RNA–Protein interactions for RNA: ENST00000532069.5

CLNS1A-211, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 898 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-211ENST00000532069 ZNF326Q5BKZ1 582 aaKnown RBP20.21■□□□□ 0.83
CLNS1A-211ENST00000532069 ORAI2Q96SN7 254 aa20.21■□□□□ 0.83
CLNS1A-211ENST00000532069 RALGAPBQ86X10 1494 aa20.2■□□□□ 0.82
CLNS1A-211ENST00000532069 UNC5CLQ8IV45 518 aa20.2■□□□□ 0.82
CLNS1A-211ENST00000532069 HRCP23327 699 aa20.19■□□□□ 0.82
CLNS1A-211ENST00000532069 GLI3P10071 1580 aa20.19■□□□□ 0.82
CLNS1A-211ENST00000532069 LRPPRCP42704 1394 aaKnown RBP20.18■□□□□ 0.82
CLNS1A-211ENST00000532069 PSDA5PKW4 1024 aaPredicted RBP20.15■□□□□ 0.82
CLNS1A-211ENST00000532069 SLIT2O94813 1529 aa20.15■□□□□ 0.82
CLNS1A-211ENST00000532069 YY1P25490 414 aa20.14■□□□□ 0.81
CLNS1A-211ENST00000532069 SEPT12Q8IYM1 358 aa20.14■□□□□ 0.81
CLNS1A-211ENST00000532069 PXDNQ92626 1479 aa20.12■□□□□ 0.81
CLNS1A-211ENST00000532069 HFM1A2PYH4 1435 aa20.12■□□□□ 0.81
CLNS1A-211ENST00000532069 ESCO1Q5FWF5 840 aa20.12■□□□□ 0.81
CLNS1A-211ENST00000532069 KRT27Q7Z3Y8 459 aa20.12■□□□□ 0.81
CLNS1A-211ENST00000532069 FAM50AQ14320 339 aaKnown RBP20.1■□□□□ 0.81
CLNS1A-211ENST00000532069 PRAG1Q86YV5 1406 aa20.1■□□□□ 0.81
CLNS1A-211ENST00000532069 CDC42BPGQ6DT37 1551 aa20.09■□□□□ 0.81
CLNS1A-211ENST00000532069 RGPD1P0DJD0 1748 aa20.09■□□□□ 0.81
CLNS1A-211ENST00000532069 USP32Q8NFA0 1604 aa20.09■□□□□ 0.81
CLNS1A-211ENST00000532069 NEXMIFQ5QGS0 1516 aa20.08■□□□□ 0.81
CLNS1A-211ENST00000532069 NWD2Q9ULI1 1742 aa20.08■□□□□ 0.81
CLNS1A-211ENST00000532069 DCAF8L1A6NGE4 600 aa20.08■□□□□ 0.81
CLNS1A-211ENST00000532069 VPS72Q15906 364 aa20.08■□□□□ 0.81
CLNS1A-211ENST00000532069 CCDC9Q9Y3X0 531 aaKnown RBP20.08■□□□□ 0.81
CLNS1A-211ENST00000532069 NUP155O75694 1391 aa20.08■□□□□ 0.8
CLNS1A-211ENST00000532069 HAP1P54257 671 aaPredicted RBP20.07■□□□□ 0.8
CLNS1A-211ENST00000532069 ROBO2Q9HCK4 1378 aa20.07■□□□□ 0.8
CLNS1A-211ENST00000532069 ONECUT3O60422 494 aaPredicted RBP20.06■□□□□ 0.8
CLNS1A-211ENST00000532069 KIF1BO60333 1816 aa20.06■□□□□ 0.8
CLNS1A-211ENST00000532069 FOXO3O43524 673 aa20.05■□□□□ 0.8
CLNS1A-211ENST00000532069 A0A0G2JS52 829 aa20.04■□□□□ 0.8
CLNS1A-211ENST00000532069 MYT1Q01538 1121 aa20.04■□□□□ 0.8
CLNS1A-211ENST00000532069 VGFO15240 615 aaPredicted RBP20.03■□□□□ 0.8
CLNS1A-211ENST00000532069 R3HDM1Q15032 1099 aaKnown RBP20.03■□□□□ 0.8
CLNS1A-211ENST00000532069 ROCK1Q13464 1354 aa20.02■□□□□ 0.8
CLNS1A-211ENST00000532069 KIF1AQ12756 1690 aa20.02■□□□□ 0.8
CLNS1A-211ENST00000532069 PLCH1Q4KWH8 1693 aa20.02■□□□□ 0.8
CLNS1A-211ENST00000532069 CCDC144AA2RUR9 1427 aa20.02■□□□□ 0.79
CLNS1A-211ENST00000532069 XPCQ01831 940 aaPredicted RBP20.01■□□□□ 0.79
CLNS1A-211ENST00000532069 SPATA31A3Q5VYP0 1347 aa20.01■□□□□ 0.79
CLNS1A-211ENST00000532069 EN1Q05925 392 aaPredicted RBP19.99■□□□□ 0.79
CLNS1A-211ENST00000532069 DISP2A7MBM2 1401 aa19.99■□□□□ 0.79
CLNS1A-211ENST00000532069 ADGRB2O60241 1585 aa19.98■□□□□ 0.79
CLNS1A-211ENST00000532069 CLTCL1P53675 1640 aa19.96■□□□□ 0.79
CLNS1A-211ENST00000532069 PSME1Q06323 249 aa19.94■□□□□ 0.78
CLNS1A-211ENST00000532069 NAIPQ13075 1403 aa19.93■□□□□ 0.78
CLNS1A-211ENST00000532069 PARD3Q8TEW0 1356 aa19.93■□□□□ 0.78
CLNS1A-211ENST00000532069 TNS3Q68CZ2 1445 aa19.93■□□□□ 0.78
CLNS1A-211ENST00000532069 KRT28Q7Z3Y7 464 aa19.92■□□□□ 0.78
CLNS1A-211ENST00000532069 TNS1Q9HBL0 1735 aaKnown RBP19.92■□□□□ 0.78
CLNS1A-211ENST00000532069 RPGRIP1LQ68CZ1 1315 aa19.92■□□□□ 0.78
CLNS1A-211ENST00000532069 FAM98CQ17RN3 349 aaKnown RBP19.91■□□□□ 0.78
CLNS1A-211ENST00000532069 PPP1R1BQ9UD71 204 aaPredicted RBP19.91■□□□□ 0.78
CLNS1A-211ENST00000532069 ARHGEF10O15013 1369 aa19.9■□□□□ 0.78
CLNS1A-211ENST00000532069 ABCA3Q99758 1704 aa19.9■□□□□ 0.78
CLNS1A-211ENST00000532069 FMN2Q9NZ56 1722 aa19.89■□□□□ 0.77
CLNS1A-211ENST00000532069 NUTM2FA1L443 756 aa19.88■□□□□ 0.77
CLNS1A-211ENST00000532069 NRAPQ86VF7 1730 aa19.88■□□□□ 0.77
CLNS1A-211ENST00000532069 NINLQ9Y2I6 1382 aa19.87■□□□□ 0.77
CLNS1A-211ENST00000532069 EZH2Q15910 746 aaKnown RBP19.87■□□□□ 0.77
CLNS1A-211ENST00000532069 NBPF8Q3BBV2 869 aa19.86■□□□□ 0.77
CLNS1A-211ENST00000532069 NBPF14Q5TI25 921 aa19.86■□□□□ 0.77
CLNS1A-211ENST00000532069 PPLO60437 1756 aa19.85■□□□□ 0.77
CLNS1A-211ENST00000532069 SBNO1A3KN83 1393 aa19.85■□□□□ 0.77
CLNS1A-211ENST00000532069 IFFO2Q5TF58 517 aa19.85■□□□□ 0.77
CLNS1A-211ENST00000532069 LMOD2Q6P5Q4 547 aa19.84■□□□□ 0.77
CLNS1A-211ENST00000532069 CABLES1Q8TDN4 633 aa19.84■□□□□ 0.77
CLNS1A-211ENST00000532069 COL14A1Q05707 1796 aaKnown RBP19.84■□□□□ 0.77
CLNS1A-211ENST00000532069 TECPR2O15040 1411 aa19.84■□□□□ 0.77
CLNS1A-211ENST00000532069 KNDC1Q76NI1 1749 aa19.83■□□□□ 0.77
CLNS1A-211ENST00000532069 SPON1Q9HCB6 807 aa19.83■□□□□ 0.77
CLNS1A-211ENST00000532069 FAM196AQ6ZSG2 479 aa19.82■□□□□ 0.76
CLNS1A-211ENST00000532069 CAMKK2Q96RR4 588 aa19.82■□□□□ 0.76
CLNS1A-211ENST00000532069 BTG4Q9NY30 223 aa19.82■□□□□ 0.76
CLNS1A-211ENST00000532069 RREB1Q92766 1687 aa19.81■□□□□ 0.76
CLNS1A-211ENST00000532069 PHF8Q9UPP1 1060 aa19.81■□□□□ 0.76
CLNS1A-211ENST00000532069 THSD7AQ9UPZ6 1657 aa19.81■□□□□ 0.76
CLNS1A-211ENST00000532069 LOC105371045A0A1W2PR82 267 aa19.8■□□□□ 0.76
CLNS1A-211ENST00000532069 FAM83GA6ND36 823 aa19.8■□□□□ 0.76
CLNS1A-211ENST00000532069 IFT172Q9UG01 1749 aa19.79■□□□□ 0.76
CLNS1A-211ENST00000532069 SENP3-EIF4A1A0A087X0R7 540 aa19.79■□□□□ 0.76
CLNS1A-211ENST00000532069 PLEKHG5O94827 1062 aa19.79■□□□□ 0.76
CLNS1A-211ENST00000532069 APBA3O96018 575 aa19.79■□□□□ 0.76
CLNS1A-211ENST00000532069 RRBP1Q9P2E9 1410 aaKnown RBP19.78■□□□□ 0.76
CLNS1A-211ENST00000532069 FAM182BQ5T319 152 aa19.78■□□□□ 0.76
CLNS1A-211ENST00000532069 WAPLQ7Z5K2 1190 aa19.78■□□□□ 0.76
CLNS1A-211ENST00000532069 SPATA31A5Q5VU36 1347 aa19.77■□□□□ 0.76
CLNS1A-211ENST00000532069 SPATA31A7Q8IWB4 1347 aa19.77■□□□□ 0.76
CLNS1A-211ENST00000532069 NUP188Q5SRE5 1749 aa19.77■□□□□ 0.76
CLNS1A-211ENST00000532069 KCNQ2O43526 872 aa19.77■□□□□ 0.76
CLNS1A-211ENST00000532069 TRIM37O94972 964 aa19.77■□□□□ 0.76
CLNS1A-211ENST00000532069 STK26Q9P289 416 aa19.77■□□□□ 0.76
CLNS1A-211ENST00000532069 ABCC11Q96J66 1382 aa19.77■□□□□ 0.76
CLNS1A-211ENST00000532069 NRXN1Q9ULB1 1477 aa19.77■□□□□ 0.76
CLNS1A-211ENST00000532069 RGPD8O14715 1765 aaPredicted RBP19.77■□□□□ 0.76
CLNS1A-211ENST00000532069 ZNF784Q8NCA9 323 aaPredicted RBP19.72■□□□□ 0.75
CLNS1A-211ENST00000532069 ITGAEP38570 1179 aa19.71■□□□□ 0.75
CLNS1A-211ENST00000532069 SIRT1Q96EB6 747 aa19.7■□□□□ 0.74
CLNS1A-211ENST00000532069 CAMTA1Q9Y6Y1 1673 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms