RNA–Protein interactions for RNA: ENST00000532630.1

NR1H3-234, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-234ENST00000532630 USP21Q9UK80 565 aa22.49■■□□□ 1.19
NR1H3-234ENST00000532630 CCDC144AA2RUR9 1427 aa22.48■■□□□ 1.19
NR1H3-234ENST00000532630 CDC42BPGQ6DT37 1551 aa22.48■■□□□ 1.19
NR1H3-234ENST00000532630 IFT172Q9UG01 1749 aa22.48■■□□□ 1.19
NR1H3-234ENST00000532630 MARF1Q9Y4F3 1742 aaKnown RBP22.48■■□□□ 1.19
NR1H3-234ENST00000532630 PRAG1Q86YV5 1406 aa22.48■■□□□ 1.19
NR1H3-234ENST00000532630 COL22A1Q8NFW1 1626 aaPredicted RBP22.46■■□□□ 1.19
NR1H3-234ENST00000532630 NUTM2FA1L443 756 aa22.46■■□□□ 1.19
NR1H3-234ENST00000532630 NPHP3Q7Z494 1330 aa22.46■■□□□ 1.19
NR1H3-234ENST00000532630 ADGRF5Q8IZF2 1346 aa22.46■■□□□ 1.19
NR1H3-234ENST00000532630 TRPC5Q9UL62 973 aaPredicted RBP22.45■■□□□ 1.18
NR1H3-234ENST00000532630 XPCQ01831 940 aaPredicted RBP22.44■■□□□ 1.18
NR1H3-234ENST00000532630 KNDC1Q76NI1 1749 aa22.43■■□□□ 1.18
NR1H3-234ENST00000532630 FOXO3O43524 673 aa22.42■■□□□ 1.18
NR1H3-234ENST00000532630 WAPLQ7Z5K2 1190 aa22.42■■□□□ 1.18
NR1H3-234ENST00000532630 ATAD2Q6PL18 1390 aa22.4■■□□□ 1.18
NR1H3-234ENST00000532630 ANKRD30BQ9BXX2 1392 aa22.4■■□□□ 1.18
NR1H3-234ENST00000532630 TMEM132EQ6IEE7 984 aa22.4■■□□□ 1.18
NR1H3-234ENST00000532630 MPHOSPH9Q99550 1183 aa22.4■■□□□ 1.18
NR1H3-234ENST00000532630 RGPD8O14715 1765 aaPredicted RBP22.4■■□□□ 1.18
NR1H3-234ENST00000532630 LRPPRCP42704 1394 aaKnown RBP22.39■■□□□ 1.18
NR1H3-234ENST00000532630 FMN2Q9NZ56 1722 aa22.39■■□□□ 1.17
NR1H3-234ENST00000532630 FNBP4Q8N3X1 1017 aaPredicted RBP22.38■■□□□ 1.17
NR1H3-234ENST00000532630 PXDNQ92626 1479 aa22.38■■□□□ 1.17
NR1H3-234ENST00000532630 MYOM2P54296 1465 aa22.37■■□□□ 1.17
NR1H3-234ENST00000532630 SPATA31E1Q6ZUB1 1445 aa22.37■■□□□ 1.17
NR1H3-234ENST00000532630 ATRNO75882 1429 aa22.36■■□□□ 1.17
NR1H3-234ENST00000532630 KIF1AQ12756 1690 aa22.36■■□□□ 1.17
NR1H3-234ENST00000532630 TECPR2O15040 1411 aa22.35■■□□□ 1.17
NR1H3-234ENST00000532630 PLEKHH1Q9ULM0 1364 aa22.35■■□□□ 1.17
NR1H3-234ENST00000532630 ABCC11Q96J66 1382 aa22.33■■□□□ 1.17
NR1H3-234ENST00000532630 PIK3C2GO75747 1445 aa22.32■■□□□ 1.16
NR1H3-234ENST00000532630 YTHDC2Q9H6S0 1430 aaKnown RBP22.32■■□□□ 1.16
NR1H3-234ENST00000532630 HAP1P54257 671 aaPredicted RBP22.32■■□□□ 1.16
NR1H3-234ENST00000532630 PLEKHG5O94827 1062 aa22.31■■□□□ 1.16
NR1H3-234ENST00000532630 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.3■■□□□ 1.16
NR1H3-234ENST00000532630 BCL9LQ86UU0 1499 aa22.29■■□□□ 1.16
NR1H3-234ENST00000532630 KRT28Q7Z3Y7 464 aa22.28■■□□□ 1.16
NR1H3-234ENST00000532630 GJD4Q96KN9 370 aaPredicted RBP22.28■■□□□ 1.16
NR1H3-234ENST00000532630 SAFB2Q14151 953 aaKnown RBP eCLIP22.27■■□□□ 1.16
NR1H3-234ENST00000532630 SPATA31A3Q5VYP0 1347 aa22.27■■□□□ 1.16
NR1H3-234ENST00000532630 DHX57Q6P158 1386 aaKnown RBP22.26■■□□□ 1.15
NR1H3-234ENST00000532630 LMOD2Q6P5Q4 547 aa22.26■■□□□ 1.15
NR1H3-234ENST00000532630 USP32Q8NFA0 1604 aa22.26■■□□□ 1.15
NR1H3-234ENST00000532630 BRWD3Q6RI45 1802 aa22.25■■□□□ 1.15
NR1H3-234ENST00000532630 PSME1Q06323 249 aa22.24■■□□□ 1.15
NR1H3-234ENST00000532630 CFAP70Q5T0N1 1121 aa22.24■■□□□ 1.15
NR1H3-234ENST00000532630 C14orf93Q9H972 538 aaKnown RBP22.24■■□□□ 1.15
NR1H3-234ENST00000532630 PHF8Q9UPP1 1060 aa22.24■■□□□ 1.15
NR1H3-234ENST00000532630 UNC5CLQ8IV45 518 aa22.23■■□□□ 1.15
NR1H3-234ENST00000532630 ZRANB1Q9UGI0 708 aa22.23■■□□□ 1.15
NR1H3-234ENST00000532630 POGKQ9P215 609 aa22.22■■□□□ 1.15
NR1H3-234ENST00000532630 PLCH1Q4KWH8 1693 aa22.22■■□□□ 1.15
NR1H3-234ENST00000532630 EP400Q96L91 3159 aa22.22■■□□□ 1.15
NR1H3-234ENST00000532630 ACIN1Q9UKV3 1341 aaKnown RBP22.22■■□□□ 1.15
NR1H3-234ENST00000532630 GLI3P10071 1580 aa22.21■■□□□ 1.15
NR1H3-234ENST00000532630 SIRT1Q96EB6 747 aa22.21■■□□□ 1.15
NR1H3-234ENST00000532630 PRAM1Q96QH2 718 aa22.21■■□□□ 1.15
NR1H3-234ENST00000532630 CCDC9Q9Y3X0 531 aaKnown RBP22.21■■□□□ 1.15
NR1H3-234ENST00000532630 TNS3Q68CZ2 1445 aa22.21■■□□□ 1.15
NR1H3-234ENST00000532630 RALGAPBQ86X10 1494 aa22.21■■□□□ 1.15
NR1H3-234ENST00000532630 CCDC125Q86Z20 511 aa22.2■■□□□ 1.14
NR1H3-234ENST00000532630 CABLES1Q8TDN4 633 aa22.2■■□□□ 1.14
NR1H3-234ENST00000532630 SLIT2O94813 1529 aa22.2■■□□□ 1.14
NR1H3-234ENST00000532630 ABCA3Q99758 1704 aa22.2■■□□□ 1.14
NR1H3-234ENST00000532630 NWD2Q9ULI1 1742 aa22.18■■□□□ 1.14
NR1H3-234ENST00000532630 NRXN1Q9ULB1 1477 aa22.17■■□□□ 1.14
NR1H3-234ENST00000532630 PMFBP1Q8TBY8 1022 aa22.17■■□□□ 1.14
NR1H3-234ENST00000532630 ARHGEF10O15013 1369 aa22.14■■□□□ 1.14
NR1H3-234ENST00000532630 A0A0G2JS52 829 aa22.14■■□□□ 1.13
NR1H3-234ENST00000532630 MYT1Q01538 1121 aa22.14■■□□□ 1.13
NR1H3-234ENST00000532630 SF3B2Q13435 895 aaKnown RBP22.14■■□□□ 1.13
NR1H3-234ENST00000532630 SBNO1A3KN83 1393 aa22.13■■□□□ 1.13
NR1H3-234ENST00000532630 DLC1Q96QB1 1528 aa22.13■■□□□ 1.13
NR1H3-234ENST00000532630 TRAK1Q9UPV9 953 aa22.13■■□□□ 1.13
NR1H3-234ENST00000532630 KDM2AQ9Y2K7 1162 aa22.13■■□□□ 1.13
NR1H3-234ENST00000532630 RAB3GAP2Q9H2M9 1393 aa22.12■■□□□ 1.13
NR1H3-234ENST00000532630 SEPT12Q8IYM1 358 aa22.12■■□□□ 1.13
NR1H3-234ENST00000532630 HIRIP3Q9BW71 556 aaPredicted RBP22.12■■□□□ 1.13
NR1H3-234ENST00000532630 VPS72Q15906 364 aa22.11■■□□□ 1.13
NR1H3-234ENST00000532630 BLMP54132 1417 aaPredicted RBP22.11■■□□□ 1.13
NR1H3-234ENST00000532630 ANKARQ7Z5J8 1434 aa22.11■■□□□ 1.13
NR1H3-234ENST00000532630 MINK1Q8N4C8 1332 aaPredicted RBP22.1■■□□□ 1.13
NR1H3-234ENST00000532630 ADGRB2O60241 1585 aa22.1■■□□□ 1.13
NR1H3-234ENST00000532630 TRPM3Q9HCF6 1732 aaPredicted RBP22.09■■□□□ 1.13
NR1H3-234ENST00000532630 GPRASP1Q5JY77 1395 aa22.08■■□□□ 1.12
NR1H3-234ENST00000532630 DEFB132Q7Z7B7 95 aa22.07■■□□□ 1.12
NR1H3-234ENST00000532630 DCAF11Q8TEB1 546 aa22.07■■□□□ 1.12
NR1H3-234ENST00000532630 EIF3AQ14152 1382 aaKnown RBP22.07■■□□□ 1.12
NR1H3-234ENST00000532630 ADGRB1O14514 1584 aa22.07■■□□□ 1.12
NR1H3-234ENST00000532630 NRAPQ86VF7 1730 aa22.06■■□□□ 1.12
NR1H3-234ENST00000532630 ALS2Q96Q42 1657 aa22.05■■□□□ 1.12
NR1H3-234ENST00000532630 FAM83GA6ND36 823 aa22.05■■□□□ 1.12
NR1H3-234ENST00000532630 KRT27Q7Z3Y8 459 aa22.05■■□□□ 1.12
NR1H3-234ENST00000532630 ITSN1Q15811 1721 aa22.05■■□□□ 1.12
NR1H3-234ENST00000532630 COL14A1Q05707 1796 aaKnown RBP22.04■■□□□ 1.12
NR1H3-234ENST00000532630 SRCAPQ6ZRS2 3230 aa22.04■■□□□ 1.12
NR1H3-234ENST00000532630 PAK3O75914 559 aaPredicted RBP22.04■■□□□ 1.12
NR1H3-234ENST00000532630 NGDNQ8NEJ9 315 aaKnown RBP22.04■■□□□ 1.12
NR1H3-234ENST00000532630 TULP4Q9NRJ4 1543 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms