RNA–Protein interactions for RNA: ENST00000527649.1

SORL1-205, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 1,765 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-205ENST00000527649 FUBP3Q96I24 572 aaKnown RBP eCLIP14.27□□□□□ -0.133e-6■■■■■ 68.4
SORL1-205ENST00000527649 RBM22Q9NW64 420 aaKnown RBP eCLIP13.81□□□□□ -0.28e-10■■■■■ 48.1
SORL1-205ENST00000527649 TIAL1Q01085 375 aaKnown RBP eCLIP13.43□□□□□ -0.268e-8■■■■□ 25.6
SORL1-205ENST00000527649 AQRO60306 1485 aaKnown RBP eCLIP22.28■■□□□ 1.164e-9■■■■□ 20.7
SORL1-205ENST00000527649 SND1Q7KZF4 910 aaKnown RBP eCLIP14.06□□□□□ -0.164e-11■■■■□ 20.1
SORL1-205ENST00000527649 YBX3P16989 372 aaKnown RBP eCLIP16.3■□□□□ 0.27e-12■■□□□ 13
SORL1-205ENST00000527649 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.5□□□□□ -0.093e-6■■□□□ 11.9
SORL1-205ENST00000527649 EFTUD2Q15029 972 aaKnown RBP eCLIP13.6□□□□□ -0.234e-6■■□□□ 11.5
SORL1-205ENST00000527649 PRPF4O43172 522 aaKnown RBP eCLIP13.35□□□□□ -0.272e-9■□□□□ 9.8
SORL1-205ENST00000527649 PPIGQ13427 754 aaKnown RBP eCLIP14.5□□□□□ -0.095e-7■□□□□ 9.2
SORL1-205ENST00000527649 PABPN1Q86U42 306 aaKnown RBP eCLIP25■■□□□ 1.591e-7■□□□□ 8.9
Retrieved 11 of 11 RNA–protein pairs in 6.1 ms