RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 NUTM2FA1L443 756 aa13.11□□□□□ -0.31
COPB1-211ENST00000534234 HRCP23327 699 aa13.11□□□□□ -0.31
COPB1-211ENST00000534234 NALCNQ8IZF0 1738 aa13.1□□□□□ -0.31
COPB1-211ENST00000534234 PNPLA6Q8IY17 1366 aa13.1□□□□□ -0.31
COPB1-211ENST00000534234 SIRT1Q96EB6 747 aa13.1□□□□□ -0.31
COPB1-211ENST00000534234 TECPR2O15040 1411 aa13.1□□□□□ -0.31
COPB1-211ENST00000534234 PLEKHH1Q9ULM0 1364 aa13.09□□□□□ -0.31
COPB1-211ENST00000534234 FOXO3O43524 673 aa13.09□□□□□ -0.31
COPB1-211ENST00000534234 C8orf37Q96NL8 207 aa13.09□□□□□ -0.31
COPB1-211ENST00000534234 YTHDC2Q9H6S0 1430 aaKnown RBP13.09□□□□□ -0.31
COPB1-211ENST00000534234 AFF2P51816 1311 aa13.09□□□□□ -0.31
COPB1-211ENST00000534234 DHX57Q6P158 1386 aaKnown RBP13.08□□□□□ -0.31
COPB1-211ENST00000534234 SHPRHQ149N8 1683 aa13.08□□□□□ -0.32
COPB1-211ENST00000534234 RXRBP28702 533 aa13.08□□□□□ -0.32
COPB1-211ENST00000534234 NPHP3Q7Z494 1330 aa13.08□□□□□ -0.32
COPB1-211ENST00000534234 ADAMTS2O95450 1211 aa13.07□□□□□ -0.32
COPB1-211ENST00000534234 KDM2AQ9Y2K7 1162 aa13.07□□□□□ -0.32
COPB1-211ENST00000534234 NHSL1Q5SYE7 1610 aa13.07□□□□□ -0.32
COPB1-211ENST00000534234 NGLY1Q96IV0 654 aa13.07□□□□□ -0.32
COPB1-211ENST00000534234 XPCQ01831 940 aaPredicted RBP13.06□□□□□ -0.32
COPB1-211ENST00000534234 DCAF11Q8TEB1 546 aa13.06□□□□□ -0.32
COPB1-211ENST00000534234 QTRT2Q9H974 415 aaKnown RBP13.06□□□□□ -0.32
COPB1-211ENST00000534234 NRXN1Q9ULB1 1477 aa13.05□□□□□ -0.32
COPB1-211ENST00000534234 SAFB2Q14151 953 aaKnown RBP eCLIP13.05□□□□□ -0.32
COPB1-211ENST00000534234 PRAM1Q96QH2 718 aa13.05□□□□□ -0.32
COPB1-211ENST00000534234 MYOM2P54296 1465 aa13.04□□□□□ -0.32
COPB1-211ENST00000534234 STAC3Q96MF2 364 aa13.04□□□□□ -0.32
COPB1-211ENST00000534234 POGKQ9P215 609 aa13.04□□□□□ -0.32
COPB1-211ENST00000534234 CDC42BPGQ6DT37 1551 aa13.03□□□□□ -0.32
COPB1-211ENST00000534234 IFT172Q9UG01 1749 aa13.03□□□□□ -0.32
COPB1-211ENST00000534234 TRAK1Q9UPV9 953 aa13.03□□□□□ -0.32
COPB1-211ENST00000534234 RBM6P78332 1123 aaKnown RBP13.02□□□□□ -0.33
COPB1-211ENST00000534234 KRT28Q7Z3Y7 464 aa13.01□□□□□ -0.33
COPB1-211ENST00000534234 USP21Q9UK80 565 aa13.01□□□□□ -0.33
COPB1-211ENST00000534234 PHF8Q9UPP1 1060 aa13.01□□□□□ -0.33
COPB1-211ENST00000534234 LAMC1P11047 1609 aa13.01□□□□□ -0.33
COPB1-211ENST00000534234 FNBP4Q8N3X1 1017 aaPredicted RBP13□□□□□ -0.33
COPB1-211ENST00000534234 PXDNQ92626 1479 aa12.99□□□□□ -0.33
COPB1-211ENST00000534234 UPF1Q92900 1129 aaKnown RBP eCLIP12.99□□□□□ -0.33
COPB1-211ENST00000534234 SPATA31A3Q5VYP0 1347 aa12.99□□□□□ -0.33
COPB1-211ENST00000534234 PSME1Q06323 249 aa12.98□□□□□ -0.33
COPB1-211ENST00000534234 HIRIP3Q9BW71 556 aaPredicted RBP12.98□□□□□ -0.33
COPB1-211ENST00000534234 ADRA2BP18089 450 aa12.98□□□□□ -0.33
COPB1-211ENST00000534234 TRPC5Q9UL62 973 aaPredicted RBP12.98□□□□□ -0.33
COPB1-211ENST00000534234 PMFBP1Q8TBY8 1022 aa12.97□□□□□ -0.33
COPB1-211ENST00000534234 CDK12Q9NYV4 1490 aaPredicted RBP12.97□□□□□ -0.33
COPB1-211ENST00000534234 MINK1Q8N4C8 1332 aaPredicted RBP12.96□□□□□ -0.33
COPB1-211ENST00000534234 KNDC1Q76NI1 1749 aa12.96□□□□□ -0.33
COPB1-211ENST00000534234 LMOD2Q6P5Q4 547 aa12.95□□□□□ -0.34
COPB1-211ENST00000534234 ADGRB1O14514 1584 aa12.95□□□□□ -0.34
COPB1-211ENST00000534234 DLC1Q96QB1 1528 aa12.95□□□□□ -0.34
COPB1-211ENST00000534234 WASLO00401 505 aaPredicted RBP12.94□□□□□ -0.34
COPB1-211ENST00000534234 PLEKHG5O94827 1062 aa12.94□□□□□ -0.34
COPB1-211ENST00000534234 HAP1P54257 671 aaPredicted RBP12.94□□□□□ -0.34
COPB1-211ENST00000534234 CABLES1Q8TDN4 633 aa12.94□□□□□ -0.34
COPB1-211ENST00000534234 FMN2Q9NZ56 1722 aa12.93□□□□□ -0.34
COPB1-211ENST00000534234 BCL9LQ86UU0 1499 aa12.92□□□□□ -0.34
COPB1-211ENST00000534234 RGS12O14924 1447 aa12.92□□□□□ -0.34
COPB1-211ENST00000534234 ANKARQ7Z5J8 1434 aa12.92□□□□□ -0.34
COPB1-211ENST00000534234 COL22A1Q8NFW1 1626 aaPredicted RBP12.92□□□□□ -0.34
COPB1-211ENST00000534234 SBNO1A3KN83 1393 aa12.92□□□□□ -0.34
COPB1-211ENST00000534234 PRR36Q9H6K5 1346 aa12.92□□□□□ -0.34
COPB1-211ENST00000534234 GJD4Q96KN9 370 aaPredicted RBP12.91□□□□□ -0.34
COPB1-211ENST00000534234 ATRNO75882 1429 aa12.91□□□□□ -0.34
COPB1-211ENST00000534234 TNS3Q68CZ2 1445 aa12.91□□□□□ -0.34
COPB1-211ENST00000534234 NBPF1Q3BBV0 1214 aa12.9□□□□□ -0.34
COPB1-211ENST00000534234 UNC5CLQ8IV45 518 aa12.9□□□□□ -0.34
COPB1-211ENST00000534234 NGDNQ8NEJ9 315 aaKnown RBP12.9□□□□□ -0.34
COPB1-211ENST00000534234 EIF3AQ14152 1382 aaKnown RBP12.9□□□□□ -0.34
COPB1-211ENST00000534234 GPRASP1Q5JY77 1395 aa12.9□□□□□ -0.34
COPB1-211ENST00000534234 KIF1AQ12756 1690 aa12.89□□□□□ -0.35
COPB1-211ENST00000534234 ARHGEF10O15013 1369 aa12.89□□□□□ -0.35
COPB1-211ENST00000534234 NUDT16Q96DE0 195 aaKnown RBP12.89□□□□□ -0.35
COPB1-211ENST00000534234 PIAS4Q8N2W9 510 aaPredicted RBP12.88□□□□□ -0.35
COPB1-211ENST00000534234 CDK19Q9BWU1 502 aa12.88□□□□□ -0.35
COPB1-211ENST00000534234 ADGRB2O60241 1585 aa12.86□□□□□ -0.35
COPB1-211ENST00000534234 FAM83GA6ND36 823 aa12.86□□□□□ -0.35
COPB1-211ENST00000534234 PAK3O75914 559 aaPredicted RBP12.86□□□□□ -0.35
COPB1-211ENST00000534234 L3MBTL2Q969R5 705 aa12.86□□□□□ -0.35
COPB1-211ENST00000534234 SIN3AQ96ST3 1273 aa12.86□□□□□ -0.35
COPB1-211ENST00000534234 SLIT2O94813 1529 aa12.86□□□□□ -0.35
COPB1-211ENST00000534234 ATAD2Q6PL18 1390 aa12.86□□□□□ -0.35
COPB1-211ENST00000534234 TULP4Q9NRJ4 1543 aa12.85□□□□□ -0.35
COPB1-211ENST00000534234 NEUROD1Q13562 356 aa12.85□□□□□ -0.35
COPB1-211ENST00000534234 CCDC9Q9Y3X0 531 aaKnown RBP12.85□□□□□ -0.35
COPB1-211ENST00000534234 CCDC61Q9Y6R9 512 aa12.85□□□□□ -0.35
COPB1-211ENST00000534234 USP32Q8NFA0 1604 aa12.84□□□□□ -0.35
COPB1-211ENST00000534234 VPS72Q15906 364 aa12.84□□□□□ -0.35
COPB1-211ENST00000534234 RGPD8O14715 1765 aaPredicted RBP12.83□□□□□ -0.36
COPB1-211ENST00000534234 NBPF8Q3BBV2 869 aa12.82□□□□□ -0.36
COPB1-211ENST00000534234 BTG4Q9NY30 223 aa12.82□□□□□ -0.36
COPB1-211ENST00000534234 RALGAPBQ86X10 1494 aa12.82□□□□□ -0.36
COPB1-211ENST00000534234 PLEKHG3A1L390 1219 aa12.81□□□□□ -0.36
COPB1-211ENST00000534234 SRPK2P78362 688 aaKnown RBP12.81□□□□□ -0.36
COPB1-211ENST00000534234 SEPT12Q8IYM1 358 aa12.81□□□□□ -0.36
COPB1-211ENST00000534234 ACEP12821 1306 aa12.81□□□□□ -0.36
COPB1-211ENST00000534234 CENPJQ9HC77 1338 aaPredicted RBP12.81□□□□□ -0.36
COPB1-211ENST00000534234 ATP7BP35670 1465 aa12.81□□□□□ -0.36
COPB1-211ENST00000534234 ONECUT3O60422 494 aaPredicted RBP12.81□□□□□ -0.36
COPB1-211ENST00000534234 CCDC125Q86Z20 511 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms