RNA–Protein interactions for RNA: ENST00000527649.1

SORL1-205, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 1,765 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-205ENST00000527649 SIRT1Q96EB6 747 aa18.84■□□□□ 0.61
SORL1-205ENST00000527649 TULP4Q9NRJ4 1543 aa18.84■□□□□ 0.61
SORL1-205ENST00000527649 PTCH1Q13635 1447 aa18.84■□□□□ 0.61
SORL1-205ENST00000527649 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.8■□□□□ 0.6
SORL1-205ENST00000527649 SLC24A1O60721 1099 aa18.8■□□□□ 0.6
SORL1-205ENST00000527649 NWD1Q149M9 1564 aa18.79■□□□□ 0.6
SORL1-205ENST00000527649 EVC2Q86UK5 1308 aa18.79■□□□□ 0.6
SORL1-205ENST00000527649 CDCA8Q53HL2 280 aa18.78■□□□□ 0.6
SORL1-205ENST00000527649 RBM33Q96EV2 1170 aaKnown RBP18.78■□□□□ 0.6
SORL1-205ENST00000527649 CABP2Q9NPB3 220 aa18.78■□□□□ 0.6
SORL1-205ENST00000527649 STRCP1A6NGW2 1772 aa18.77■□□□□ 0.59
SORL1-205ENST00000527649 CDK19Q9BWU1 502 aa18.76■□□□□ 0.59
SORL1-205ENST00000527649 MYOM1P52179 1685 aa18.75■□□□□ 0.59
SORL1-205ENST00000527649 SRPK2P78362 688 aaKnown RBP18.75■□□□□ 0.59
SORL1-205ENST00000527649 ADGRB2O60241 1585 aa18.74■□□□□ 0.59
SORL1-205ENST00000527649 WASLO00401 505 aaPredicted RBP18.73■□□□□ 0.59
SORL1-205ENST00000527649 NKTRP30414 1462 aaKnown RBP18.71■□□□□ 0.59
SORL1-205ENST00000527649 ZNF335Q9H4Z2 1342 aaPredicted RBP18.71■□□□□ 0.59
SORL1-205ENST00000527649 PUS7Q96PZ0 661 aaKnown RBP18.7■□□□□ 0.58
SORL1-205ENST00000527649 NALCNQ8IZF0 1738 aa18.7■□□□□ 0.58
SORL1-205ENST00000527649 PROSER2Q86WR7 435 aaPredicted RBP18.7■□□□□ 0.58
SORL1-205ENST00000527649 PANK3Q9H999 370 aa18.7■□□□□ 0.58
SORL1-205ENST00000527649 AEBP2Q6ZN18 517 aaPredicted RBP18.69■□□□□ 0.58
SORL1-205ENST00000527649 TMC1Q8TDI8 760 aa18.69■□□□□ 0.58
SORL1-205ENST00000527649 SLC12A5Q9H2X9 1139 aa18.69■□□□□ 0.58
SORL1-205ENST00000527649 DMRT2Q9Y5R5 561 aa18.69■□□□□ 0.58
SORL1-205ENST00000527649 ADGRL3Q9HAR2 1447 aa18.67■□□□□ 0.58
SORL1-205ENST00000527649 ATAD2Q6PL18 1390 aa18.67■□□□□ 0.58
SORL1-205ENST00000527649 PRR36Q9H6K5 1346 aa18.67■□□□□ 0.58
SORL1-205ENST00000527649 NUTM2FA1L443 756 aa18.67■□□□□ 0.58
SORL1-205ENST00000527649 TMEM94Q12767 1356 aa18.66■□□□□ 0.58
SORL1-205ENST00000527649 ATP7BP35670 1465 aa18.66■□□□□ 0.58
SORL1-205ENST00000527649 NUDT16Q96DE0 195 aaKnown RBP18.65■□□□□ 0.58
SORL1-205ENST00000527649 C14orf37Q86TY3 774 aa18.65■□□□□ 0.58
SORL1-205ENST00000527649 PER1O15534 1290 aaPredicted RBP18.64■□□□□ 0.57
SORL1-205ENST00000527649 MIER1Q8N108 512 aa18.64■□□□□ 0.57
SORL1-205ENST00000527649 CABP1Q9NZU7 370 aa18.64■□□□□ 0.57
SORL1-205ENST00000527649 USP32Q8NFA0 1604 aa18.63■□□□□ 0.57
SORL1-205ENST00000527649 CDC42BPGQ6DT37 1551 aa18.63■□□□□ 0.57
SORL1-205ENST00000527649 CARD14Q9BXL6 1004 aa18.62■□□□□ 0.57
SORL1-205ENST00000527649 CD163L1Q9NR16 1453 aa18.61■□□□□ 0.57
SORL1-205ENST00000527649 FMN2Q9NZ56 1722 aa18.61■□□□□ 0.57
SORL1-205ENST00000527649 PPIP5K1Q6PFW1 1433 aa18.61■□□□□ 0.57
SORL1-205ENST00000527649 CCDC61Q9Y6R9 512 aa18.61■□□□□ 0.57
SORL1-205ENST00000527649 LRRC7Q96NW7 1537 aa18.61■□□□□ 0.57
SORL1-205ENST00000527649 NINLQ9Y2I6 1382 aa18.61■□□□□ 0.57
SORL1-205ENST00000527649 CNGB1Q14028 1251 aaPredicted RBP18.6■□□□□ 0.57
SORL1-205ENST00000527649 XIRP1Q702N8 1843 aaKnown RBP18.6■□□□□ 0.57
SORL1-205ENST00000527649 A0A1W2PP64 1363 aa18.6■□□□□ 0.57
SORL1-205ENST00000527649 ANKRD36BQ8N2N9 1353 aa18.6■□□□□ 0.57
SORL1-205ENST00000527649 TOPAZ1Q8N9V7 1692 aa18.6■□□□□ 0.57
SORL1-205ENST00000527649 RGPD8O14715 1765 aaPredicted RBP18.6■□□□□ 0.57
SORL1-205ENST00000527649 C19orf44Q9H6X5 657 aa18.58■□□□□ 0.57
SORL1-205ENST00000527649 ANP32CO43423 234 aa18.58■□□□□ 0.56
SORL1-205ENST00000527649 NCOA3Q9Y6Q9 1424 aa18.57■□□□□ 0.56
SORL1-205ENST00000527649 KNSTRNQ9Y448 316 aa18.57■□□□□ 0.56
SORL1-205ENST00000527649 ANKARQ7Z5J8 1434 aa18.57■□□□□ 0.56
SORL1-205ENST00000527649 NSD3Q9BZ95 1437 aa18.56■□□□□ 0.56
SORL1-205ENST00000527649 TERF2IPQ9NYB0 399 aa18.55■□□□□ 0.56
SORL1-205ENST00000527649 AMER1Q5JTC6 1135 aaPredicted RBP18.55■□□□□ 0.56
SORL1-205ENST00000527649 PRKRIP1Q9H875 184 aaPredicted RBP18.55■□□□□ 0.56
SORL1-205ENST00000527649 CPSF1Q10570 1443 aaKnown RBP18.54■□□□□ 0.56
SORL1-205ENST00000527649 CC2D1BQ5T0F9 858 aaKnown RBP18.54■□□□□ 0.56
SORL1-205ENST00000527649 PMFBP1Q8TBY8 1022 aa18.54■□□□□ 0.56
SORL1-205ENST00000527649 ITSN1Q15811 1721 aa18.53■□□□□ 0.56
SORL1-205ENST00000527649 PLEKHG3A1L390 1219 aa18.53■□□□□ 0.56
SORL1-205ENST00000527649 HDGFL2Q7Z4V5 671 aaPredicted RBP18.53■□□□□ 0.56
SORL1-205ENST00000527649 LTBP4Q8N2S1 1624 aa18.53■□□□□ 0.56
SORL1-205ENST00000527649 PELP1Q8IZL8 1130 aaKnown RBP18.53■□□□□ 0.56
SORL1-205ENST00000527649 ACEP12821 1306 aa18.52■□□□□ 0.56
SORL1-205ENST00000527649 MSH6P52701 1360 aa18.52■□□□□ 0.56
SORL1-205ENST00000527649 DCCP43146 1447 aa18.52■□□□□ 0.56
SORL1-205ENST00000527649 ATF3P18847 181 aa18.52■□□□□ 0.55
SORL1-205ENST00000527649 KTN1Q86UP2 1357 aaKnown RBP18.51■□□□□ 0.55
SORL1-205ENST00000527649 MST1RQ04912 1400 aa18.5■□□□□ 0.55
SORL1-205ENST00000527649 AKAP12Q02952 1782 aa18.5■□□□□ 0.55
SORL1-205ENST00000527649 C1orf167Q5SNV9 1468 aa18.5■□□□□ 0.55
SORL1-205ENST00000527649 ESCO1Q5FWF5 840 aa18.5■□□□□ 0.55
SORL1-205ENST00000527649 ORAI2Q96SN7 254 aa18.5■□□□□ 0.55
SORL1-205ENST00000527649 POLR3AO14802 1390 aaPredicted RBP18.48■□□□□ 0.55
SORL1-205ENST00000527649 CADPS2Q86UW7 1296 aa18.48■□□□□ 0.55
SORL1-205ENST00000527649 MON2Q7Z3U7 1717 aa18.48■□□□□ 0.55
SORL1-205ENST00000527649 PARD3Q8TEW0 1356 aa18.48■□□□□ 0.55
SORL1-205ENST00000527649 CGNL1Q0VF96 1302 aa18.48■□□□□ 0.55
SORL1-205ENST00000527649 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.47■□□□□ 0.55
SORL1-205ENST00000527649 NGDNQ8NEJ9 315 aaKnown RBP18.47■□□□□ 0.55
SORL1-205ENST00000527649 PHF8Q9UPP1 1060 aa18.47■□□□□ 0.55
SORL1-205ENST00000527649 NPC1L1Q9UHC9 1359 aa18.47■□□□□ 0.55
SORL1-205ENST00000527649 EDC4Q6P2E9 1401 aaKnown RBP18.46■□□□□ 0.55
SORL1-205ENST00000527649 ZNF692Q9BU19 519 aaPredicted RBP18.46■□□□□ 0.55
SORL1-205ENST00000527649 USP6P35125 1406 aa18.46■□□□□ 0.55
SORL1-205ENST00000527649 NRKQ7Z2Y5 1582 aa18.44■□□□□ 0.54
SORL1-205ENST00000527649 FYB1O15117 783 aa18.44■□□□□ 0.54
SORL1-205ENST00000527649 RALBP1Q15311 655 aa18.44■□□□□ 0.54
SORL1-205ENST00000527649 GGNBP2Q9H3C7 697 aa18.43■□□□□ 0.54
SORL1-205ENST00000527649 SSH2Q76I76 1423 aa18.43■□□□□ 0.54
SORL1-205ENST00000527649 FOXO3O43524 673 aa18.42■□□□□ 0.54
SORL1-205ENST00000527649 CCDC184Q52MB2 194 aa18.42■□□□□ 0.54
SORL1-205ENST00000527649 NME9Q86XW9 330 aa18.42■□□□□ 0.54
SORL1-205ENST00000527649 TTC21BQ7Z4L5 1316 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms