RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 KLHL40Q2TBA0 621 aa9.67□□□□□ -0.86
PTPRK-219ENST00000531050 NGEFQ8N5V2 710 aa9.67□□□□□ -0.86
PTPRK-219ENST00000531050 MPHOSPH9Q99550 1183 aa9.67□□□□□ -0.86
PTPRK-219ENST00000531050 BCL2L12Q9HB09 334 aa9.67□□□□□ -0.86
PTPRK-219ENST00000531050 CCDC39Q9UFE4 941 aa9.67□□□□□ -0.86
PTPRK-219ENST00000531050 DAPK1P53355 1430 aa9.67□□□□□ -0.86
PTPRK-219ENST00000531050 ARID3CA6NKF2 412 aa9.67□□□□□ -0.86
PTPRK-219ENST00000531050 HSCBQ8IWL3 235 aa9.67□□□□□ -0.86
PTPRK-219ENST00000531050 SMC5Q8IY18 1101 aa9.67□□□□□ -0.86
PTPRK-219ENST00000531050 ZBTB9Q96C00 473 aa9.67□□□□□ -0.86
PTPRK-219ENST00000531050 C22orf23Q9BZE7 217 aa9.67□□□□□ -0.86
PTPRK-219ENST00000531050 PARD3Q8TEW0 1356 aa9.67□□□□□ -0.86
PTPRK-219ENST00000531050 CEP170Q5SW79 1584 aa9.67□□□□□ -0.86
PTPRK-219ENST00000531050 SLFN14P0C7P3 912 aa9.66□□□□□ -0.86
PTPRK-219ENST00000531050 GABPB1Q06547 395 aaPredicted RBP9.66□□□□□ -0.86
PTPRK-219ENST00000531050 CHMP4CQ96CF2 233 aa9.66□□□□□ -0.86
PTPRK-219ENST00000531050 TIGD1Q96MW7 591 aa9.66□□□□□ -0.86
PTPRK-219ENST00000531050 BCCIPQ9P287 314 aaKnown RBP eCLIP9.66□□□□□ -0.86
PTPRK-219ENST00000531050 KIF3AQ9Y496 699 aa9.66□□□□□ -0.86
PTPRK-219ENST00000531050 ANKRD30BQ9BXX2 1392 aa9.66□□□□□ -0.86
PTPRK-219ENST00000531050 MAGI1Q96QZ7 1491 aaPredicted RBP9.66□□□□□ -0.86
PTPRK-219ENST00000531050 ROCK1Q13464 1354 aa9.65□□□□□ -0.86
PTPRK-219ENST00000531050 TRIM6-TRIM34B2RNG4 842 aa9.65□□□□□ -0.86
PTPRK-219ENST00000531050 KIAA2012Q0VF49 1180 aa9.65□□□□□ -0.86
PTPRK-219ENST00000531050 TRIM34Q9BYJ4 488 aa9.65□□□□□ -0.86
PTPRK-219ENST00000531050 HDAC5Q9UQL6 1122 aa9.65□□□□□ -0.86
PTPRK-219ENST00000531050 NINLQ9Y2I6 1382 aa9.65□□□□□ -0.86
PTPRK-219ENST00000531050 ANKRD7Q92527 254 aa9.65□□□□□ -0.86
PTPRK-219ENST00000531050 ABCC5O15440 1437 aa9.65□□□□□ -0.87
PTPRK-219ENST00000531050 ARHGAP31Q2M1Z3 1444 aa9.65□□□□□ -0.87
PTPRK-219ENST00000531050 CCDC66A2RUB6 948 aa9.64□□□□□ -0.87
PTPRK-219ENST00000531050 FEZ1Q99689 392 aa9.64□□□□□ -0.87
PTPRK-219ENST00000531050 OGFRQ9NZT2 677 aa9.64□□□□□ -0.87
PTPRK-219ENST00000531050 ITSN2Q9NZM3 1697 aa9.64□□□□□ -0.87
PTPRK-219ENST00000531050 ADCY10Q96PN6 1610 aa9.64□□□□□ -0.87
PTPRK-219ENST00000531050 KDM5CP41229 1560 aa9.64□□□□□ -0.87
PTPRK-219ENST00000531050 ZSCAN23Q3MJ62 389 aa9.64□□□□□ -0.87
PTPRK-219ENST00000531050 YY1AP1Q9H869 796 aa9.64□□□□□ -0.87
PTPRK-219ENST00000531050 DDX49Q9Y6V7 483 aaKnown RBP9.64□□□□□ -0.87
PTPRK-219ENST00000531050 PLEKHH1Q9ULM0 1364 aa9.64□□□□□ -0.87
PTPRK-219ENST00000531050 MYCNP04198 464 aaPredicted RBP9.63□□□□□ -0.87
PTPRK-219ENST00000531050 GEMIN8Q9NWZ8 242 aaKnown RBP9.63□□□□□ -0.87
PTPRK-219ENST00000531050 SYNJ2O15056 1496 aa9.63□□□□□ -0.87
PTPRK-219ENST00000531050 ZBTB7CA1YPR0 619 aa9.63□□□□□ -0.87
PTPRK-219ENST00000531050 ADRA2BP18089 450 aa9.63□□□□□ -0.87
PTPRK-219ENST00000531050 CLEC17AQ6ZS10 378 aa9.63□□□□□ -0.87
PTPRK-219ENST00000531050 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.63□□□□□ -0.87
PTPRK-219ENST00000531050 ADGBQ8N7X0 1667 aa9.63□□□□□ -0.87
PTPRK-219ENST00000531050 CROCC2H7BZ55 1655 aa9.62□□□□□ -0.87
PTPRK-219ENST00000531050 MBD5Q9P267 1494 aa9.62□□□□□ -0.87
PTPRK-219ENST00000531050 PRIM1P49642 420 aaKnown RBP9.62□□□□□ -0.87
PTPRK-219ENST00000531050 CNPY4Q8N129 248 aa9.62□□□□□ -0.87
PTPRK-219ENST00000531050 SNX21Q969T3 373 aa9.62□□□□□ -0.87
PTPRK-219ENST00000531050 TROQ12816 1431 aaPredicted RBP9.62□□□□□ -0.87
PTPRK-219ENST00000531050 ZNF521Q96K83 1311 aa9.62□□□□□ -0.87
PTPRK-219ENST00000531050 E9PCH4 1651 aa9.62□□□□□ -0.87
PTPRK-219ENST00000531050 KIF14Q15058 1648 aa9.62□□□□□ -0.87
PTPRK-219ENST00000531050 CLGNO14967 610 aa9.62□□□□□ -0.87
PTPRK-219ENST00000531050 CLUAP1Q96AJ1 413 aa9.62□□□□□ -0.87
PTPRK-219ENST00000531050 CAMSAP2Q08AD1 1489 aa9.62□□□□□ -0.87
PTPRK-219ENST00000531050 KIAA1107Q9UPP5 1409 aa9.61□□□□□ -0.87
PTPRK-219ENST00000531050 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.61□□□□□ -0.87
PTPRK-219ENST00000531050 SSFA2P28290 1259 aa9.61□□□□□ -0.87
PTPRK-219ENST00000531050 MFAP1P55081 439 aaKnown RBP9.61□□□□□ -0.87
PTPRK-219ENST00000531050 PLB1Q6P1J6 1458 aa9.61□□□□□ -0.87
PTPRK-219ENST00000531050 CGNL1Q0VF96 1302 aa9.61□□□□□ -0.87
PTPRK-219ENST00000531050 PRG4Q92954 1404 aaPredicted RBP9.61□□□□□ -0.87
PTPRK-219ENST00000531050 BCAR3O75815 825 aa9.6□□□□□ -0.87
PTPRK-219ENST00000531050 BAG4O95429 457 aaKnown RBP9.6□□□□□ -0.87
PTPRK-219ENST00000531050 TERF2Q15554 542 aa9.6□□□□□ -0.87
PTPRK-219ENST00000531050 CAVIN1Q6NZI2 390 aaKnown RBP9.6□□□□□ -0.87
PTPRK-219ENST00000531050 PIBF1Q8WXW3 757 aa9.6□□□□□ -0.87
PTPRK-219ENST00000531050 PDZRN3Q9UPQ7 1066 aa9.6□□□□□ -0.87
PTPRK-219ENST00000531050 ZNF644Q9H582 1327 aaPredicted RBP9.6□□□□□ -0.87
PTPRK-219ENST00000531050 NUP160Q12769 1436 aa9.6□□□□□ -0.87
PTPRK-219ENST00000531050 GOLGA6L22H0YM25 854 aa9.6□□□□□ -0.87
PTPRK-219ENST00000531050 NOLC1Q14978 699 aaKnown RBP eCLIP9.59□□□□□ -0.873e-6■■■□□ 16.8
PTPRK-219ENST00000531050 TSPYL1Q9H0U9 437 aa9.59□□□□□ -0.87
PTPRK-219ENST00000531050 FEZ2Q9UHY8 353 aaPredicted RBP9.59□□□□□ -0.87
PTPRK-219ENST00000531050 MLECQ14165 292 aa9.59□□□□□ -0.87
PTPRK-219ENST00000531050 CALCOCO1Q9P1Z2 691 aa9.59□□□□□ -0.87
PTPRK-219ENST00000531050 CTIFO43310 598 aaKnown RBP9.58□□□□□ -0.88
PTPRK-219ENST00000531050 GOLGA2Q08379 1002 aa9.58□□□□□ -0.88
PTPRK-219ENST00000531050 SLFN5Q08AF3 891 aa9.58□□□□□ -0.88
PTPRK-219ENST00000531050 FKBP5Q13451 457 aaPredicted RBP9.58□□□□□ -0.88
PTPRK-219ENST00000531050 TRMT2AQ8IZ69 625 aaKnown RBP9.58□□□□□ -0.88
PTPRK-219ENST00000531050 EFCC1Q9HA90 598 aa9.58□□□□□ -0.88
PTPRK-219ENST00000531050 SPTLC3Q9NUV7 552 aa9.58□□□□□ -0.88
PTPRK-219ENST00000531050 GPATCH8Q9UKJ3 1502 aaKnown RBP9.58□□□□□ -0.88
PTPRK-219ENST00000531050 PRR29P0C7W0 189 aa9.58□□□□□ -0.88
PTPRK-219ENST00000531050 WWC1Q8IX03 1113 aa9.58□□□□□ -0.88
PTPRK-219ENST00000531050 CTNNA3Q9UI47 895 aa9.58□□□□□ -0.88
PTPRK-219ENST00000531050 ADGRL2O95490 1459 aa9.58□□□□□ -0.88
PTPRK-219ENST00000531050 PZPP20742 1482 aa9.58□□□□□ -0.88
PTPRK-219ENST00000531050 C17orf53Q8N3J3 647 aaPredicted RBP9.57□□□□□ -0.88
PTPRK-219ENST00000531050 DDX41Q9UJV9 622 aaKnown RBP9.57□□□□□ -0.88
PTPRK-219ENST00000531050 ABCA8O94911 1581 aa9.57□□□□□ -0.88
PTPRK-219ENST00000531050 CARMIL2Q6F5E8 1435 aa9.57□□□□□ -0.88
PTPRK-219ENST00000531050 LOC102724159A0A0B4J2E5 919 aa9.57□□□□□ -0.88
PTPRK-219ENST00000531050 APPP05067 770 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 160 ms