RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, humanhuman

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-238ENST00000534647 LAMC1P11047 1609 aa17.38■□□□□ 0.37
CTNND1-238ENST00000534647 SOS2Q07890 1332 aaPredicted RBP17.38■□□□□ 0.37
CTNND1-238ENST00000534647 NALCNQ8IZF0 1738 aa17.38■□□□□ 0.37
CTNND1-238ENST00000534647 RBM6P78332 1123 aaKnown RBP17.36■□□□□ 0.37
CTNND1-238ENST00000534647 QTRT2Q9H974 415 aaKnown RBP17.36■□□□□ 0.37
CTNND1-238ENST00000534647 ORAI2Q96SN7 254 aa17.35■□□□□ 0.37
CTNND1-238ENST00000534647 C8orf37Q96NL8 207 aa17.34■□□□□ 0.37
CTNND1-238ENST00000534647 NGLY1Q96IV0 654 aa17.32■□□□□ 0.36
CTNND1-238ENST00000534647 FNBP4Q8N3X1 1017 aaPredicted RBP17.3■□□□□ 0.36
CTNND1-238ENST00000534647 PPLO60437 1756 aa17.29■□□□□ 0.36
CTNND1-238ENST00000534647 ANKRD30BQ9BXX2 1392 aa17.28■□□□□ 0.36
CTNND1-238ENST00000534647 ADGRF5Q8IZF2 1346 aa17.28■□□□□ 0.36
CTNND1-238ENST00000534647 ADAMTS2O95450 1211 aa17.28■□□□□ 0.36
CTNND1-238ENST00000534647 RGS12O14924 1447 aa17.28■□□□□ 0.36
CTNND1-238ENST00000534647 TECPR2O15040 1411 aa17.28■□□□□ 0.36
CTNND1-238ENST00000534647 NPHP3Q7Z494 1330 aa17.27■□□□□ 0.36
CTNND1-238ENST00000534647 CCDC144AA2RUR9 1427 aa17.27■□□□□ 0.35
CTNND1-238ENST00000534647 SPATA31E1Q6ZUB1 1445 aa17.27■□□□□ 0.35
CTNND1-238ENST00000534647 ABCC11Q96J66 1382 aa17.27■□□□□ 0.35
CTNND1-238ENST00000534647 ESCO1Q5FWF5 840 aa17.26■□□□□ 0.35
CTNND1-238ENST00000534647 USP21Q9UK80 565 aa17.26■□□□□ 0.35
CTNND1-238ENST00000534647 TRPC5Q9UL62 973 aaPredicted RBP17.26■□□□□ 0.35
CTNND1-238ENST00000534647 CDC42BPGQ6DT37 1551 aa17.26■□□□□ 0.35
CTNND1-238ENST00000534647 LRPPRCP42704 1394 aaKnown RBP17.26■□□□□ 0.35
CTNND1-238ENST00000534647 ACIN1Q9UKV3 1341 aaKnown RBP17.25■□□□□ 0.35
CTNND1-238ENST00000534647 SIRT1Q96EB6 747 aa17.25■□□□□ 0.35
CTNND1-238ENST00000534647 MPHOSPH9Q99550 1183 aa17.25■□□□□ 0.35
CTNND1-238ENST00000534647 COL22A1Q8NFW1 1626 aaPredicted RBP17.25■□□□□ 0.35
CTNND1-238ENST00000534647 RGL3Q3MIN7 710 aa17.23■□□□□ 0.35
CTNND1-238ENST00000534647 MYOM2P54296 1465 aa17.23■□□□□ 0.35
CTNND1-238ENST00000534647 PXDNQ92626 1479 aa17.23■□□□□ 0.35
CTNND1-238ENST00000534647 FOXO3O43524 673 aa17.22■□□□□ 0.35
CTNND1-238ENST00000534647 WAPLQ7Z5K2 1190 aa17.22■□□□□ 0.35
CTNND1-238ENST00000534647 ATRNO75882 1429 aa17.21■□□□□ 0.35
CTNND1-238ENST00000534647 PIK3C2GO75747 1445 aa17.21■□□□□ 0.34
CTNND1-238ENST00000534647 ATAD2Q6PL18 1390 aa17.2■□□□□ 0.34
CTNND1-238ENST00000534647 STK26Q9P289 416 aa17.2■□□□□ 0.34
CTNND1-238ENST00000534647 TMEM132EQ6IEE7 984 aa17.19■□□□□ 0.34
CTNND1-238ENST00000534647 BCL9LQ86UU0 1499 aa17.18■□□□□ 0.34
CTNND1-238ENST00000534647 C14orf93Q9H972 538 aaKnown RBP17.18■□□□□ 0.34
CTNND1-238ENST00000534647 YTHDC2Q9H6S0 1430 aaKnown RBP17.17■□□□□ 0.34
CTNND1-238ENST00000534647 PLEKHH1Q9ULM0 1364 aa17.16■□□□□ 0.34
CTNND1-238ENST00000534647 IFT172Q9UG01 1749 aa17.16■□□□□ 0.34
CTNND1-238ENST00000534647 CCDC125Q86Z20 511 aa17.16■□□□□ 0.34
CTNND1-238ENST00000534647 SPATA31A3Q5VYP0 1347 aa17.16■□□□□ 0.34
CTNND1-238ENST00000534647 XPCQ01831 940 aaPredicted RBP17.15■□□□□ 0.34
CTNND1-238ENST00000534647 KNDC1Q76NI1 1749 aa17.15■□□□□ 0.34
CTNND1-238ENST00000534647 NRXN1Q9ULB1 1477 aa17.14■□□□□ 0.33
CTNND1-238ENST00000534647 GJD4Q96KN9 370 aaPredicted RBP17.14■□□□□ 0.33
CTNND1-238ENST00000534647 NUTM2FA1L443 756 aa17.13■□□□□ 0.33
CTNND1-238ENST00000534647 KRT28Q7Z3Y7 464 aa17.12■□□□□ 0.33
CTNND1-238ENST00000534647 DHX57Q6P158 1386 aaKnown RBP17.12■□□□□ 0.33
CTNND1-238ENST00000534647 FMN2Q9NZ56 1722 aa17.11■□□□□ 0.33
CTNND1-238ENST00000534647 UNC5CLQ8IV45 518 aa17.11■□□□□ 0.33
CTNND1-238ENST00000534647 SLIT2O94813 1529 aa17.11■□□□□ 0.33
CTNND1-238ENST00000534647 PLCB2Q00722 1185 aa17.1■□□□□ 0.33
CTNND1-238ENST00000534647 PSME1Q06323 249 aa17.1■□□□□ 0.33
CTNND1-238ENST00000534647 CFAP70Q5T0N1 1121 aa17.1■□□□□ 0.33
CTNND1-238ENST00000534647 PHF8Q9UPP1 1060 aa17.1■□□□□ 0.33
CTNND1-238ENST00000534647 KIF1AQ12756 1690 aa17.1■□□□□ 0.33
CTNND1-238ENST00000534647 MARF1Q9Y4F3 1742 aaKnown RBP17.1■□□□□ 0.33
CTNND1-238ENST00000534647 SBNO1A3KN83 1393 aa17.08■□□□□ 0.32
CTNND1-238ENST00000534647 ATXN8OSP0DMR3 200 aa17.07■□□□□ 0.32
CTNND1-238ENST00000534647 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.07■□□□□ 0.32
CTNND1-238ENST00000534647 ONECUT3O60422 494 aaPredicted RBP17.06■□□□□ 0.32
CTNND1-238ENST00000534647 PRAM1Q96QH2 718 aa17.06■□□□□ 0.32
CTNND1-238ENST00000534647 TNS3Q68CZ2 1445 aa17.05■□□□□ 0.32
CTNND1-238ENST00000534647 ZRANB1Q9UGI0 708 aa17.05■□□□□ 0.32
CTNND1-238ENST00000534647 DLC1Q96QB1 1528 aa17.05■□□□□ 0.32
CTNND1-238ENST00000534647 RALGAPBQ86X10 1494 aa17.05■□□□□ 0.32
CTNND1-238ENST00000534647 ANKARQ7Z5J8 1434 aa17.04■□□□□ 0.32
CTNND1-238ENST00000534647 VPS72Q15906 364 aa17.04■□□□□ 0.32
CTNND1-238ENST00000534647 STAC3Q96MF2 364 aa17.04■□□□□ 0.32
CTNND1-238ENST00000534647 ARHGEF10O15013 1369 aa17.03■□□□□ 0.32
CTNND1-238ENST00000534647 USP32Q8NFA0 1604 aa17.03■□□□□ 0.32
CTNND1-238ENST00000534647 GLI3P10071 1580 aa17.02■□□□□ 0.32
CTNND1-238ENST00000534647 POGKQ9P215 609 aa17.02■□□□□ 0.32
CTNND1-238ENST00000534647 CABLES1Q8TDN4 633 aa17.01■□□□□ 0.31
CTNND1-238ENST00000534647 ADGRB1O14514 1584 aa17■□□□□ 0.31
CTNND1-238ENST00000534647 BLMP54132 1417 aaPredicted RBP17■□□□□ 0.31
CTNND1-238ENST00000534647 HAP1P54257 671 aaPredicted RBP17■□□□□ 0.31
CTNND1-238ENST00000534647 RAB3GAP2Q9H2M9 1393 aa17■□□□□ 0.31
CTNND1-238ENST00000534647 ADGRB2O60241 1585 aa16.99■□□□□ 0.31
CTNND1-238ENST00000534647 SAFB2Q14151 953 aaKnown RBP eCLIP16.99■□□□□ 0.31
CTNND1-238ENST00000534647 SEPT12Q8IYM1 358 aa16.99■□□□□ 0.31
CTNND1-238ENST00000534647 RGPD8O14715 1765 aaPredicted RBP16.98■□□□□ 0.31
CTNND1-238ENST00000534647 FAM83GA6ND36 823 aa16.98■□□□□ 0.31
CTNND1-238ENST00000534647 PRKCSHP14314 528 aaPredicted RBP16.98■□□□□ 0.31
CTNND1-238ENST00000534647 HRCP23327 699 aa16.98■□□□□ 0.31
CTNND1-238ENST00000534647 EIF3AQ14152 1382 aaKnown RBP16.98■□□□□ 0.31
CTNND1-238ENST00000534647 EP400Q96L91 3159 aa16.97■□□□□ 0.31
CTNND1-238ENST00000534647 PMFBP1Q8TBY8 1022 aa16.97■□□□□ 0.31
CTNND1-238ENST00000534647 NWD2Q9ULI1 1742 aa16.96■□□□□ 0.31
CTNND1-238ENST00000534647 LMOD2Q6P5Q4 547 aa16.96■□□□□ 0.31
CTNND1-238ENST00000534647 RNF216Q9NWF9 866 aaPredicted RBP16.96■□□□□ 0.31
CTNND1-238ENST00000534647 TRAK1Q9UPV9 953 aa16.96■□□□□ 0.31
CTNND1-238ENST00000534647 GPRASP1Q5JY77 1395 aa16.95■□□□□ 0.3
CTNND1-238ENST00000534647 WASLO00401 505 aaPredicted RBP16.95■□□□□ 0.3
CTNND1-238ENST00000534647 KRT27Q7Z3Y8 459 aa16.94■□□□□ 0.3
CTNND1-238ENST00000534647 DCAF11Q8TEB1 546 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms