RNA–Protein interactions for RNA: ENST00000532461.5

RDX-213, Transcript of radixin, humanhuman

TSL 1 (best)

Gene RDX, Length 3,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-213ENST00000532461 AKAP12Q02952 1782 aa7.7□□□□□ -1.18
RDX-213ENST00000532461 KDM2BQ8NHM5 1336 aa7.7□□□□□ -1.18
RDX-213ENST00000532461 ARHGEF40Q8TER5 1519 aa7.7□□□□□ -1.18
RDX-213ENST00000532461 CFAP70Q5T0N1 1121 aa7.7□□□□□ -1.18
RDX-213ENST00000532461 PPP6R1Q9UPN7 881 aa7.7□□□□□ -1.18
RDX-213ENST00000532461 CENPJQ9HC77 1338 aaPredicted RBP7.69□□□□□ -1.18
RDX-213ENST00000532461 MON2Q7Z3U7 1717 aa7.69□□□□□ -1.18
RDX-213ENST00000532461 CD163L1Q9NR16 1453 aa7.69□□□□□ -1.18
RDX-213ENST00000532461 ANKRD36BQ8N2N9 1353 aa7.69□□□□□ -1.18
RDX-213ENST00000532461 SLFN5Q08AF3 891 aa7.69□□□□□ -1.18
RDX-213ENST00000532461 CC2D1BQ5T0F9 858 aaKnown RBP7.69□□□□□ -1.18
RDX-213ENST00000532461 POLR3GLQ9BT43 218 aa7.69□□□□□ -1.18
RDX-213ENST00000532461 TCERG1O14776 1098 aaKnown RBP7.69□□□□□ -1.18
RDX-213ENST00000532461 CCDC136Q96JN2 1154 aa7.68□□□□□ -1.18
RDX-213ENST00000532461 ZMYM3Q14202 1370 aa7.67□□□□□ -1.18
RDX-213ENST00000532461 CCDC27Q2M243 656 aa7.67□□□□□ -1.18
RDX-213ENST00000532461 CDCA7LQ96GN5 454 aa7.67□□□□□ -1.18
RDX-213ENST00000532461 SLC52A1Q9NWF4 448 aa7.67□□□□□ -1.18
RDX-213ENST00000532461 RIMS1Q86UR5 1692 aaKnown RBP7.67□□□□□ -1.18
RDX-213ENST00000532461 TOPAZ1Q8N9V7 1692 aa7.67□□□□□ -1.18
RDX-213ENST00000532461 ABCC11Q96J66 1382 aa7.67□□□□□ -1.18
RDX-213ENST00000532461 YEATS2Q9ULM3 1422 aa7.67□□□□□ -1.18
RDX-213ENST00000532461 NPM1P06748 294 aaKnown RBP eCLIP7.67□□□□□ -1.18
RDX-213ENST00000532461 NSD3Q9BZ95 1437 aa7.67□□□□□ -1.18
RDX-213ENST00000532461 CPS1P31327 1500 aa7.66□□□□□ -1.18
RDX-213ENST00000532461 ADRA2BP18089 450 aa7.66□□□□□ -1.18
RDX-213ENST00000532461 EXOC6Q8TAG9 804 aa7.66□□□□□ -1.18
RDX-213ENST00000532461 NRKQ7Z2Y5 1582 aa7.66□□□□□ -1.18
RDX-213ENST00000532461 GOLGA2Q08379 1002 aa7.65□□□□□ -1.18
RDX-213ENST00000532461 MYT1LQ9UL68 1186 aa7.65□□□□□ -1.18
RDX-213ENST00000532461 C3P01024 1663 aa7.65□□□□□ -1.18
RDX-213ENST00000532461 VGFO15240 615 aaPredicted RBP7.65□□□□□ -1.18
RDX-213ENST00000532461 UBR1Q8IWV7 1749 aa7.65□□□□□ -1.19
RDX-213ENST00000532461 NALCNQ8IZF0 1738 aa7.65□□□□□ -1.19
RDX-213ENST00000532461 AAMPQ13685 434 aa7.65□□□□□ -1.19
RDX-213ENST00000532461 ATP7BP35670 1465 aa7.65□□□□□ -1.19
RDX-213ENST00000532461 USP54Q70EL1 1684 aa7.64□□□□□ -1.19
RDX-213ENST00000532461 A2ML1A8K2U0 1454 aa7.64□□□□□ -1.19
RDX-213ENST00000532461 PNPLA6Q8IY17 1366 aa7.64□□□□□ -1.19
RDX-213ENST00000532461 ITSN1Q15811 1721 aa7.64□□□□□ -1.19
RDX-213ENST00000532461 TECPR2O15040 1411 aa7.64□□□□□ -1.19
RDX-213ENST00000532461 E9PSI1 815 aa7.64□□□□□ -1.19
RDX-213ENST00000532461 WDR43Q15061 677 aaKnown RBP eCLIP7.64□□□□□ -1.19
RDX-213ENST00000532461 YTHDC2Q9H6S0 1430 aaKnown RBP7.64□□□□□ -1.19
RDX-213ENST00000532461 CGNL1Q0VF96 1302 aa7.63□□□□□ -1.19
RDX-213ENST00000532461 BACH2Q9BYV9 841 aa7.63□□□□□ -1.19
RDX-213ENST00000532461 MAP2P11137 1827 aaKnown RBP7.62□□□□□ -1.19
RDX-213ENST00000532461 EVC2Q86UK5 1308 aa7.62□□□□□ -1.19
RDX-213ENST00000532461 ATAD2Q6PL18 1390 aa7.62□□□□□ -1.19
RDX-213ENST00000532461 WDR63Q8IWG1 891 aa7.62□□□□□ -1.19
RDX-213ENST00000532461 IPO9Q96P70 1041 aaKnown RBP7.62□□□□□ -1.19
RDX-213ENST00000532461 TSPOAP1O95153 1857 aa7.62□□□□□ -1.19
RDX-213ENST00000532461 PDE3AQ14432 1141 aa7.61□□□□□ -1.19
RDX-213ENST00000532461 CENPQQ7L2Z9 268 aaPredicted RBP7.61□□□□□ -1.19
RDX-213ENST00000532461 RGPD1P0DJD0 1748 aa7.61□□□□□ -1.19
RDX-213ENST00000532461 CRBNQ96SW2 442 aa7.61□□□□□ -1.19
RDX-213ENST00000532461 DLG5Q8TDM6 1919 aa7.61□□□□□ -1.19
RDX-213ENST00000532461 PPIP5K1Q6PFW1 1433 aa7.6□□□□□ -1.19
RDX-213ENST00000532461 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.6□□□□□ -1.19
RDX-213ENST00000532461 FAM135BQ49AJ0 1406 aa7.6□□□□□ -1.19
RDX-213ENST00000532461 IDI1Q13907 227 aa7.6□□□□□ -1.19
RDX-213ENST00000532461 WWC1Q8IX03 1113 aa7.6□□□□□ -1.19
RDX-213ENST00000532461 RUNDC1Q96C34 613 aa7.6□□□□□ -1.19
RDX-213ENST00000532461 SIRT1Q96EB6 747 aa7.6□□□□□ -1.19
RDX-213ENST00000532461 A0A1W2PP64 1363 aa7.6□□□□□ -1.19
RDX-213ENST00000532461 SPINK5Q9NQ38 1064 aaPredicted RBP7.6□□□□□ -1.19
RDX-213ENST00000532461 LRRC7Q96NW7 1537 aa7.59□□□□□ -1.19
RDX-213ENST00000532461 CPSF1Q10570 1443 aaKnown RBP7.59□□□□□ -1.19
RDX-213ENST00000532461 RAPGEF3O95398 923 aa7.59□□□□□ -1.19
RDX-213ENST00000532461 CT47B1P0C2W7 299 aaPredicted RBP7.59□□□□□ -1.19
RDX-213ENST00000532461 NOP58Q9Y2X3 529 aaKnown RBP7.59□□□□□ -1.19
RDX-213ENST00000532461 PDE4AP27815 886 aa7.58□□□□□ -1.2
RDX-213ENST00000532461 IL16Q14005 1332 aa7.58□□□□□ -1.2
RDX-213ENST00000532461 C20orf194Q5TEA3 1177 aa7.58□□□□□ -1.2
RDX-213ENST00000532461 PLEKHF1Q96S99 279 aa7.58□□□□□ -1.2
RDX-213ENST00000532461 FMN2Q9NZ56 1722 aa7.58□□□□□ -1.2
RDX-213ENST00000532461 APAF1O14727 1248 aa7.57□□□□□ -1.2
RDX-213ENST00000532461 GGT6Q6P531 493 aa7.57□□□□□ -1.2
RDX-213ENST00000532461 SLC12A5Q9H2X9 1139 aa7.57□□□□□ -1.2
RDX-213ENST00000532461 CDK12Q9NYV4 1490 aaPredicted RBP7.57□□□□□ -1.2
RDX-213ENST00000532461 TRAK1Q9UPV9 953 aa7.57□□□□□ -1.2
RDX-213ENST00000532461 N4BP2Q86UW6 1770 aaPredicted RBP7.57□□□□□ -1.2
RDX-213ENST00000532461 DIP2AQ14689 1571 aa7.56□□□□□ -1.2
RDX-213ENST00000532461 MORC1Q86VD1 984 aa7.56□□□□□ -1.2
RDX-213ENST00000532461 DMRT2Q9Y5R5 561 aa7.56□□□□□ -1.2
RDX-213ENST00000532461 AATKQ6ZMQ8 1374 aa7.56□□□□□ -1.2
RDX-213ENST00000532461 PLIN1O60240 522 aa7.56□□□□□ -1.2
RDX-213ENST00000532461 CNGB1Q14028 1251 aaPredicted RBP7.56□□□□□ -1.2
RDX-213ENST00000532461 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.56□□□□□ -1.2
RDX-213ENST00000532461 MARF1Q9Y4F3 1742 aaKnown RBP7.56□□□□□ -1.2
RDX-213ENST00000532461 RIMS2Q9UQ26 1411 aa7.56□□□□□ -1.2
RDX-213ENST00000532461 ANP32AP39687 249 aaKnown RBP7.55□□□□□ -1.2
RDX-213ENST00000532461 BRPF1P55201 1214 aaPredicted RBP7.55□□□□□ -1.2
RDX-213ENST00000532461 TMEM132EQ6IEE7 984 aa7.55□□□□□ -1.2
RDX-213ENST00000532461 SLIT1O75093 1534 aa7.55□□□□□ -1.2
RDX-213ENST00000532461 EDC4Q6P2E9 1401 aaKnown RBP7.54□□□□□ -1.2
RDX-213ENST00000532461 RARSP54136 660 aaKnown RBP7.54□□□□□ -1.2
RDX-213ENST00000532461 C8orf34Q49A92 452 aa7.54□□□□□ -1.2
RDX-213ENST00000532461 XRN1Q8IZH2 1706 aaKnown RBP7.54□□□□□ -1.2
RDX-213ENST00000532461 CFAP53Q96M91 514 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 189.2 ms