa11.44□□□□□ -0.58
KPNB1-202ENST00000535458 C14orf93Q9H972 538 aaKnown RBP11.43□□□□□ -0.58
KPNB1-202ENST00000535458 SETBP1Q9Y6X0 1596 aa11.43□□□□□ -0.58
KPNB1-202ENST00000535458 CD109Q6YHK3 1445 aa11.43□□□□□ -0.58
KPNB1-202ENST00000535458 TRHP20396 242 aaPredicted RBP11.43□□□□□ -0.58
KPNB1-202ENST00000535458 TMEM132EQ6IEE7 984 aa11.43□□□□□ -0.58
KPNB1-202ENST00000535458 GGT6Q6P531 493 aa11.43□□□□□ -0.58
KPNB1-202ENST00000535458 ZNF518AQ6AHZ1 1483 aa11.43□□□□□ -0.58
KPNB1-202ENST00000535458 NEUROD2Q15784 382 aa11.42□□□□□ -0.58
KPNB1-202ENST00000535458 CFAP65Q6ZU64 1925 aaKnown RBP11.42□□□□□ -0.58
KPNB1-202ENST00000535458 IGHDP01880 384 aa11.42□□□□□ -0.58
KPNB1-202ENST00000535458 PDE3AQ14432 1141 aa11.42□□□□□ -0.58
KPNB1-202ENST00000535458 RRP7AQ9Y3A4 280 aaKnown RBP11.42□□□□□ -0.58
KPNB1-202ENST00000535458 NPATQ14207 1427 aa11.42□□□□□ -0.58
KPNB1-202ENST00000535458 FRAT2O75474 233 aaPredicted RBP11.41□□□□□ -0.58
KPNB1-202ENST00000535458 CANXP27824 592 aaKnown RBP11.41□□□□□ -0.58
KPNB1-202ENST00000535458 CGNL1Q0VF96 1302 aa11.41□□□□□ -0.58
KPNB1-202ENST00000535458 RUNDC1Q96C34 613 aa11.41□□□□□ -0.58
KPNB1-202ENST00000535458 PANK1Q8TE04 598 aa11.4□□□□□ -0.58
KPNB1-202ENST00000535458 COG6Q9Y2V7 657 aa11.4□□□□□ -0.58
KPNB1-202ENST00000535458 QRICH2Q9H0J4 1663 aa11.4□□□□□ -0.58
KPNB1-202ENST00000535458 TCP11L2Q8N4U5 519 aa11.4□□□□□ -0.59
KPNB1-202ENST00000535458 SHPRHQ149N8 1683 aa11.4□□□□□ -0.59
KPNB1-202ENST00000535458 PPLO60437 1756 aa11.39□□□□□ -0.59
KPNB1-202ENST00000535458 CLUAP1Q96AJ1 413 aa11.39□□□□□ -0.59
KPNB1-202ENST00000535458 ADGRB1O14514 1584 aa11.39□□□□□ -0.59
KPNB1-202ENST00000535458 MTHFSP49914 203 aa11.39□□□□□ -0.59
KPNB1-202ENST00000535458 NINLQ9Y2I6 1382 aa11.39□□□□□ -0.59
KPNB1-202ENST00000535458 ZC3H13Q5T200 1668 aaKnown RBP11.39□□□□□ -0.59
KPNB1-202ENST00000535458 SLKQ9H2G2 1235 aaPredicted RBP11.38□□□□□ -0.59
KPNB1-202ENST00000535458 CFAP74Q9C0B2 1584 aa11.38□□□□□ -0.59
KPNB1-202ENST00000535458 RPGRIP1LQ68CZ1 1315 aa11.38□□□□□ -0.59
KPNB1-202ENST00000535458 RARSP54136 660 aaKnown RBP11.38□□□□□ -0.59
KPNB1-202ENST00000535458 NUTM2DQ5VT03 806 aaPredicted RBP11.38□□□□□ -0.59
KPNB1-202ENST00000535458 FRMPD1Q5SYB0 1578 aa11.37□□□□□ -0.59
KPNB1-202ENST00000535458 CFAP53Q96M91 514 aa11.37□□□□□ -0.59
KPNB1-202ENST00000535458 POGZQ7Z3K3 1410 aa11.37□□□□□ -0.59
KPNB1-202ENST00000535458 IQSEC2Q5JU85 1478 aa11.36□□□□□ -0.59
KPNB1-202ENST00000535458 WDR63Q8IWG1 891 aa11.36□□□□□ -0.59
KPNB1-202ENST00000535458 MLH3Q9UHC1 1453 aa11.36□□□□□ -0.59
KPNB1-202ENST00000535458 EVC2Q86UK5 1308 aa11.35□□□□□ -0.59
KPNB1-202ENST00000535458 SPRYD3Q8NCJ5 442 aa11.35□□□□□ -0.59
KPNB1-202ENST00000535458 NEO1Q92859 1461 aa11.35□□□□□ -0.59
KPNB1-202ENST00000535458 RICTORQ6R327 1708 aa11.35□□□□□ -0.59
KPNB1-202ENST00000535458 USP32Q8NFA0 1604 aa11.35□□□□□ -0.59
KPNB1-202ENST00000535458 ABCC3O15438 1527 aa11.34□□□□□ -0.59
KPNB1-202ENST00000535458 BCL2L13Q9BXK5 485 aa11.34□□□□□ -0.59
KPNB1-202ENST00000535458 TNNQ9UQP3 1299 aa11.34□□□□□ -0.59
KPNB1-202ENST00000535458 MAPK8IP3Q9UPT6 1336 aa11.34□□□□□ -0.59
KPNB1-202ENST00000535458 VGFO15240 615 aaPredicted RBP11.34□□□□□ -0.59
KPNB1-202ENST00000535458 CCDC27Q2M243 656 aa11.34□□□□□ -0.59
KPNB1-202ENST00000535458 HECW2Q9P2P5 1572 aa11.34□□□□□ -0.59
KPNB1-202ENST00000535458 RLBP1P12271 317 aa11.34□□□□□ -0.59
KPNB1-202ENST00000535458 PUS7Q96PZ0 661 aaKnown RBP11.34□□□□□ -0.59
KPNB1-202ENST00000535458 CABP2Q9NPB3 220 aa11.34□□□□□ -0.59
KPNB1-202ENST00000535458 U2AF1L5P0DN76 240 aaPredicted RBP11.33□□□□□ -0.6
KPNB1-202ENST00000535458 U2AF1Q01081 240 aaKnown RBP eCLIP11.33□□□□□ -0.69e-6■□□□□ 9.4
KPNB1-202ENST00000535458 ANKRD36BQ8N2N9 1353 aa11.33□□□□□ -0.6
KPNB1-202ENST00000535458 SAFB2Q14151 953 aaKnown RBP eCLIP11.33□□□□□ -0.6
KPNB1-202ENST00000535458 PMFBP1Q8TBY8 1022 aa11.33□□□□□ -0.6
KPNB1-202ENST00000535458 USP19O94966 1318 aa11.33□□□□□ -0.6
KPNB1-202ENST00000535458 TULP4Q9NRJ4 1543 aa11.32□□□□□ -0.6
KPNB1-202ENST00000535458 PCDHB15Q9Y5E8 787 aa11.32□□□□□ -0.6
KPNB1-202ENST00000535458 SEC24BO95487 1268 aa11.32□□□□□ -0.6
KPNB1-202ENST00000535458 MYH16Q9H6N6 1097 aa11.32□□□□□ -0.6
KPNB1-202ENST00000535458 AAMPQ13685 434 aa11.32□□□□□ -0.6
KPNB1-202ENST00000535458 NSD2O96028 1365 aa11.32□□□□□ -0.6
KPNB1-202ENST00000535458 SIGLEC1Q9BZZ2 1709 aa11.31□□□□□ -0.6
KPNB1-202ENST00000535458 RAPGEF3O95398 923 aa11.31□□□□□ -0.6
KPNB1-202ENST00000535458 GZF1Q9H116 711 aaPredicted RBP11.31□□□□□ -0.6
KPNB1-202ENST00000535458 SENP3Q9H4L4 574 aaPredicted RBP11.31□□□□□ -0.6
KPNB1-202ENST00000535458 VIRMAQ69YN4 1812 aaKnown RBP11.31□□□□□ -0.6
KPNB1-202ENST00000535458 CAMSAP1Q5T5Y3 1602 aa11.31□□□□□ -0.6
KPNB1-202ENST00000535458 ARHGEF28Q8N1W1 1705 aaKnown RBP11.31□□□□□ -0.6
KPNB1-202ENST00000535458 NEXMIFQ5QGS0 1516 aa11.3□□□□□ -0.6
KPNB1-202ENST00000535458 STK26Q9P289 416 aa11.3□□□□□ -0.6
KPNB1-202ENST00000535458 IDI1Q13907 227 aa11.3□□□□□ -0.6
KPNB1-202ENST00000535458 NCBP3Q53F19 620 aaKnown RBP11.3□□□□□ -0.6
KPNB1-202ENST00000535458 POGKQ9P215 609 aa11.3□□□□□ -0.6
KPNB1-202ENST00000535458 PDZRN3Q9UPQ7 1066 aa11.29□□□□□ -0.6
KPNB1-202ENST00000535458 PIK3C2BO00750 1634 aa11.29□□□□□ -0.6
KPNB1-202ENST00000535458 SRPK2P78362 688 aaKnown RBP11.28□□□□□ -0.6
KPNB1-202ENST00000535458 GGNBP2Q9H3C7 697 aa11.28□□□□□ -0.6
KPNB1-202ENST00000535458 U2SURPO15042 1029 aaKnown RBP11.28□□□□□ -0.6
KPNB1-202ENST00000535458 RWDD1Q9H446 243 aaPredicted RBP11.28□□□□□ -0.6
KPNB1-202ENST00000535458 A0A1W2PP64 1363 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms