RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 ZRANB1Q9UGI0 708 aa19.02■□□□□ 0.64
CAPN1-223ENST00000533079 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.02■□□□□ 0.63
CAPN1-223ENST00000533079 ROBO2Q9HCK4 1378 aa19.01■□□□□ 0.63
CAPN1-223ENST00000533079 NPHP3Q7Z494 1330 aa18.99■□□□□ 0.63
CAPN1-223ENST00000533079 PXDNQ92626 1479 aa18.98■□□□□ 0.63
CAPN1-223ENST00000533079 VGFO15240 615 aaPredicted RBP18.98■□□□□ 0.63
CAPN1-223ENST00000533079 ORAI2Q96SN7 254 aa18.98■□□□□ 0.63
CAPN1-223ENST00000533079 BCL9LQ86UU0 1499 aa18.97■□□□□ 0.63
CAPN1-223ENST00000533079 PPLO60437 1756 aa18.96■□□□□ 0.63
CAPN1-223ENST00000533079 RPGRIP1LQ68CZ1 1315 aa18.95■□□□□ 0.62
CAPN1-223ENST00000533079 LRPPRCP42704 1394 aaKnown RBP18.94■□□□□ 0.62
CAPN1-223ENST00000533079 ITGAEP38570 1179 aa18.93■□□□□ 0.62
CAPN1-223ENST00000533079 KIF1AQ12756 1690 aa18.92■□□□□ 0.62
CAPN1-223ENST00000533079 BLMP54132 1417 aaPredicted RBP18.91■□□□□ 0.62
CAPN1-223ENST00000533079 GJD4Q96KN9 370 aaPredicted RBP18.9■□□□□ 0.62
CAPN1-223ENST00000533079 KNDC1Q76NI1 1749 aa18.9■□□□□ 0.62
CAPN1-223ENST00000533079 TECPR2O15040 1411 aa18.9■□□□□ 0.62
CAPN1-223ENST00000533079 SLIT2O94813 1529 aa18.9■□□□□ 0.62
CAPN1-223ENST00000533079 GLI3P10071 1580 aa18.89■□□□□ 0.62
CAPN1-223ENST00000533079 USP32Q8NFA0 1604 aa18.89■□□□□ 0.62
CAPN1-223ENST00000533079 NAIPQ13075 1403 aa18.89■□□□□ 0.61
CAPN1-223ENST00000533079 LRP5O75197 1615 aa18.89■□□□□ 0.61
CAPN1-223ENST00000533079 ESCO1Q5FWF5 840 aa18.88■□□□□ 0.61
CAPN1-223ENST00000533079 RALGAPBQ86X10 1494 aa18.87■□□□□ 0.61
CAPN1-223ENST00000533079 FMN2Q9NZ56 1722 aa18.86■□□□□ 0.61
CAPN1-223ENST00000533079 CCDC144AA2RUR9 1427 aa18.86■□□□□ 0.61
CAPN1-223ENST00000533079 NWD2Q9ULI1 1742 aa18.84■□□□□ 0.61
CAPN1-223ENST00000533079 UNC5CLQ8IV45 518 aa18.84■□□□□ 0.61
CAPN1-223ENST00000533079 RRBP1Q9P2E9 1410 aaKnown RBP18.83■□□□□ 0.61
CAPN1-223ENST00000533079 FOXO3O43524 673 aa18.83■□□□□ 0.6
CAPN1-223ENST00000533079 IFT172Q9UG01 1749 aa18.83■□□□□ 0.6
CAPN1-223ENST00000533079 PLCH1Q4KWH8 1693 aa18.82■□□□□ 0.6
CAPN1-223ENST00000533079 BRWD3Q6RI45 1802 aa18.81■□□□□ 0.6
CAPN1-223ENST00000533079 SPATA31A3Q5VYP0 1347 aa18.8■□□□□ 0.6
CAPN1-223ENST00000533079 ABCA3Q99758 1704 aa18.8■□□□□ 0.6
CAPN1-223ENST00000533079 SF3B2Q13435 895 aaKnown RBP18.79■□□□□ 0.6
CAPN1-223ENST00000533079 ABCC11Q96J66 1382 aa18.79■□□□□ 0.6
CAPN1-223ENST00000533079 TNS3Q68CZ2 1445 aa18.78■□□□□ 0.6
CAPN1-223ENST00000533079 XPCQ01831 940 aaPredicted RBP18.78■□□□□ 0.6
CAPN1-223ENST00000533079 ANKRD30BQ9BXX2 1392 aa18.78■□□□□ 0.6
CAPN1-223ENST00000533079 PIK3C2GO75747 1445 aa18.76■□□□□ 0.59
CAPN1-223ENST00000533079 SLC4A1APQ9BWU0 796 aaKnown RBP18.76■□□□□ 0.59
CAPN1-223ENST00000533079 VPS72Q15906 364 aa18.75■□□□□ 0.59
CAPN1-223ENST00000533079 SPATA31E1Q6ZUB1 1445 aa18.74■□□□□ 0.59
CAPN1-223ENST00000533079 ADGRF5Q8IZF2 1346 aa18.74■□□□□ 0.59
CAPN1-223ENST00000533079 ARHGEF10O15013 1369 aa18.73■□□□□ 0.59
CAPN1-223ENST00000533079 SEPT12Q8IYM1 358 aa18.73■□□□□ 0.59
CAPN1-223ENST00000533079 YTHDC2Q9H6S0 1430 aaKnown RBP18.73■□□□□ 0.59
CAPN1-223ENST00000533079 NRXN1Q9ULB1 1477 aa18.72■□□□□ 0.59
CAPN1-223ENST00000533079 SBNO1A3KN83 1393 aa18.72■□□□□ 0.59
CAPN1-223ENST00000533079 ONECUT3O60422 494 aaPredicted RBP18.72■□□□□ 0.59
CAPN1-223ENST00000533079 WAPLQ7Z5K2 1190 aa18.72■□□□□ 0.59
CAPN1-223ENST00000533079 NRAPQ86VF7 1730 aa18.71■□□□□ 0.59
CAPN1-223ENST00000533079 PLEKHH1Q9ULM0 1364 aa18.71■□□□□ 0.59
CAPN1-223ENST00000533079 NUTM2FA1L443 756 aa18.71■□□□□ 0.59
CAPN1-223ENST00000533079 HAP1P54257 671 aaPredicted RBP18.71■□□□□ 0.59
CAPN1-223ENST00000533079 PSME1Q06323 249 aa18.71■□□□□ 0.59
CAPN1-223ENST00000533079 KRT28Q7Z3Y7 464 aa18.71■□□□□ 0.59
CAPN1-223ENST00000533079 DEFB132Q7Z7B7 95 aa18.71■□□□□ 0.59
CAPN1-223ENST00000533079 RGPD1P0DJD0 1748 aa18.7■□□□□ 0.58
CAPN1-223ENST00000533079 SIRT1Q96EB6 747 aa18.7■□□□□ 0.58
CAPN1-223ENST00000533079 STK26Q9P289 416 aa18.7■□□□□ 0.58
CAPN1-223ENST00000533079 KRT27Q7Z3Y8 459 aa18.69■□□□□ 0.58
CAPN1-223ENST00000533079 BAG6P46379 1132 aa18.68■□□□□ 0.58
CAPN1-223ENST00000533079 ADGRB2O60241 1585 aa18.68■□□□□ 0.58
CAPN1-223ENST00000533079 PHF8Q9UPP1 1060 aa18.67■□□□□ 0.58
CAPN1-223ENST00000533079 RGPD8O14715 1765 aaPredicted RBP18.67■□□□□ 0.58
CAPN1-223ENST00000533079 ANKARQ7Z5J8 1434 aa18.66■□□□□ 0.58
CAPN1-223ENST00000533079 CCDC9Q9Y3X0 531 aaKnown RBP18.66■□□□□ 0.58
CAPN1-223ENST00000533079 COL14A1Q05707 1796 aaKnown RBP18.65■□□□□ 0.58
CAPN1-223ENST00000533079 DISP2A7MBM2 1401 aa18.65■□□□□ 0.58
CAPN1-223ENST00000533079 TRPM3Q9HCF6 1732 aaPredicted RBP18.64■□□□□ 0.57
CAPN1-223ENST00000533079 DLC1Q96QB1 1528 aa18.64■□□□□ 0.57
CAPN1-223ENST00000533079 TMEM132EQ6IEE7 984 aa18.63■□□□□ 0.57
CAPN1-223ENST00000533079 PPARGC1BQ86YN6 1023 aaKnown RBP18.63■□□□□ 0.57
CAPN1-223ENST00000533079 ALS2Q96Q42 1657 aa18.63■□□□□ 0.57
CAPN1-223ENST00000533079 RGL3Q3MIN7 710 aa18.62■□□□□ 0.57
CAPN1-223ENST00000533079 THSD7AQ9UPZ6 1657 aa18.62■□□□□ 0.57
CAPN1-223ENST00000533079 TNS1Q9HBL0 1735 aaKnown RBP18.61■□□□□ 0.57
CAPN1-223ENST00000533079 DHX57Q6P158 1386 aaKnown RBP18.61■□□□□ 0.57
CAPN1-223ENST00000533079 HRCP23327 699 aa18.61■□□□□ 0.57
CAPN1-223ENST00000533079 CABLES1Q8TDN4 633 aa18.61■□□□□ 0.57
CAPN1-223ENST00000533079 EIF3AQ14152 1382 aaKnown RBP18.6■□□□□ 0.57
CAPN1-223ENST00000533079 CRYBG1Q9Y4K1 1723 aa18.6■□□□□ 0.57
CAPN1-223ENST00000533079 A0A0G2JS52 829 aa18.59■□□□□ 0.57
CAPN1-223ENST00000533079 MYT1Q01538 1121 aa18.59■□□□□ 0.57
CAPN1-223ENST00000533079 C14orf93Q9H972 538 aaKnown RBP18.59■□□□□ 0.57
CAPN1-223ENST00000533079 PSDA5PKW4 1024 aaPredicted RBP18.57■□□□□ 0.56
CAPN1-223ENST00000533079 FAM83GA6ND36 823 aa18.57■□□□□ 0.56
CAPN1-223ENST00000533079 FAM98CQ17RN3 349 aaKnown RBP18.57■□□□□ 0.56
CAPN1-223ENST00000533079 LMOD2Q6P5Q4 547 aa18.57■□□□□ 0.56
CAPN1-223ENST00000533079 TULP4Q9NRJ4 1543 aa18.55■□□□□ 0.56
CAPN1-223ENST00000533079 BTG4Q9NY30 223 aa18.55■□□□□ 0.56
CAPN1-223ENST00000533079 GPRASP1Q5JY77 1395 aa18.55■□□□□ 0.56
CAPN1-223ENST00000533079 ACIN1Q9UKV3 1341 aaKnown RBP18.54■□□□□ 0.56
CAPN1-223ENST00000533079 PRAM1Q96QH2 718 aa18.54■□□□□ 0.56
CAPN1-223ENST00000533079 PARD3Q8TEW0 1356 aa18.54■□□□□ 0.56
CAPN1-223ENST00000533079 SPATA31A5Q5VU36 1347 aa18.53■□□□□ 0.56
CAPN1-223ENST00000533079 SPATA31A7Q8IWB4 1347 aa18.53■□□□□ 0.56
CAPN1-223ENST00000533079 MPHOSPH9Q99550 1183 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms