RNA–Protein interactions for RNA: ENST00000533131.5

BDNF-217, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-217ENST00000533131 KRBA2Q6ZNG9 492 aa8.73□□□□□ -1.01
BDNF-217ENST00000533131 PAF1Q8N7H5 531 aa8.73□□□□□ -1.01
BDNF-217ENST00000533131 GSE1Q14687 1217 aa8.72□□□□□ -1.01
BDNF-217ENST00000533131 BIRC2Q13490 618 aa8.72□□□□□ -1.01
BDNF-217ENST00000533131 PROCA1Q8NCQ7 364 aaPredicted RBP8.72□□□□□ -1.01
BDNF-217ENST00000533131 USP5P45974 858 aa8.72□□□□□ -1.01
BDNF-217ENST00000533131 MPHOSPH6Q99547 160 aaKnown RBP8.72□□□□□ -1.01
BDNF-217ENST00000533131 ZSWIM4Q9H7M6 989 aa8.72□□□□□ -1.01
BDNF-217ENST00000533131 STK10O94804 968 aaKnown RBP8.71□□□□□ -1.02
BDNF-217ENST00000533131 PTPROQ16827 1216 aa8.71□□□□□ -1.02
BDNF-217ENST00000533131 RBM46Q8TBY0 533 aaKnown RBP8.71□□□□□ -1.02
BDNF-217ENST00000533131 CHPF2Q9P2E5 772 aa8.71□□□□□ -1.02
BDNF-217ENST00000533131 RINLQ6ZS11 566 aa8.71□□□□□ -1.02
BDNF-217ENST00000533131 WDR75Q8IWA0 830 aaKnown RBP8.71□□□□□ -1.02
BDNF-217ENST00000533131 ZC3H4Q9UPT8 1303 aaKnown RBP8.7□□□□□ -1.02
BDNF-217ENST00000533131 IGSF5Q9NSI5 407 aa8.7□□□□□ -1.02
BDNF-217ENST00000533131 TAGLNQ01995 201 aaKnown RBP8.7□□□□□ -1.02
BDNF-217ENST00000533131 POLA1P09884 1462 aaPredicted RBP8.69□□□□□ -1.02
BDNF-217ENST00000533131 LMOD1P29536 600 aaPredicted RBP8.69□□□□□ -1.02
BDNF-217ENST00000533131 CCDC189A1A4V9 331 aa8.69□□□□□ -1.02
BDNF-217ENST00000533131 MTA3Q9BTC8 594 aa8.69□□□□□ -1.02
BDNF-217ENST00000533131 LNPKQ9C0E8 428 aa8.69□□□□□ -1.02
BDNF-217ENST00000533131 DMRT2Q9Y5R5 561 aa8.69□□□□□ -1.02
BDNF-217ENST00000533131 MTUS2Q5JR59 1369 aa8.69□□□□□ -1.02
BDNF-217ENST00000533131 TCERG1O14776 1098 aaKnown RBP8.69□□□□□ -1.02
BDNF-217ENST00000533131 DNAJA1P31689 397 aaKnown RBP8.69□□□□□ -1.02
BDNF-217ENST00000533131 ZNF467Q7Z7K2 595 aaPredicted RBP8.69□□□□□ -1.02
BDNF-217ENST00000533131 PDILTQ8N807 584 aa8.69□□□□□ -1.02
BDNF-217ENST00000533131 KIF27Q86VH2 1401 aa8.68□□□□□ -1.02
BDNF-217ENST00000533131 HOXA2O43364 376 aa8.68□□□□□ -1.02
BDNF-217ENST00000533131 CHD1O14646 1710 aa8.68□□□□□ -1.02
BDNF-217ENST00000533131 PPFIA4O75335 1185 aa8.68□□□□□ -1.02
BDNF-217ENST00000533131 TRIM34Q9BYJ4 488 aa8.68□□□□□ -1.02
BDNF-217ENST00000533131 CLGNO14967 610 aa8.67□□□□□ -1.02
BDNF-217ENST00000533131 PHF14O94880 888 aa8.67□□□□□ -1.02
BDNF-217ENST00000533131 SYNJ1O43426 1573 aa8.67□□□□□ -1.02
BDNF-217ENST00000533131 ARID4AP29374 1257 aaPredicted RBP8.67□□□□□ -1.02
BDNF-217ENST00000533131 USTQ9Y2C2 406 aa8.67□□□□□ -1.02
BDNF-217ENST00000533131 NPHP1O15259 732 aa8.67□□□□□ -1.02
BDNF-217ENST00000533131 TCEAL9Q9UHQ7 104 aa8.67□□□□□ -1.02
BDNF-217ENST00000533131 RAD54L2Q9Y4B4 1467 aa8.67□□□□□ -1.02
BDNF-217ENST00000533131 PYGBP11216 843 aa8.66□□□□□ -1.02
BDNF-217ENST00000533131 HOXD11P31277 338 aaPredicted RBP8.66□□□□□ -1.02
BDNF-217ENST00000533131 BIVM-ERCC5R4GMW8 1640 aa8.66□□□□□ -1.02
BDNF-217ENST00000533131 MSH5O43196 834 aa8.66□□□□□ -1.02
BDNF-217ENST00000533131 GIGYF2Q6Y7W6 1299 aaKnown RBP8.66□□□□□ -1.02
BDNF-217ENST00000533131 CCAR1Q8IX12 1150 aaKnown RBP8.66□□□□□ -1.02
BDNF-217ENST00000533131 SETD5Q9C0A6 1442 aa8.66□□□□□ -1.02
BDNF-217ENST00000533131 CCDC194A0A1B0GVG4 234 aa8.66□□□□□ -1.02
BDNF-217ENST00000533131 DHX16O60231 1041 aaKnown RBP8.66□□□□□ -1.02
BDNF-217ENST00000533131 EIF4G2P78344 907 aaKnown RBP eCLIP8.66□□□□□ -1.02
BDNF-217ENST00000533131 BMS1Q14692 1282 aaKnown RBP8.66□□□□□ -1.02
BDNF-217ENST00000533131 HDGFL1Q5TGJ6 251 aa8.66□□□□□ -1.02
BDNF-217ENST00000533131 PRR12Q9ULL5 1215 aa8.66□□□□□ -1.02
BDNF-217ENST00000533131 U2SURPO15042 1029 aaKnown RBP8.65□□□□□ -1.02
BDNF-217ENST00000533131 S100BP04271 92 aaPredicted RBP8.65□□□□□ -1.02
BDNF-217ENST00000533131 ERCC3P19447 782 aa8.65□□□□□ -1.02
BDNF-217ENST00000533131 TXNDC2Q86VQ3 553 aa8.65□□□□□ -1.02
BDNF-217ENST00000533131 NME8Q8N427 588 aa8.65□□□□□ -1.02
BDNF-217ENST00000533131 ERICH6BQ5W0A0 696 aa8.65□□□□□ -1.02
BDNF-217ENST00000533131 GET4Q7L5D6 327 aaPredicted RBP8.65□□□□□ -1.02
BDNF-217ENST00000533131 ISY1Q9ULR0 285 aaKnown RBP8.65□□□□□ -1.02
BDNF-217ENST00000533131 MARSP56192 900 aaKnown RBP8.65□□□□□ -1.03
BDNF-217ENST00000533131 FAN1Q9Y2M0 1017 aa8.65□□□□□ -1.03
BDNF-217ENST00000533131 ABCA5Q8WWZ7 1642 aa8.64□□□□□ -1.03
BDNF-217ENST00000533131 U3KPZ7 1027 aaPredicted RBP8.64□□□□□ -1.03
BDNF-217ENST00000533131 HSPA5P11021 654 aaKnown RBP8.64□□□□□ -1.03
BDNF-217ENST00000533131 SAFB2Q14151 953 aaKnown RBP eCLIP8.64□□□□□ -1.03
BDNF-217ENST00000533131 CCDC144BQ3MJ40 725 aa8.64□□□□□ -1.03
BDNF-217ENST00000533131 PBRM1Q86U86 1689 aa8.64□□□□□ -1.03
BDNF-217ENST00000533131 ZNF500O60304 480 aaPredicted RBP8.63□□□□□ -1.03
BDNF-217ENST00000533131 CSPP1Q1MSJ5 1256 aa8.63□□□□□ -1.03
BDNF-217ENST00000533131 UBA5Q9GZZ9 404 aa8.63□□□□□ -1.03
BDNF-217ENST00000533131 KIF21BO75037 1637 aa8.63□□□□□ -1.03
BDNF-217ENST00000533131 IFT140Q96RY7 1462 aa8.63□□□□□ -1.03
BDNF-217ENST00000533131 MS4A1P11836 297 aa8.63□□□□□ -1.03
BDNF-217ENST00000533131 RPS6KC1Q96S38 1066 aa8.63□□□□□ -1.03
BDNF-217ENST00000533131 FGD5Q6ZNL6 1462 aa8.63□□□□□ -1.03
BDNF-217ENST00000533131 CARMIL1Q5VZK9 1371 aa8.63□□□□□ -1.03
BDNF-217ENST00000533131 DYTNA2CJ06 578 aa8.63□□□□□ -1.03
BDNF-217ENST00000533131 PPP4R4Q6NUP7 873 aa8.63□□□□□ -1.03
BDNF-217ENST00000533131 CASC1Q6TDU7 716 aa8.63□□□□□ -1.03
BDNF-217ENST00000533131 MAGEC2Q9UBF1 373 aaPredicted RBP8.63□□□□□ -1.03
BDNF-217ENST00000533131 ANP32AP39687 249 aaKnown RBP8.62□□□□□ -1.03
BDNF-217ENST00000533131 ZNF622Q969S3 477 aaKnown RBP eCLIP8.62□□□□□ -1.03
BDNF-217ENST00000533131 AQRO60306 1485 aaKnown RBP eCLIP8.62□□□□□ -1.03
BDNF-217ENST00000533131 TSHZ1Q6ZSZ6 1077 aa8.62□□□□□ -1.03
BDNF-217ENST00000533131 PRPF38AQ8NAV1 312 aaKnown RBP8.62□□□□□ -1.03
BDNF-217ENST00000533131 ANKRD33BA6NCL7 494 aa8.62□□□□□ -1.03
BDNF-217ENST00000533131 HELBQ8NG08 1087 aaPredicted RBP8.62□□□□□ -1.03
BDNF-217ENST00000533131 JDP2Q8WYK2 163 aa8.62□□□□□ -1.03
BDNF-217ENST00000533131 CAPN10Q9HC96 672 aa8.62□□□□□ -1.03
BDNF-217ENST00000533131 EPB41L2O43491 1005 aaKnown RBP8.61□□□□□ -1.03
BDNF-217ENST00000533131 TMC1Q8TDI8 760 aa8.61□□□□□ -1.03
BDNF-217ENST00000533131 PRKAG2Q9UGJ0 569 aa8.61□□□□□ -1.03
BDNF-217ENST00000533131 TBC1D2BQ9UPU7 963 aa8.61□□□□□ -1.03
BDNF-217ENST00000533131 GRXCR2A6NFK2 248 aa8.61□□□□□ -1.03
BDNF-217ENST00000533131 SMC5Q8IY18 1101 aa8.61□□□□□ -1.03
BDNF-217ENST00000533131 CXorf38Q8TB03 319 aa8.61□□□□□ -1.03
BDNF-217ENST00000533131 TOP2BQ02880 1626 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms