RNA–Protein interactions for RNA: ENST00000528439.5

RPS3-210, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-210ENST00000528439 PTCH1Q13635 1447 aa13.94□□□□□ -0.18
RPS3-210ENST00000528439 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.93□□□□□ -0.18
RPS3-210ENST00000528439 WAPLQ7Z5K2 1190 aa13.93□□□□□ -0.18
RPS3-210ENST00000528439 STRCQ7RTU9 1775 aa13.93□□□□□ -0.18
RPS3-210ENST00000528439 ADGRB2O60241 1585 aa13.92□□□□□ -0.18
RPS3-210ENST00000528439 CHD2O14647 1828 aaKnown RBP13.92□□□□□ -0.18
RPS3-210ENST00000528439 NWD1Q149M9 1564 aa13.92□□□□□ -0.18
RPS3-210ENST00000528439 MINK1Q8N4C8 1332 aaPredicted RBP13.91□□□□□ -0.18
RPS3-210ENST00000528439 PIK3R4Q99570 1358 aa13.91□□□□□ -0.18
RPS3-210ENST00000528439 POGKQ9P215 609 aa13.9□□□□□ -0.18
RPS3-210ENST00000528439 SIRT1Q96EB6 747 aa13.89□□□□□ -0.19
RPS3-210ENST00000528439 CDCA8Q53HL2 280 aa13.88□□□□□ -0.19
RPS3-210ENST00000528439 AMOTL2Q9Y2J4 779 aa13.88□□□□□ -0.19
RPS3-210ENST00000528439 EVC2Q86UK5 1308 aa13.88□□□□□ -0.19
RPS3-210ENST00000528439 SLC24A1O60721 1099 aa13.87□□□□□ -0.19
RPS3-210ENST00000528439 KCNA6P17658 529 aa13.87□□□□□ -0.19
RPS3-210ENST00000528439 NALCNQ8IZF0 1738 aa13.87□□□□□ -0.19
RPS3-210ENST00000528439 CABP2Q9NPB3 220 aa13.86□□□□□ -0.19
RPS3-210ENST00000528439 DMRT2Q9Y5R5 561 aa13.86□□□□□ -0.19
RPS3-210ENST00000528439 STRCP1A6NGW2 1772 aa13.86□□□□□ -0.19
RPS3-210ENST00000528439 PANK3Q9H999 370 aa13.85□□□□□ -0.19
RPS3-210ENST00000528439 TOPAZ1Q8N9V7 1692 aa13.85□□□□□ -0.19
RPS3-210ENST00000528439 PER1O15534 1290 aaPredicted RBP13.84□□□□□ -0.19
RPS3-210ENST00000528439 PUS7Q96PZ0 661 aaKnown RBP13.84□□□□□ -0.19
RPS3-210ENST00000528439 ATP7BP35670 1465 aa13.84□□□□□ -0.19
RPS3-210ENST00000528439 CD163L1Q9NR16 1453 aa13.84□□□□□ -0.19
RPS3-210ENST00000528439 USP32Q8NFA0 1604 aa13.83□□□□□ -0.2
RPS3-210ENST00000528439 ANP32CO43423 234 aa13.83□□□□□ -0.2
RPS3-210ENST00000528439 CDK19Q9BWU1 502 aa13.83□□□□□ -0.2
RPS3-210ENST00000528439 ATAD2Q6PL18 1390 aa13.83□□□□□ -0.2
RPS3-210ENST00000528439 SRPK2P78362 688 aaKnown RBP13.82□□□□□ -0.2
RPS3-210ENST00000528439 NKTRP30414 1462 aaKnown RBP13.81□□□□□ -0.2
RPS3-210ENST00000528439 CDC42BPGQ6DT37 1551 aa13.81□□□□□ -0.2
RPS3-210ENST00000528439 WASLO00401 505 aaPredicted RBP13.81□□□□□ -0.2
RPS3-210ENST00000528439 SLC12A5Q9H2X9 1139 aa13.81□□□□□ -0.2
RPS3-210ENST00000528439 PRKRIP1Q9H875 184 aaPredicted RBP13.81□□□□□ -0.2
RPS3-210ENST00000528439 PRR36Q9H6K5 1346 aa13.81□□□□□ -0.2
RPS3-210ENST00000528439 FMN2Q9NZ56 1722 aa13.81□□□□□ -0.2
RPS3-210ENST00000528439 CARD14Q9BXL6 1004 aa13.8□□□□□ -0.2
RPS3-210ENST00000528439 ANKRD36BQ8N2N9 1353 aa13.8□□□□□ -0.2
RPS3-210ENST00000528439 NINLQ9Y2I6 1382 aa13.8□□□□□ -0.2
RPS3-210ENST00000528439 ADRA2BP18089 450 aa13.79□□□□□ -0.2
RPS3-210ENST00000528439 TMC1Q8TDI8 760 aa13.79□□□□□ -0.2
RPS3-210ENST00000528439 A0A1W2PP64 1363 aa13.79□□□□□ -0.2
RPS3-210ENST00000528439 NSD3Q9BZ95 1437 aa13.79□□□□□ -0.2
RPS3-210ENST00000528439 CNGB1Q14028 1251 aaPredicted RBP13.78□□□□□ -0.2
RPS3-210ENST00000528439 AMER1Q5JTC6 1135 aaPredicted RBP13.78□□□□□ -0.2
RPS3-210ENST00000528439 RBM33Q96EV2 1170 aaKnown RBP13.78□□□□□ -0.2
RPS3-210ENST00000528439 PARD3Q8TEW0 1356 aa13.78□□□□□ -0.2
RPS3-210ENST00000528439 ADGRL3Q9HAR2 1447 aa13.78□□□□□ -0.2
RPS3-210ENST00000528439 PPIP5K1Q6PFW1 1433 aa13.77□□□□□ -0.21
RPS3-210ENST00000528439 AKAP12Q02952 1782 aa13.76□□□□□ -0.21
RPS3-210ENST00000528439 MON2Q7Z3U7 1717 aa13.76□□□□□ -0.21
RPS3-210ENST00000528439 KTN1Q86UP2 1357 aaKnown RBP13.76□□□□□ -0.21
RPS3-210ENST00000528439 RGPD8O14715 1765 aaPredicted RBP13.76□□□□□ -0.21
RPS3-210ENST00000528439 ITSN1Q15811 1721 aa13.76□□□□□ -0.21
RPS3-210ENST00000528439 CCDC184Q52MB2 194 aa13.75□□□□□ -0.21
RPS3-210ENST00000528439 CABP1Q9NZU7 370 aa13.75□□□□□ -0.21
RPS3-210ENST00000528439 XIRP1Q702N8 1843 aaKnown RBP13.75□□□□□ -0.21
RPS3-210ENST00000528439 NRKQ7Z2Y5 1582 aa13.75□□□□□ -0.21
RPS3-210ENST00000528439 CPSF1Q10570 1443 aaKnown RBP13.74□□□□□ -0.21
RPS3-210ENST00000528439 NPC1L1Q9UHC9 1359 aa13.74□□□□□ -0.21
RPS3-210ENST00000528439 CCER2I3L3R5 266 aa13.74□□□□□ -0.21
RPS3-210ENST00000528439 CC2D1BQ5T0F9 858 aaKnown RBP13.74□□□□□ -0.21
RPS3-210ENST00000528439 NUDT16Q96DE0 195 aaKnown RBP13.74□□□□□ -0.21
RPS3-210ENST00000528439 ANKARQ7Z5J8 1434 aa13.73□□□□□ -0.21
RPS3-210ENST00000528439 ZNF335Q9H4Z2 1342 aaPredicted RBP13.73□□□□□ -0.21
RPS3-210ENST00000528439 NUTM2FA1L443 756 aa13.73□□□□□ -0.21
RPS3-210ENST00000528439 KNSTRNQ9Y448 316 aa13.73□□□□□ -0.21
RPS3-210ENST00000528439 KIF20BQ96Q89 1820 aa13.72□□□□□ -0.21
RPS3-210ENST00000528439 ANKRD26Q9UPS8 1709 aa13.71□□□□□ -0.21
RPS3-210ENST00000528439 CCDC61Q9Y6R9 512 aa13.71□□□□□ -0.21
RPS3-210ENST00000528439 TMEM94Q12767 1356 aa13.71□□□□□ -0.22
RPS3-210ENST00000528439 CACNB1Q02641 598 aaPredicted RBP13.7□□□□□ -0.22
RPS3-210ENST00000528439 RALBP1Q15311 655 aa13.7□□□□□ -0.22
RPS3-210ENST00000528439 LRRC7Q96NW7 1537 aa13.69□□□□□ -0.22
RPS3-210ENST00000528439 MYBBP1AQ9BQG0 1328 aaKnown RBP13.69□□□□□ -0.22
RPS3-210ENST00000528439 LTBP4Q8N2S1 1624 aa13.69□□□□□ -0.22
RPS3-210ENST00000528439 PROSER2Q86WR7 435 aaPredicted RBP13.69□□□□□ -0.22
RPS3-210ENST00000528439 TERF2IPQ9NYB0 399 aa13.69□□□□□ -0.22
RPS3-210ENST00000528439 EDC4Q6P2E9 1401 aaKnown RBP13.68□□□□□ -0.22
RPS3-210ENST00000528439 PLEKHG3A1L390 1219 aa13.67□□□□□ -0.22
RPS3-210ENST00000528439 HDGFL2Q7Z4V5 671 aaPredicted RBP13.67□□□□□ -0.22
RPS3-210ENST00000528439 POLR3AO14802 1390 aaPredicted RBP13.67□□□□□ -0.22
RPS3-210ENST00000528439 NSD2O96028 1365 aa13.67□□□□□ -0.22
RPS3-210ENST00000528439 CGNL1Q0VF96 1302 aa13.66□□□□□ -0.22
RPS3-210ENST00000528439 USP6P35125 1406 aa13.66□□□□□ -0.22
RPS3-210ENST00000528439 DCCP43146 1447 aa13.66□□□□□ -0.22
RPS3-210ENST00000528439 NCOA3Q9Y6Q9 1424 aa13.66□□□□□ -0.22
RPS3-210ENST00000528439 SSH2Q76I76 1423 aa13.65□□□□□ -0.22
RPS3-210ENST00000528439 C14orf37Q86TY3 774 aa13.65□□□□□ -0.22
RPS3-210ENST00000528439 MRS2Q9HD23 443 aa13.65□□□□□ -0.22
RPS3-210ENST00000528439 BRD4O60885 1362 aaPredicted RBP13.65□□□□□ -0.22
RPS3-210ENST00000528439 ACEP12821 1306 aa13.64□□□□□ -0.23
RPS3-210ENST00000528439 MST1RQ04912 1400 aa13.64□□□□□ -0.23
RPS3-210ENST00000528439 PPP2R1AP30153 589 aa13.64□□□□□ -0.23
RPS3-210ENST00000528439 PMFBP1Q8TBY8 1022 aa13.64□□□□□ -0.23
RPS3-210ENST00000528439 YTHDC1Q96MU7 727 aaKnown RBP13.64□□□□□ -0.23
RPS3-210ENST00000528439 C1orf167Q5SNV9 1468 aa13.63□□□□□ -0.23
RPS3-210ENST00000528439 FYB1O15117 783 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms