RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 FMNL1O95466 1100 aaPredicted RBP15.43■□□□□ 0.06
CCDC90B-217ENST00000530253 GCGRP47871 477 aa15.43■□□□□ 0.06
CCDC90B-217ENST00000530253 SALL2Q9Y467 1007 aaPredicted RBP15.42■□□□□ 0.06
CCDC90B-217ENST00000530253 KIF21AQ7Z4S6 1674 aa15.41■□□□□ 0.06
CCDC90B-217ENST00000530253 PRDM2Q13029 1718 aa15.41■□□□□ 0.06
CCDC90B-217ENST00000530253 GDF9O60383 454 aa15.41■□□□□ 0.06
CCDC90B-217ENST00000530253 RPIAP49247 311 aa15.41■□□□□ 0.06
CCDC90B-217ENST00000530253 PDS5BQ9NTI5 1447 aa15.41■□□□□ 0.06
CCDC90B-217ENST00000530253 PLA2G2CQ5R387 149 aa15.4■□□□□ 0.06
CCDC90B-217ENST00000530253 FAM187AA6NFU0 413 aa15.39■□□□□ 0.05
CCDC90B-217ENST00000530253 TNFRSF10AO00220 468 aa15.39■□□□□ 0.05
CCDC90B-217ENST00000530253 THAP11Q96EK4 314 aa15.39■□□□□ 0.05
CCDC90B-217ENST00000530253 MYT1Q01538 1121 aa15.38■□□□□ 0.05
CCDC90B-217ENST00000530253 CUX2O14529 1486 aa15.38■□□□□ 0.05
CCDC90B-217ENST00000530253 FANCD2Q9BXW9 1451 aa15.38■□□□□ 0.05
CCDC90B-217ENST00000530253 NLRP7Q8WX94 980 aa15.37■□□□□ 0.05
CCDC90B-217ENST00000530253 SLC27A5Q9Y2P5 690 aa15.37■□□□□ 0.05
CCDC90B-217ENST00000530253 PHOX2BQ99453 314 aa15.36■□□□□ 0.05
CCDC90B-217ENST00000530253 FCF1Q9Y324 198 aaKnown RBP15.36■□□□□ 0.05
CCDC90B-217ENST00000530253 CD2BP2O95400 341 aaKnown RBP15.35■□□□□ 0.05
CCDC90B-217ENST00000530253 THOC2Q8NI27 1593 aaKnown RBP15.35■□□□□ 0.05
CCDC90B-217ENST00000530253 CEP164Q9UPV0 1460 aa15.33■□□□□ 0.05
CCDC90B-217ENST00000530253 MAP2K5Q13163 448 aa15.33■□□□□ 0.04
CCDC90B-217ENST00000530253 MSS51Q4VC12 460 aa15.33■□□□□ 0.04
CCDC90B-217ENST00000530253 Q3C1V9 767 aa15.32■□□□□ 0.04
CCDC90B-217ENST00000530253 BRICD5Q6PL45 260 aa15.31■□□□□ 0.04
CCDC90B-217ENST00000530253 FAM160A2Q8N612 972 aaPredicted RBP15.3■□□□□ 0.04
CCDC90B-217ENST00000530253 ZBTB24O43167 697 aaPredicted RBP15.29■□□□□ 0.04
CCDC90B-217ENST00000530253 FOXC1Q12948 553 aa15.29■□□□□ 0.04
CCDC90B-217ENST00000530253 MRC2Q9UBG0 1479 aa15.28■□□□□ 0.04
CCDC90B-217ENST00000530253 PKD2L1Q9P0L9 805 aa15.28■□□□□ 0.04
CCDC90B-217ENST00000530253 KDM2AQ9Y2K7 1162 aa15.28■□□□□ 0.04
CCDC90B-217ENST00000530253 WDR62O43379 1518 aa15.26■□□□□ 0.03
CCDC90B-217ENST00000530253 CD46P15529 392 aa15.25■□□□□ 0.03
CCDC90B-217ENST00000530253 URB2Q14146 1524 aaKnown RBP15.25■□□□□ 0.03
CCDC90B-217ENST00000530253 VSIG10Q8N0Z9 540 aa15.24■□□□□ 0.03
CCDC90B-217ENST00000530253 CYP4X1Q8N118 509 aa15.24■□□□□ 0.03
CCDC90B-217ENST00000530253 PRDM9Q9NQV7 894 aa15.24■□□□□ 0.03
CCDC90B-217ENST00000530253 MINK1Q8N4C8 1332 aaPredicted RBP15.23■□□□□ 0.03
CCDC90B-217ENST00000530253 USP46P62068 366 aa15.23■□□□□ 0.03
CCDC90B-217ENST00000530253 RNF19BQ6ZMZ0 732 aa15.23■□□□□ 0.03
CCDC90B-217ENST00000530253 ZNF775Q96BV0 537 aaPredicted RBP15.23■□□□□ 0.03
CCDC90B-217ENST00000530253 IRF6O14896 467 aa15.22■□□□□ 0.03
CCDC90B-217ENST00000530253 KDM4AO75164 1064 aa15.22■□□□□ 0.03
CCDC90B-217ENST00000530253 CRIPAKQ8N1N5 446 aa15.2■□□□□ 0.02
CCDC90B-217ENST00000530253 AAASQ9NRG9 546 aa15.2■□□□□ 0.02
CCDC90B-217ENST00000530253 TOR4AQ9NXH8 423 aa15.19■□□□□ 0.02
CCDC90B-217ENST00000530253 MMP16P51512 607 aa15.18■□□□□ 0.02
CCDC90B-217ENST00000530253 DNMBPQ6XZF7 1577 aa15.18■□□□□ 0.02
CCDC90B-217ENST00000530253 TOPBP1Q92547 1522 aa15.17■□□□□ 0.02
CCDC90B-217ENST00000530253 USB1Q9BQ65 265 aaKnown RBP15.17■□□□□ 0.02
CCDC90B-217ENST00000530253 AVPP01185 164 aa15.16■□□□□ 0.02
CCDC90B-217ENST00000530253 MDM2Q00987 491 aaPredicted RBP15.16■□□□□ 0.02
CCDC90B-217ENST00000530253 CTC1Q2NKJ3 1217 aa15.16■□□□□ 0.02
CCDC90B-217ENST00000530253 CUX1P39880 1505 aa15.16■□□□□ 0.02
CCDC90B-217ENST00000530253 ST8SIA5O15466 376 aa15.15■□□□□ 0.02
CCDC90B-217ENST00000530253 ABCC8Q09428 1581 aa15.14■□□□□ 0.01
CCDC90B-217ENST00000530253 TTC24A2A3L6 582 aaPredicted RBP15.13■□□□□ 0.01
CCDC90B-217ENST00000530253 CLCN1P35523 988 aa15.13■□□□□ 0.01
CCDC90B-217ENST00000530253 WNT7AO00755 349 aa15.12■□□□□ 0.01
CCDC90B-217ENST00000530253 TRIM32Q13049 653 aa15.12■□□□□ 0.01
CCDC90B-217ENST00000530253 CCDC102AQ96A19 550 aa15.12■□□□□ 0.01
CCDC90B-217ENST00000530253 GPCPD1Q9NPB8 672 aa15.12■□□□□ 0.01
CCDC90B-217ENST00000530253 AXIN1O15169 862 aa15.11■□□□□ 0.01
CCDC90B-217ENST00000530253 DXOO77932 396 aaKnown RBP15.11■□□□□ 0.01
CCDC90B-217ENST00000530253 POTECB2RU33 542 aa15.1■□□□□ 0.01
CCDC90B-217ENST00000530253 HOXA2O43364 376 aa15.1■□□□□ 0.01
CCDC90B-217ENST00000530253 KRI1Q8N9T8 703 aaKnown RBP15.1■□□□□ 0.01
CCDC90B-217ENST00000530253 REPIN1Q9BWE0 567 aaKnown RBP15.1■□□□□ 0.01
CCDC90B-217ENST00000530253 SYNJ1O43426 1573 aa15.1■□□□□ 0.01
CCDC90B-217ENST00000530253 WRNQ14191 1432 aaPredicted RBP eCLIP15.09■□□□□ 0.01
CCDC90B-217ENST00000530253 BIVM-ERCC5R4GMW8 1640 aa15.08■□□□□ 0
CCDC90B-217ENST00000530253 SMCPP49901 116 aaPredicted RBP15.08■□□□□ 0
CCDC90B-217ENST00000530253 SNIP1Q8TAD8 396 aaKnown RBP15.08■□□□□ 0
CCDC90B-217ENST00000530253 POLA1P09884 1462 aaPredicted RBP15.07■□□□□ 0
CCDC90B-217ENST00000530253 TOP2BQ02880 1626 aa15.06■□□□□ 0
CCDC90B-217ENST00000530253 FGD5Q6ZNL6 1462 aa15.05■□□□□ -0
CCDC90B-217ENST00000530253 NUTM1Q86Y26 1132 aa15.04■□□□□ -0
CCDC90B-217ENST00000530253 FAM217BQ9NTX9 383 aaPredicted RBP15.04■□□□□ -0
CCDC90B-217ENST00000530253 CCDC24Q8N4L8 307 aa15.02■□□□□ -0
CCDC90B-217ENST00000530253 TARBP1Q13395 1621 aaKnown RBP15.02□□□□□ -0.01
CCDC90B-217ENST00000530253 IFT140Q96RY7 1462 aa15.01□□□□□ -0.01
CCDC90B-217ENST00000530253 WNT7BP56706 349 aa15.01□□□□□ -0.01
CCDC90B-217ENST00000530253 JUNDP17535 347 aa15□□□□□ -0.01
CCDC90B-217ENST00000530253 HLA-CQ95604 372 aa15□□□□□ -0.01
CCDC90B-217ENST00000530253 MRGPRX2Q96LB1 330 aa15□□□□□ -0.01
CCDC90B-217ENST00000530253 RAD54L2Q9Y4B4 1467 aa14.98□□□□□ -0.01
CCDC90B-217ENST00000530253 RETREG3Q86VR2 466 aa14.98□□□□□ -0.01
CCDC90B-217ENST00000530253 C11orf95C9JLR9 678 aaPredicted RBP14.97□□□□□ -0.01
CCDC90B-217ENST00000530253 SMPD1P17405 629 aa14.97□□□□□ -0.01
CCDC90B-217ENST00000530253 WDR97A6NE52 1622 aa14.96□□□□□ -0.01
CCDC90B-217ENST00000530253 TREML4Q6UXN2 200 aa14.96□□□□□ -0.01
CCDC90B-217ENST00000530253 GMPR2Q9P2T1 348 aaKnown RBP14.96□□□□□ -0.01
CCDC90B-217ENST00000530253 DACH1Q9UI36 760 aa14.96□□□□□ -0.01
CCDC90B-217ENST00000530253 SOGA1O94964 1423 aa14.95□□□□□ -0.02
CCDC90B-217ENST00000530253 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.95□□□□□ -0.02
CCDC90B-217ENST00000530253 ZNF608Q9ULD9 1512 aaPredicted RBP14.95□□□□□ -0.02
CCDC90B-217ENST00000530253 GUCA2AQ02747 115 aa14.94□□□□□ -0.02
CCDC90B-217ENST00000530253 RC3H1Q5TC82 1133 aaKnown RBP14.93□□□□□ -0.02
CCDC90B-217ENST00000530253 ABCA10Q8WWZ4 1543 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms