RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 ANKRD30BQ9BXX2 1392 aa23.08■■□□□ 1.29
CLNS1A-210ENST00000528364 ESCO1Q5FWF5 840 aa23.07■■□□□ 1.28
CLNS1A-210ENST00000528364 PLEKHH1Q9ULM0 1364 aa23.06■■□□□ 1.28
CLNS1A-210ENST00000528364 LRPPRCP42704 1394 aaKnown RBP23.05■■□□□ 1.28
CLNS1A-210ENST00000528364 QTRT2Q9H974 415 aaKnown RBP23.05■■□□□ 1.28
CLNS1A-210ENST00000528364 XPCQ01831 940 aaPredicted RBP23.04■■□□□ 1.28
CLNS1A-210ENST00000528364 NGLY1Q96IV0 654 aa23.03■■□□□ 1.28
CLNS1A-210ENST00000528364 ABCC11Q96J66 1382 aa23.02■■□□□ 1.28
CLNS1A-210ENST00000528364 IFT172Q9UG01 1749 aa23.02■■□□□ 1.28
CLNS1A-210ENST00000528364 FOXO3O43524 673 aa23.02■■□□□ 1.28
CLNS1A-210ENST00000528364 UPF1Q92900 1129 aaKnown RBP eCLIP23.02■■□□□ 1.28
CLNS1A-210ENST00000528364 LAMC1P11047 1609 aa23.01■■□□□ 1.27
CLNS1A-210ENST00000528364 PIK3C2GO75747 1445 aa23.01■■□□□ 1.27
CLNS1A-210ENST00000528364 CFAP70Q5T0N1 1121 aa23.01■■□□□ 1.27
CLNS1A-210ENST00000528364 C14orf93Q9H972 538 aaKnown RBP23.01■■□□□ 1.27
CLNS1A-210ENST00000528364 RAB3GAP2Q9H2M9 1393 aa23.01■■□□□ 1.27
CLNS1A-210ENST00000528364 TECPR2O15040 1411 aa22.99■■□□□ 1.27
CLNS1A-210ENST00000528364 YTHDC2Q9H6S0 1430 aaKnown RBP22.99■■□□□ 1.27
CLNS1A-210ENST00000528364 NPHP3Q7Z494 1330 aa22.97■■□□□ 1.27
CLNS1A-210ENST00000528364 CDC42BPGQ6DT37 1551 aa22.97■■□□□ 1.27
CLNS1A-210ENST00000528364 RBM6P78332 1123 aaKnown RBP22.96■■□□□ 1.27
CLNS1A-210ENST00000528364 ACIN1Q9UKV3 1341 aaKnown RBP22.96■■□□□ 1.27
CLNS1A-210ENST00000528364 SAFB2Q14151 953 aaKnown RBP eCLIP22.94■■□□□ 1.26
CLNS1A-210ENST00000528364 PXDNQ92626 1479 aa22.93■■□□□ 1.26
CLNS1A-210ENST00000528364 SIRT1Q96EB6 747 aa22.93■■□□□ 1.26
CLNS1A-210ENST00000528364 USP21Q9UK80 565 aa22.93■■□□□ 1.26
CLNS1A-210ENST00000528364 CDK12Q9NYV4 1490 aaPredicted RBP22.92■■□□□ 1.26
CLNS1A-210ENST00000528364 DHX57Q6P158 1386 aaKnown RBP22.91■■□□□ 1.26
CLNS1A-210ENST00000528364 NRXN1Q9ULB1 1477 aa22.91■■□□□ 1.26
CLNS1A-210ENST00000528364 FNBP4Q8N3X1 1017 aaPredicted RBP22.9■■□□□ 1.26
CLNS1A-210ENST00000528364 PRAM1Q96QH2 718 aa22.9■■□□□ 1.26
CLNS1A-210ENST00000528364 KDM2AQ9Y2K7 1162 aa22.9■■□□□ 1.26
CLNS1A-210ENST00000528364 KNDC1Q76NI1 1749 aa22.9■■□□□ 1.26
CLNS1A-210ENST00000528364 RGS12O14924 1447 aa22.9■■□□□ 1.26
CLNS1A-210ENST00000528364 KRT28Q7Z3Y7 464 aa22.88■■□□□ 1.25
CLNS1A-210ENST00000528364 MYOM2P54296 1465 aa22.87■■□□□ 1.25
CLNS1A-210ENST00000528364 COL22A1Q8NFW1 1626 aaPredicted RBP22.87■■□□□ 1.25
CLNS1A-210ENST00000528364 TRPC5Q9UL62 973 aaPredicted RBP22.87■■□□□ 1.25
CLNS1A-210ENST00000528364 FMN2Q9NZ56 1722 aa22.86■■□□□ 1.25
CLNS1A-210ENST00000528364 SPATA31A3Q5VYP0 1347 aa22.85■■□□□ 1.25
CLNS1A-210ENST00000528364 DCAF11Q8TEB1 546 aa22.85■■□□□ 1.25
CLNS1A-210ENST00000528364 POGKQ9P215 609 aa22.85■■□□□ 1.25
CLNS1A-210ENST00000528364 PHF8Q9UPP1 1060 aa22.85■■□□□ 1.25
CLNS1A-210ENST00000528364 PLEKHG5O94827 1062 aa22.84■■□□□ 1.25
CLNS1A-210ENST00000528364 TRAK1Q9UPV9 953 aa22.84■■□□□ 1.25
CLNS1A-210ENST00000528364 RGPD8O14715 1765 aaPredicted RBP22.84■■□□□ 1.25
CLNS1A-210ENST00000528364 ATRNO75882 1429 aa22.82■■□□□ 1.24
CLNS1A-210ENST00000528364 BCL9LQ86UU0 1499 aa22.81■■□□□ 1.24
CLNS1A-210ENST00000528364 HIRIP3Q9BW71 556 aaPredicted RBP22.81■■□□□ 1.24
CLNS1A-210ENST00000528364 PMFBP1Q8TBY8 1022 aa22.8■■□□□ 1.24
CLNS1A-210ENST00000528364 CABLES1Q8TDN4 633 aa22.8■■□□□ 1.24
CLNS1A-210ENST00000528364 HRCP23327 699 aa22.78■■□□□ 1.24
CLNS1A-210ENST00000528364 MINK1Q8N4C8 1332 aaPredicted RBP22.78■■□□□ 1.24
CLNS1A-210ENST00000528364 ADGRB1O14514 1584 aa22.77■■□□□ 1.24
CLNS1A-210ENST00000528364 PSME1Q06323 249 aa22.77■■□□□ 1.24
CLNS1A-210ENST00000528364 LMOD2Q6P5Q4 547 aa22.77■■□□□ 1.24
CLNS1A-210ENST00000528364 KIF1AQ12756 1690 aa22.76■■□□□ 1.23
CLNS1A-210ENST00000528364 MARF1Q9Y4F3 1742 aaKnown RBP22.75■■□□□ 1.23
CLNS1A-210ENST00000528364 GJD4Q96KN9 370 aaPredicted RBP22.75■■□□□ 1.23
CLNS1A-210ENST00000528364 DLC1Q96QB1 1528 aa22.75■■□□□ 1.23
CLNS1A-210ENST00000528364 UNC5CLQ8IV45 518 aa22.73■■□□□ 1.23
CLNS1A-210ENST00000528364 PRR36Q9H6K5 1346 aa22.73■■□□□ 1.23
CLNS1A-210ENST00000528364 HAP1P54257 671 aaPredicted RBP22.72■■□□□ 1.23
CLNS1A-210ENST00000528364 TNS3Q68CZ2 1445 aa22.72■■□□□ 1.23
CLNS1A-210ENST00000528364 ATAD2Q6PL18 1390 aa22.71■■□□□ 1.23
CLNS1A-210ENST00000528364 USP32Q8NFA0 1604 aa22.71■■□□□ 1.23
CLNS1A-210ENST00000528364 SBNO1A3KN83 1393 aa22.7■■□□□ 1.22
CLNS1A-210ENST00000528364 SLIT2O94813 1529 aa22.7■■□□□ 1.22
CLNS1A-210ENST00000528364 WASLO00401 505 aaPredicted RBP22.69■■□□□ 1.22
CLNS1A-210ENST00000528364 ANKARQ7Z5J8 1434 aa22.68■■□□□ 1.22
CLNS1A-210ENST00000528364 STAC3Q96MF2 364 aa22.68■■□□□ 1.22
CLNS1A-210ENST00000528364 FAM83GA6ND36 823 aa22.67■■□□□ 1.22
CLNS1A-210ENST00000528364 RALGAPBQ86X10 1494 aa22.66■■□□□ 1.22
CLNS1A-210ENST00000528364 ADGRB2O60241 1585 aa22.65■■□□□ 1.22
CLNS1A-210ENST00000528364 ARHGEF10O15013 1369 aa22.64■■□□□ 1.22
CLNS1A-210ENST00000528364 GLI3P10071 1580 aa22.63■■□□□ 1.21
CLNS1A-210ENST00000528364 VPS72Q15906 364 aa22.62■■□□□ 1.21
CLNS1A-210ENST00000528364 NGDNQ8NEJ9 315 aaKnown RBP22.62■■□□□ 1.21
CLNS1A-210ENST00000528364 GPRASP1Q5JY77 1395 aa22.62■■□□□ 1.21
CLNS1A-210ENST00000528364 NBPF1Q3BBV0 1214 aa22.61■■□□□ 1.21
CLNS1A-210ENST00000528364 NUDT16Q96DE0 195 aaKnown RBP22.61■■□□□ 1.21
CLNS1A-210ENST00000528364 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.61■■□□□ 1.21
CLNS1A-210ENST00000528364 CCDC9Q9Y3X0 531 aaKnown RBP22.61■■□□□ 1.21
CLNS1A-210ENST00000528364 PAK3O75914 559 aaPredicted RBP22.6■■□□□ 1.21
CLNS1A-210ENST00000528364 SEPT12Q8IYM1 358 aa22.6■■□□□ 1.21
CLNS1A-210ENST00000528364 TULP4Q9NRJ4 1543 aa22.6■■□□□ 1.21
CLNS1A-210ENST00000528364 CDK19Q9BWU1 502 aa22.59■■□□□ 1.21
CLNS1A-210ENST00000528364 TRPM3Q9HCF6 1732 aaPredicted RBP22.59■■□□□ 1.21
CLNS1A-210ENST00000528364 EIF3AQ14152 1382 aaKnown RBP22.58■■□□□ 1.21
CLNS1A-210ENST00000528364 ABCA3Q99758 1704 aa22.57■■□□□ 1.2
CLNS1A-210ENST00000528364 BTG4Q9NY30 223 aa22.56■■□□□ 1.2
CLNS1A-210ENST00000528364 ARHGEF28Q8N1W1 1705 aaKnown RBP22.56■■□□□ 1.2
CLNS1A-210ENST00000528364 ONECUT3O60422 494 aaPredicted RBP22.55■■□□□ 1.2
CLNS1A-210ENST00000528364 CCDC125Q86Z20 511 aa22.55■■□□□ 1.2
CLNS1A-210ENST00000528364 PLCH1Q4KWH8 1693 aa22.55■■□□□ 1.2
CLNS1A-210ENST00000528364 BRWD3Q6RI45 1802 aa22.54■■□□□ 1.2
CLNS1A-210ENST00000528364 ALS2Q96Q42 1657 aa22.54■■□□□ 1.2
CLNS1A-210ENST00000528364 NUTM2GQ5VZR2 741 aa22.53■■□□□ 1.2
CLNS1A-210ENST00000528364 ATP7BP35670 1465 aa22.52■■□□□ 1.2
CLNS1A-210ENST00000528364 NWD2Q9ULI1 1742 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms