RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 NOC3LQ8WTT2 800 aaKnown RBP8.84□□□□□ -0.99
CTNND1-218ENST00000528232 GGNBP2Q9H3C7 697 aa8.84□□□□□ -0.99
CTNND1-218ENST00000528232 UGGT2Q9NYU1 1516 aa8.84□□□□□ -0.99
CTNND1-218ENST00000528232 TEFQ10587 303 aa8.84□□□□□ -0.99
CTNND1-218ENST00000528232 PNISRQ8TF01 805 aaKnown RBP8.84□□□□□ -0.99
CTNND1-218ENST00000528232 HSP90B1P14625 803 aaKnown RBP8.83□□□□□ -1
CTNND1-218ENST00000528232 MTHFSP49914 203 aa8.83□□□□□ -1
CTNND1-218ENST00000528232 FAM135AQ9P2D6 1515 aa8.83□□□□□ -1
CTNND1-218ENST00000528232 RPRD2Q5VT52 1461 aaKnown RBP8.82□□□□□ -1
CTNND1-218ENST00000528232 ARID3AQ99856 593 aa8.82□□□□□ -1
CTNND1-218ENST00000528232 FOXD4L1Q9NU39 408 aa8.82□□□□□ -1
CTNND1-218ENST00000528232 SLC52A1Q9NWF4 448 aa8.82□□□□□ -1
CTNND1-218ENST00000528232 REC8O95072 547 aa8.82□□□□□ -1
CTNND1-218ENST00000528232 TCP11L2Q8N4U5 519 aa8.82□□□□□ -1
CTNND1-218ENST00000528232 TPM4P67936 248 aa8.82□□□□□ -1
CTNND1-218ENST00000528232 RILPL2Q969X0 211 aa8.82□□□□□ -1
CTNND1-218ENST00000528232 NCOA1Q15788 1441 aa8.82□□□□□ -1
CTNND1-218ENST00000528232 CDCA7LQ96GN5 454 aa8.81□□□□□ -1
CTNND1-218ENST00000528232 PANK1Q8TE04 598 aa8.81□□□□□ -1
CTNND1-218ENST00000528232 ISY1Q9ULR0 285 aaKnown RBP8.81□□□□□ -1
CTNND1-218ENST00000528232 CLSTN1O94985 981 aa8.81□□□□□ -1
CTNND1-218ENST00000528232 HMOX1P09601 288 aa8.81□□□□□ -1
CTNND1-218ENST00000528232 KIF3AQ9Y496 699 aa8.81□□□□□ -1
CTNND1-218ENST00000528232 PSME1Q06323 249 aa8.81□□□□□ -1
CTNND1-218ENST00000528232 CHMP4CQ96CF2 233 aa8.81□□□□□ -1
CTNND1-218ENST00000528232 KIF21AQ7Z4S6 1674 aa8.81□□□□□ -1
CTNND1-218ENST00000528232 NEXNQ0ZGT2 675 aa8.8□□□□□ -1
CTNND1-218ENST00000528232 PDE3AQ14432 1141 aa8.8□□□□□ -1
CTNND1-218ENST00000528232 TSPYL4Q9UJ04 414 aa8.8□□□□□ -1
CTNND1-218ENST00000528232 SLC4A3P48751 1232 aa8.8□□□□□ -1
CTNND1-218ENST00000528232 NOL8Q76FK4 1167 aaKnown RBP8.8□□□□□ -1
CTNND1-218ENST00000528232 RUFY2Q8WXA3 655 aa8.8□□□□□ -1
CTNND1-218ENST00000528232 PRAM1Q96QH2 718 aa8.8□□□□□ -1
CTNND1-218ENST00000528232 CT47B1P0C2W7 299 aaPredicted RBP8.8□□□□□ -1
CTNND1-218ENST00000528232 TTC5Q8N0Z6 440 aa8.8□□□□□ -1
CTNND1-218ENST00000528232 ZNF608Q9ULD9 1512 aaPredicted RBP8.8□□□□□ -1
CTNND1-218ENST00000528232 WDR63Q8IWG1 891 aa8.79□□□□□ -1
CTNND1-218ENST00000528232 MAPKBP1O60336 1514 aa8.79□□□□□ -1
CTNND1-218ENST00000528232 ATAD2Q6PL18 1390 aa8.79□□□□□ -1
CTNND1-218ENST00000528232 DDX58O95786 925 aaKnown RBP8.79□□□□□ -1
CTNND1-218ENST00000528232 INTS3Q68E01 1043 aaKnown RBP8.79□□□□□ -1
CTNND1-218ENST00000528232 DIAPH3Q9NSV4 1193 aa8.79□□□□□ -1
CTNND1-218ENST00000528232 ADGRL1O94910 1474 aa8.79□□□□□ -1
CTNND1-218ENST00000528232 C9orf78Q9NZ63 289 aaPredicted RBP8.79□□□□□ -1
CTNND1-218ENST00000528232 ATP6V1DQ9Y5K8 247 aa8.79□□□□□ -1
CTNND1-218ENST00000528232 EIF2S2P20042 333 aaKnown RBP8.78□□□□□ -1
CTNND1-218ENST00000528232 ADAMTS12P58397 1594 aa8.78□□□□□ -1
CTNND1-218ENST00000528232 FKBP5Q13451 457 aaPredicted RBP8.78□□□□□ -1
CTNND1-218ENST00000528232 CHMP5Q9NZZ3 219 aa8.78□□□□□ -1
CTNND1-218ENST00000528232 HSP90AB4PQ58FF6 505 aa8.78□□□□□ -1
CTNND1-218ENST00000528232 CDK19Q9BWU1 502 aa8.78□□□□□ -1
CTNND1-218ENST00000528232 CCDC34Q96HJ3 373 aa8.78□□□□□ -1
CTNND1-218ENST00000528232 TCOF1Q13428 1488 aaKnown RBP8.77□□□□□ -1
CTNND1-218ENST00000528232 HMGN5P82970 282 aaKnown RBP8.77□□□□□ -1.01
CTNND1-218ENST00000528232 LRRFIP1Q32MZ4 808 aaKnown RBP8.77□□□□□ -1.01
CTNND1-218ENST00000528232 GAS2L2Q8NHY3 880 aa8.77□□□□□ -1.01
CTNND1-218ENST00000528232 SLC12A5Q9H2X9 1139 aa8.77□□□□□ -1.01
CTNND1-218ENST00000528232 GPATCH8Q9UKJ3 1502 aaKnown RBP8.77□□□□□ -1.01
CTNND1-218ENST00000528232 ZNF692Q9BU19 519 aaPredicted RBP8.77□□□□□ -1.01
CTNND1-218ENST00000528232 RTEL1-TNFRSF6BF6WH68 1400 aa8.77□□□□□ -1.01
CTNND1-218ENST00000528232 KIAA0556O60303 1618 aa8.77□□□□□ -1.01
CTNND1-218ENST00000528232 CDC45O75419 566 aa8.77□□□□□ -1.01
CTNND1-218ENST00000528232 HMGB1P09429 215 aaKnown RBP8.77□□□□□ -1.01
CTNND1-218ENST00000528232 PRKAR2BP31323 418 aa8.77□□□□□ -1.01
CTNND1-218ENST00000528232 CCDC184Q52MB2 194 aa8.77□□□□□ -1.01
CTNND1-218ENST00000528232 C22orf23Q9BZE7 217 aa8.77□□□□□ -1.01
CTNND1-218ENST00000528232 CCDC9Q9Y3X0 531 aaKnown RBP8.77□□□□□ -1.01
CTNND1-218ENST00000528232 NSD3Q9BZ95 1437 aa8.76□□□□□ -1.01
CTNND1-218ENST00000528232 IFIT2P09913 472 aaKnown RBP8.76□□□□□ -1.01
CTNND1-218ENST00000528232 FAM13BQ9NYF5 915 aa8.76□□□□□ -1.01
CTNND1-218ENST00000528232 EXOSC9Q06265 439 aaKnown RBP8.76□□□□□ -1.01
CTNND1-218ENST00000528232 DDX49Q9Y6V7 483 aaKnown RBP8.76□□□□□ -1.01
CTNND1-218ENST00000528232 MRE11P49959 708 aa8.76□□□□□ -1.01
CTNND1-218ENST00000528232 LNPKQ9C0E8 428 aa8.76□□□□□ -1.01
CTNND1-218ENST00000528232 USP8P40818 1118 aa8.75□□□□□ -1.01
CTNND1-218ENST00000528232 CD109Q6YHK3 1445 aa8.75□□□□□ -1.01
CTNND1-218ENST00000528232 EVA1CP58658 441 aa8.75□□□□□ -1.01
CTNND1-218ENST00000528232 GPRASP1Q5JY77 1395 aa8.75□□□□□ -1.01
CTNND1-218ENST00000528232 WDR62O43379 1518 aa8.75□□□□□ -1.01
CTNND1-218ENST00000528232 TPM3P06753 285 aa8.75□□□□□ -1.01
CTNND1-218ENST00000528232 ZKSCAN1P17029 563 aaPredicted RBP8.75□□□□□ -1.01
CTNND1-218ENST00000528232 NECTIN2Q92692 538 aa8.75□□□□□ -1.01
CTNND1-218ENST00000528232 SCAF11Q99590 1463 aaKnown RBP8.75□□□□□ -1.01
CTNND1-218ENST00000528232 H3BQV1 296 aa8.75□□□□□ -1.01
CTNND1-218ENST00000528232 ERC2O15083 957 aa8.75□□□□□ -1.01
CTNND1-218ENST00000528232 G3BP1Q13283 466 aaKnown RBP eCLIP8.75□□□□□ -1.018e-9■□□□□ 11.1
CTNND1-218ENST00000528232 IFFO2Q5TF58 517 aa8.75□□□□□ -1.01
CTNND1-218ENST00000528232 CCDC30Q5VVM6 783 aa8.75□□□□□ -1.01
CTNND1-218ENST00000528232 GCC1Q96CN9 775 aa8.75□□□□□ -1.01
CTNND1-218ENST00000528232 ARGLU1Q9NWB6 273 aaPredicted RBP8.75□□□□□ -1.01
CTNND1-218ENST00000528232 NLRP6P59044 892 aa8.74□□□□□ -1.01
CTNND1-218ENST00000528232 TXNDC2Q86VQ3 553 aa8.74□□□□□ -1.01
CTNND1-218ENST00000528232 TMX4Q9H1E5 349 aaPredicted RBP8.74□□□□□ -1.01
CTNND1-218ENST00000528232 ACBD3Q9H3P7 528 aa8.74□□□□□ -1.01
CTNND1-218ENST00000528232 FOXD4L5Q5VV16 416 aaPredicted RBP8.74□□□□□ -1.01
CTNND1-218ENST00000528232 FOXD4L4Q8WXT5 416 aaPredicted RBP8.74□□□□□ -1.01
CTNND1-218ENST00000528232 DUOX2Q9NRD8 1548 aa8.74□□□□□ -1.01
CTNND1-218ENST00000528232 TWISTNBQ3B726 338 aaPredicted RBP8.74□□□□□ -1.01
CTNND1-218ENST00000528232 CABP1Q9NZU7 370 aa8.74□□□□□ -1.01
CTNND1-218ENST00000528232 NUP153P49790 1475 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms