RNA–Protein interactions for RNA: ENST00000527547.5

CDC27-204, Transcript of cell division cycle 27, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC27, Length 2,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-204ENST00000527547 SLC12A5Q9H2X9 1139 aa12.64□□□□□ -0.39
CDC27-204ENST00000527547 NPHP4O75161 1426 aaPredicted RBP12.64□□□□□ -0.39
CDC27-204ENST00000527547 KNDC1Q76NI1 1749 aa12.63□□□□□ -0.39
CDC27-204ENST00000527547 CPS1P31327 1500 aa12.63□□□□□ -0.39
CDC27-204ENST00000527547 PER1O15534 1290 aaPredicted RBP12.63□□□□□ -0.39
CDC27-204ENST00000527547 SLC24A1O60721 1099 aa12.63□□□□□ -0.39
CDC27-204ENST00000527547 KCNA6P17658 529 aa12.63□□□□□ -0.39
CDC27-204ENST00000527547 CDK19Q9BWU1 502 aa12.63□□□□□ -0.39
CDC27-204ENST00000527547 DIP2AQ14689 1571 aa12.62□□□□□ -0.39
CDC27-204ENST00000527547 RBM33Q96EV2 1170 aaKnown RBP12.62□□□□□ -0.39
CDC27-204ENST00000527547 PRKRIP1Q9H875 184 aaPredicted RBP12.62□□□□□ -0.39
CDC27-204ENST00000527547 LMTK3Q96Q04 1460 aa12.61□□□□□ -0.39
CDC27-204ENST00000527547 FAM135BQ49AJ0 1406 aa12.61□□□□□ -0.39
CDC27-204ENST00000527547 YTHDC1Q96MU7 727 aaKnown RBP12.6□□□□□ -0.39
CDC27-204ENST00000527547 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.6□□□□□ -0.39
CDC27-204ENST00000527547 CC2D1BQ5T0F9 858 aaKnown RBP12.6□□□□□ -0.39
CDC27-204ENST00000527547 SIRT1Q96EB6 747 aa12.6□□□□□ -0.39
CDC27-204ENST00000527547 NUTM2FA1L443 756 aa12.59□□□□□ -0.39
CDC27-204ENST00000527547 CCDC184Q52MB2 194 aa12.59□□□□□ -0.39
CDC27-204ENST00000527547 CARD14Q9BXL6 1004 aa12.59□□□□□ -0.39
CDC27-204ENST00000527547 XRN1Q8IZH2 1706 aaKnown RBP12.59□□□□□ -0.39
CDC27-204ENST00000527547 WASLO00401 505 aaPredicted RBP12.58□□□□□ -0.4
CDC27-204ENST00000527547 PTCH1Q13635 1447 aa12.57□□□□□ -0.4
CDC27-204ENST00000527547 CHD2O14647 1828 aaKnown RBP12.57□□□□□ -0.4
CDC27-204ENST00000527547 KNSTRNQ9Y448 316 aa12.57□□□□□ -0.4
CDC27-204ENST00000527547 PIK3R4Q99570 1358 aa12.57□□□□□ -0.4
CDC27-204ENST00000527547 CABP1Q9NZU7 370 aa12.56□□□□□ -0.4
CDC27-204ENST00000527547 PUS7Q96PZ0 661 aaKnown RBP12.55□□□□□ -0.4
CDC27-204ENST00000527547 ATAD2Q6PL18 1390 aa12.55□□□□□ -0.4
CDC27-204ENST00000527547 AMER1Q5JTC6 1135 aaPredicted RBP12.55□□□□□ -0.4
CDC27-204ENST00000527547 PRR36Q9H6K5 1346 aa12.55□□□□□ -0.4
CDC27-204ENST00000527547 CCER2I3L3R5 266 aa12.54□□□□□ -0.4
CDC27-204ENST00000527547 NSD3Q9BZ95 1437 aa12.54□□□□□ -0.4
CDC27-204ENST00000527547 NUDT16Q96DE0 195 aaKnown RBP12.54□□□□□ -0.4
CDC27-204ENST00000527547 A0A1W2PP64 1363 aa12.53□□□□□ -0.4
CDC27-204ENST00000527547 KTN1Q86UP2 1357 aaKnown RBP12.53□□□□□ -0.4
CDC27-204ENST00000527547 STRCQ7RTU9 1775 aa12.53□□□□□ -0.4
CDC27-204ENST00000527547 CD163L1Q9NR16 1453 aa12.52□□□□□ -0.4
CDC27-204ENST00000527547 ANKRD36BQ8N2N9 1353 aa12.52□□□□□ -0.41
CDC27-204ENST00000527547 ADGRB2O60241 1585 aa12.52□□□□□ -0.41
CDC27-204ENST00000527547 PARD3Q8TEW0 1356 aa12.52□□□□□ -0.41
CDC27-204ENST00000527547 PPIP5K1Q6PFW1 1433 aa12.52□□□□□ -0.41
CDC27-204ENST00000527547 MRS2Q9HD23 443 aa12.51□□□□□ -0.41
CDC27-204ENST00000527547 ATP7BP35670 1465 aa12.51□□□□□ -0.41
CDC27-204ENST00000527547 RALBP1Q15311 655 aa12.5□□□□□ -0.41
CDC27-204ENST00000527547 NALCNQ8IZF0 1738 aa12.5□□□□□ -0.41
CDC27-204ENST00000527547 PROSER2Q86WR7 435 aaPredicted RBP12.5□□□□□ -0.41
CDC27-204ENST00000527547 CCDC61Q9Y6R9 512 aa12.5□□□□□ -0.41
CDC27-204ENST00000527547 STRCP1A6NGW2 1772 aa12.49□□□□□ -0.41
CDC27-204ENST00000527547 C14orf37Q86TY3 774 aa12.49□□□□□ -0.41
CDC27-204ENST00000527547 NINLQ9Y2I6 1382 aa12.49□□□□□ -0.41
CDC27-204ENST00000527547 MYBBP1AQ9BQG0 1328 aaKnown RBP12.49□□□□□ -0.41
CDC27-204ENST00000527547 TERF2IPQ9NYB0 399 aa12.49□□□□□ -0.41
CDC27-204ENST00000527547 NWD1Q149M9 1564 aa12.49□□□□□ -0.41
CDC27-204ENST00000527547 PMFBP1Q8TBY8 1022 aa12.48□□□□□ -0.41
CDC27-204ENST00000527547 USP32Q8NFA0 1604 aa12.48□□□□□ -0.41
CDC27-204ENST00000527547 HDGFL2Q7Z4V5 671 aaPredicted RBP12.48□□□□□ -0.41
CDC27-204ENST00000527547 RGPD8O14715 1765 aaPredicted RBP12.47□□□□□ -0.41
CDC27-204ENST00000527547 TNNT2P45379 298 aaPredicted RBP12.47□□□□□ -0.41
CDC27-204ENST00000527547 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.47□□□□□ -0.41
CDC27-204ENST00000527547 FAM9BQ8IZU0 186 aa12.47□□□□□ -0.41
CDC27-204ENST00000527547 NKTRP30414 1462 aaKnown RBP12.46□□□□□ -0.41
CDC27-204ENST00000527547 GGNBP2Q9H3C7 697 aa12.46□□□□□ -0.41
CDC27-204ENST00000527547 CGNL1Q0VF96 1302 aa12.46□□□□□ -0.41
CDC27-204ENST00000527547 ZNF335Q9H4Z2 1342 aaPredicted RBP12.46□□□□□ -0.41
CDC27-204ENST00000527547 ACEP12821 1306 aa12.45□□□□□ -0.42
CDC27-204ENST00000527547 ADGRL3Q9HAR2 1447 aa12.45□□□□□ -0.42
CDC27-204ENST00000527547 PPP2R1AP30153 589 aa12.45□□□□□ -0.42
CDC27-204ENST00000527547 NPC1L1Q9UHC9 1359 aa12.45□□□□□ -0.42
CDC27-204ENST00000527547 TOPAZ1Q8N9V7 1692 aa12.45□□□□□ -0.42
CDC27-204ENST00000527547 CPSF1Q10570 1443 aaKnown RBP12.45□□□□□ -0.42
CDC27-204ENST00000527547 CDC42BPGQ6DT37 1551 aa12.45□□□□□ -0.42
CDC27-204ENST00000527547 NLRP13Q86W25 1043 aa12.44□□□□□ -0.42
CDC27-204ENST00000527547 TMEM94Q12767 1356 aa12.44□□□□□ -0.42
CDC27-204ENST00000527547 FMN2Q9NZ56 1722 aa12.44□□□□□ -0.42
CDC27-204ENST00000527547 FYB1O15117 783 aa12.44□□□□□ -0.42
CDC27-204ENST00000527547 MORC1Q86VD1 984 aa12.44□□□□□ -0.42
CDC27-204ENST00000527547 ZRANB1Q9UGI0 708 aa12.43□□□□□ -0.42
CDC27-204ENST00000527547 PLEKHG3A1L390 1219 aa12.43□□□□□ -0.42
CDC27-204ENST00000527547 SENP3-EIF4A1A0A087X0R7 540 aa12.42□□□□□ -0.42
CDC27-204ENST00000527547 NME9Q86XW9 330 aa12.42□□□□□ -0.42
CDC27-204ENST00000527547 ITSN1Q15811 1721 aa12.42□□□□□ -0.42
CDC27-204ENST00000527547 BRD4O60885 1362 aaPredicted RBP12.42□□□□□ -0.42
CDC27-204ENST00000527547 NGDNQ8NEJ9 315 aaKnown RBP12.41□□□□□ -0.42
CDC27-204ENST00000527547 AKAP12Q02952 1782 aa12.41□□□□□ -0.42
CDC27-204ENST00000527547 FBLN1P23142 703 aa12.41□□□□□ -0.42
CDC27-204ENST00000527547 EDC4Q6P2E9 1401 aaKnown RBP12.4□□□□□ -0.42
CDC27-204ENST00000527547 ESCO1Q5FWF5 840 aa12.4□□□□□ -0.42
CDC27-204ENST00000527547 PNISRQ8TF01 805 aaKnown RBP12.4□□□□□ -0.42
CDC27-204ENST00000527547 ORAI2Q96SN7 254 aa12.4□□□□□ -0.42
CDC27-204ENST00000527547 MON2Q7Z3U7 1717 aa12.4□□□□□ -0.42
CDC27-204ENST00000527547 ANKARQ7Z5J8 1434 aa12.4□□□□□ -0.42
CDC27-204ENST00000527547 C19orf44Q9H6X5 657 aa12.4□□□□□ -0.42
CDC27-204ENST00000527547 ZNF692Q9BU19 519 aaPredicted RBP12.39□□□□□ -0.43
CDC27-204ENST00000527547 USP6P35125 1406 aa12.39□□□□□ -0.43
CDC27-204ENST00000527547 KIF20BQ96Q89 1820 aa12.38□□□□□ -0.43
CDC27-204ENST00000527547 PHF8Q9UPP1 1060 aa12.38□□□□□ -0.43
CDC27-204ENST00000527547 TTC21BQ7Z4L5 1316 aa12.38□□□□□ -0.43
CDC27-204ENST00000527547 NSD2O96028 1365 aa12.38□□□□□ -0.43
CDC27-204ENST00000527547 POLR3AO14802 1390 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms