RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 CEP170BQ9Y4F5 1589 aaPredicted RBP15.66■□□□□ 0.1
CCDC90B-218ENST00000533761 CLTCL1P53675 1640 aa15.64■□□□□ 0.09
CCDC90B-218ENST00000533761 KDM5AP29375 1690 aaKnown RBP15.63■□□□□ 0.09
CCDC90B-218ENST00000533761 ZNF142P52746 1687 aaPredicted RBP15.63■□□□□ 0.09
CCDC90B-218ENST00000533761 KIF1BO60333 1816 aa15.63■□□□□ 0.09
CCDC90B-218ENST00000533761 LMTK3Q96Q04 1460 aa15.63■□□□□ 0.09
CCDC90B-218ENST00000533761 ADGRB3O60242 1522 aa15.61■□□□□ 0.09
CCDC90B-218ENST00000533761 TMEM131LA2VDJ0 1609 aa15.61■□□□□ 0.09
CCDC90B-218ENST00000533761 UBR1Q8IWV7 1749 aa15.61■□□□□ 0.09
CCDC90B-218ENST00000533761 HDGFP51858 240 aaKnown RBP15.61■□□□□ 0.09
CCDC90B-218ENST00000533761 ZNF326Q5BKZ1 582 aaKnown RBP15.61■□□□□ 0.09
CCDC90B-218ENST00000533761 MARVELD3Q96A59 401 aa15.61■□□□□ 0.09
CCDC90B-218ENST00000533761 MIER1Q8N108 512 aa15.6■□□□□ 0.09
CCDC90B-218ENST00000533761 IRX5P78411 483 aaPredicted RBP15.59■□□□□ 0.09
CCDC90B-218ENST00000533761 RGL3Q3MIN7 710 aa15.59■□□□□ 0.09
CCDC90B-218ENST00000533761 TMEM106CQ9BVX2 250 aa15.59■□□□□ 0.09
CCDC90B-218ENST00000533761 SPATA31E1Q6ZUB1 1445 aa15.59■□□□□ 0.09
CCDC90B-218ENST00000533761 TMEM2Q9UHN6 1383 aa15.58■□□□□ 0.09
CCDC90B-218ENST00000533761 EID1Q9Y6B2 187 aa15.58■□□□□ 0.09
CCDC90B-218ENST00000533761 RPGRIP1LQ68CZ1 1315 aa15.58■□□□□ 0.08
CCDC90B-218ENST00000533761 NEURL4Q96JN8 1562 aa15.58■□□□□ 0.08
CCDC90B-218ENST00000533761 HSPA2P54652 639 aa15.58■□□□□ 0.08
CCDC90B-218ENST00000533761 PPP1R15AO75807 674 aaPredicted RBP15.57■□□□□ 0.08
CCDC90B-218ENST00000533761 ANKLE2Q86XL3 938 aa15.57■□□□□ 0.08
CCDC90B-218ENST00000533761 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.57■□□□□ 0.08
CCDC90B-218ENST00000533761 IFNL1Q8IU54 200 aa15.56■□□□□ 0.08
CCDC90B-218ENST00000533761 MYO5BQ9ULV0 1848 aa15.56■□□□□ 0.08
CCDC90B-218ENST00000533761 SLIT1O75093 1534 aa15.55■□□□□ 0.08
CCDC90B-218ENST00000533761 TXNDC2Q86VQ3 553 aa15.55■□□□□ 0.08
CCDC90B-218ENST00000533761 VGFO15240 615 aaPredicted RBP15.54■□□□□ 0.08
CCDC90B-218ENST00000533761 STAC3Q96MF2 364 aa15.54■□□□□ 0.08
CCDC90B-218ENST00000533761 ARHGAP23Q9P227 1491 aa15.54■□□□□ 0.08
CCDC90B-218ENST00000533761 RIMS2Q9UQ26 1411 aa15.54■□□□□ 0.08
CCDC90B-218ENST00000533761 L3MBTL2Q969R5 705 aa15.53■□□□□ 0.08
CCDC90B-218ENST00000533761 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.53■□□□□ 0.08
CCDC90B-218ENST00000533761 ZFYVE9O95405 1425 aa15.52■□□□□ 0.08
CCDC90B-218ENST00000533761 LTKP29376 864 aa15.52■□□□□ 0.07
CCDC90B-218ENST00000533761 DCAF11Q8TEB1 546 aa15.52■□□□□ 0.07
CCDC90B-218ENST00000533761 SCAF11Q99590 1463 aaKnown RBP15.51■□□□□ 0.07
CCDC90B-218ENST00000533761 NUTM2DQ5VT03 806 aaPredicted RBP15.5■□□□□ 0.07
CCDC90B-218ENST00000533761 OCEL1Q9H607 264 aa15.5■□□□□ 0.07
CCDC90B-218ENST00000533761 NEXMIFQ5QGS0 1516 aa15.5■□□□□ 0.07
CCDC90B-218ENST00000533761 NCKAP5LQ9HCH0 1330 aa15.49■□□□□ 0.07
CCDC90B-218ENST00000533761 BCANQ96GW7 911 aa15.49■□□□□ 0.07
CCDC90B-218ENST00000533761 KDM2AQ9Y2K7 1162 aa15.49■□□□□ 0.07
CCDC90B-218ENST00000533761 PPLO60437 1756 aa15.48■□□□□ 0.07
CCDC90B-218ENST00000533761 POLR1AO95602 1720 aaPredicted RBP15.47■□□□□ 0.07
CCDC90B-218ENST00000533761 MED14O60244 1454 aa15.46■□□□□ 0.07
CCDC90B-218ENST00000533761 PLEKHG1Q9ULL1 1385 aa15.46■□□□□ 0.07
CCDC90B-218ENST00000533761 IFT172Q9UG01 1749 aa15.46■□□□□ 0.06
CCDC90B-218ENST00000533761 ZNF316A6NFI3 1004 aaPredicted RBP15.45■□□□□ 0.06
CCDC90B-218ENST00000533761 MYOM2P54296 1465 aa15.45■□□□□ 0.06
CCDC90B-218ENST00000533761 NPHP4O75161 1426 aaPredicted RBP15.45■□□□□ 0.06
CCDC90B-218ENST00000533761 ADGRF5Q8IZF2 1346 aa15.45■□□□□ 0.06
CCDC90B-218ENST00000533761 EMP3P54852 163 aa15.45■□□□□ 0.06
CCDC90B-218ENST00000533761 STRCQ7RTU9 1775 aa15.44■□□□□ 0.06
CCDC90B-218ENST00000533761 KRTAP3-3Q9BYR6 98 aa15.42■□□□□ 0.06
CCDC90B-218ENST00000533761 KRTAP3-2Q9BYR7 98 aa15.42■□□□□ 0.06
CCDC90B-218ENST00000533761 IQGAP1P46940 1657 aa15.41■□□□□ 0.06
CCDC90B-218ENST00000533761 NRXN1Q9ULB1 1477 aa15.41■□□□□ 0.06
CCDC90B-218ENST00000533761 PIK3C2GO75747 1445 aa15.41■□□□□ 0.06
CCDC90B-218ENST00000533761 SLC26A8Q96RN1 970 aa15.41■□□□□ 0.06
CCDC90B-218ENST00000533761 TBX22Q9Y458 520 aa15.41■□□□□ 0.06
CCDC90B-218ENST00000533761 SETBP1Q9Y6X0 1596 aa15.4■□□□□ 0.06
CCDC90B-218ENST00000533761 NUBP1P53384 320 aa15.39■□□□□ 0.05
CCDC90B-218ENST00000533761 C14orf93Q9H972 538 aaKnown RBP15.39■□□□□ 0.05
CCDC90B-218ENST00000533761 RALGAPBQ86X10 1494 aa15.39■□□□□ 0.05
CCDC90B-218ENST00000533761 ADAMTS13Q76LX8 1427 aa15.38■□□□□ 0.05
CCDC90B-218ENST00000533761 PRAG1Q86YV5 1406 aa15.38■□□□□ 0.05
CCDC90B-218ENST00000533761 EIF4G2P78344 907 aaKnown RBP eCLIP15.37■□□□□ 0.05
CCDC90B-218ENST00000533761 CFAP70Q5T0N1 1121 aa15.36■□□□□ 0.05
CCDC90B-218ENST00000533761 HS3ST6Q96QI5 342 aa15.36■□□□□ 0.05
CCDC90B-218ENST00000533761 DIP2AQ14689 1571 aa15.36■□□□□ 0.05
CCDC90B-218ENST00000533761 ALKQ9UM73 1620 aa15.36■□□□□ 0.05
CCDC90B-218ENST00000533761 NRXN3Q9Y4C0 1643 aa15.36■□□□□ 0.05
CCDC90B-218ENST00000533761 PLCD3Q8N3E9 789 aa15.36■□□□□ 0.05
CCDC90B-218ENST00000533761 ZBTB47Q9UFB7 747 aaPredicted RBP15.35■□□□□ 0.05
CCDC90B-218ENST00000533761 LAMC1P11047 1609 aa15.35■□□□□ 0.05
CCDC90B-218ENST00000533761 ROCK2O75116 1388 aaKnown RBP15.34■□□□□ 0.05
CCDC90B-218ENST00000533761 PIK3R4Q99570 1358 aa15.34■□□□□ 0.05
CCDC90B-218ENST00000533761 POTEB3A0JP26 581 aa15.34■□□□□ 0.05
CCDC90B-218ENST00000533761 NBPF8Q3BBV2 869 aa15.34■□□□□ 0.05
CCDC90B-218ENST00000533761 POTEBQ6S5H4 581 aa15.34■□□□□ 0.05
CCDC90B-218ENST00000533761 FAM212AQ96EL1 285 aa15.33■□□□□ 0.05
CCDC90B-218ENST00000533761 METP08581 1390 aa15.33■□□□□ 0.04
CCDC90B-218ENST00000533761 CARD11Q9BXL7 1154 aa15.32■□□□□ 0.04
CCDC90B-218ENST00000533761 KIAA1210Q9ULL0 1709 aa15.32■□□□□ 0.04
CCDC90B-218ENST00000533761 TMEM132EQ6IEE7 984 aa15.32■□□□□ 0.04
CCDC90B-218ENST00000533761 FAM205CA6NFA0 338 aa15.31■□□□□ 0.04
CCDC90B-218ENST00000533761 KCNA6P17658 529 aa15.31■□□□□ 0.04
CCDC90B-218ENST00000533761 TRPM1Q7Z4N2 1603 aa15.31■□□□□ 0.04
CCDC90B-218ENST00000533761 SETD1AO15047 1707 aaKnown RBP15.29■□□□□ 0.04
CCDC90B-218ENST00000533761 NBPF1Q3BBV0 1214 aa15.29■□□□□ 0.04
CCDC90B-218ENST00000533761 AMOTL2Q9Y2J4 779 aa15.29■□□□□ 0.04
CCDC90B-218ENST00000533761 GPRASP1Q5JY77 1395 aa15.29■□□□□ 0.04
CCDC90B-218ENST00000533761 USP47Q96K76 1375 aa15.28■□□□□ 0.04
CCDC90B-218ENST00000533761 ZNF335Q9H4Z2 1342 aaPredicted RBP15.28■□□□□ 0.04
CCDC90B-218ENST00000533761 STK26Q9P289 416 aa15.28■□□□□ 0.04
CCDC90B-218ENST00000533761 CHD2O14647 1828 aaKnown RBP15.27■□□□□ 0.04
CCDC90B-218ENST00000533761 ADGRB1O14514 1584 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms