RNA–Protein interactions for RNA: ENST00000527527.1

PITPNM1-210, Transcript of phosphatidylinositol transfer protein membrane associated 1, human

TSL 4

Gene PITPNM1, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PITPNM1-210	ENST00000527527	KNDC1	Q76NI1	1749 aa		33.89	■■■■□ 3.02
PITPNM1-210	ENST00000527527	ABCC11	Q96J66	1382 aa		33.88	■■■■□ 3.01
PITPNM1-210	ENST00000527527	PLEKHH1	Q9ULM0	1364 aa		33.88	■■■■□ 3.01
PITPNM1-210	ENST00000527527	LAMC1	P11047	1609 aa		33.88	■■■■□ 3.01
PITPNM1-210	ENST00000527527	PNPLA6	Q8IY17	1366 aa		33.87	■■■■□ 3.01
PITPNM1-210	ENST00000527527	NRXN1	Q9ULB1	1477 aa		33.87	■■■■□ 3.01
PITPNM1-210	ENST00000527527	MYOM2	P54296	1465 aa		33.86	■■■■□ 3.01
PITPNM1-210	ENST00000527527	YTHDC2	Q9H6S0	1430 aa	Known RBP	33.86	■■■■□ 3.01
PITPNM1-210	ENST00000527527	C14orf93	Q9H972	538 aa	Known RBP	33.84	■■■■□ 3.01
PITPNM1-210	ENST00000527527	CFAP70	Q5T0N1	1121 aa		33.83	■■■■□ 3.01
PITPNM1-210	ENST00000527527	SOS2	Q07890	1332 aa	Predicted RBP	33.81	■■■■□ 3
PITPNM1-210	ENST00000527527	NUTM2F	A1L443	756 aa		33.8	■■■■□ 3
PITPNM1-210	ENST00000527527	ZNF772	Q68DY9	489 aa	Predicted RBP	33.8	■■■■□ 3
PITPNM1-210	ENST00000527527	ESCO1	Q5FWF5	840 aa		33.79	■■■■□ 3
PITPNM1-210	ENST00000527527	AFF2	P51816	1311 aa		33.75	■■■□□ 2.99
PITPNM1-210	ENST00000527527	HRC	P23327	699 aa		33.74	■■■□□ 2.99
PITPNM1-210	ENST00000527527	DHX57	Q6P158	1386 aa	Known RBP	33.73	■■■□□ 2.99
PITPNM1-210	ENST00000527527	FMN2	Q9NZ56	1722 aa		33.72	■■■□□ 2.99
PITPNM1-210	ENST00000527527	C8orf37	Q96NL8	207 aa		33.71	■■■□□ 2.99
PITPNM1-210	ENST00000527527	XPC	Q01831	940 aa	Predicted RBP	33.7	■■■□□ 2.99
PITPNM1-210	ENST00000527527	SIRT1	Q96EB6	747 aa		33.7	■■■□□ 2.99
PITPNM1-210	ENST00000527527	NPHP3	Q7Z494	1330 aa		33.7	■■■□□ 2.99
PITPNM1-210	ENST00000527527	FOXO3	O43524	673 aa		33.69	■■■□□ 2.98
PITPNM1-210	ENST00000527527	ADAMTS2	O95450	1211 aa		33.69	■■■□□ 2.98
PITPNM1-210	ENST00000527527	PXDN	Q92626	1479 aa		33.69	■■■□□ 2.98
PITPNM1-210	ENST00000527527	KDM2A	Q9Y2K7	1162 aa		33.68	■■■□□ 2.98
PITPNM1-210	ENST00000527527	SAFB2	Q14151	953 aa	Known RBP eCLIP	33.66	■■■□□ 2.98
PITPNM1-210	ENST00000527527	PRAM1	Q96QH2	718 aa		33.66	■■■□□ 2.98
PITPNM1-210	ENST00000527527	ADGRB1	O14514	1584 aa		33.65	■■■□□ 2.98
PITPNM1-210	ENST00000527527	DCAF11	Q8TEB1	546 aa		33.65	■■■□□ 2.98
PITPNM1-210	ENST00000527527	COL22A1	Q8NFW1	1626 aa	Predicted RBP	33.64	■■■□□ 2.98
PITPNM1-210	ENST00000527527	RXRB	P28702	533 aa		33.63	■■■□□ 2.97
PITPNM1-210	ENST00000527527	DLC1	Q96QB1	1528 aa		33.62	■■■□□ 2.97
PITPNM1-210	ENST00000527527	NGLY1	Q96IV0	654 aa		33.59	■■■□□ 2.97
PITPNM1-210	ENST00000527527	RGPD8	O14715	1765 aa	Predicted RBP	33.59	■■■□□ 2.97
PITPNM1-210	ENST00000527527	KIF1A	Q12756	1690 aa		33.58	■■■□□ 2.97
PITPNM1-210	ENST00000527527	POGK	Q9P215	609 aa		33.57	■■■□□ 2.96
PITPNM1-210	ENST00000527527	TRAK1	Q9UPV9	953 aa		33.57	■■■□□ 2.96
PITPNM1-210	ENST00000527527	QTRT2	Q9H974	415 aa	Known RBP	33.55	■■■□□ 2.96
PITPNM1-210	ENST00000527527	CDK12	Q9NYV4	1490 aa	Predicted RBP	33.53	■■■□□ 2.96
PITPNM1-210	ENST00000527527	PHF8	Q9UPP1	1060 aa		33.51	■■■□□ 2.95
PITPNM1-210	ENST00000527527	ADGRB2	O60241	1585 aa		33.51	■■■□□ 2.95
PITPNM1-210	ENST00000527527	KRT28	Q7Z3Y7	464 aa		33.5	■■■□□ 2.95
PITPNM1-210	ENST00000527527	RGS12	O14924	1447 aa		33.49	■■■□□ 2.95
PITPNM1-210	ENST00000527527	STAC3	Q96MF2	364 aa		33.49	■■■□□ 2.95
PITPNM1-210	ENST00000527527	HIRIP3	Q9BW71	556 aa	Predicted RBP	33.49	■■■□□ 2.95
PITPNM1-210	ENST00000527527	USP21	Q9UK80	565 aa		33.49	■■■□□ 2.95
PITPNM1-210	ENST00000527527	USP32	Q8NFA0	1604 aa		33.49	■■■□□ 2.95
PITPNM1-210	ENST00000527527	SPATA31A3	Q5VYP0	1347 aa		33.49	■■■□□ 2.95
PITPNM1-210	ENST00000527527	RBM6	P78332	1123 aa	Known RBP	33.48	■■■□□ 2.95
PITPNM1-210	ENST00000527527	MINK1	Q8N4C8	1332 aa	Predicted RBP	33.47	■■■□□ 2.95
PITPNM1-210	ENST00000527527	FNBP4	Q8N3X1	1017 aa	Predicted RBP	33.46	■■■□□ 2.95
PITPNM1-210	ENST00000527527	ANKAR	Q7Z5J8	1434 aa		33.45	■■■□□ 2.94
PITPNM1-210	ENST00000527527	MARF1	Q9Y4F3	1742 aa	Known RBP	33.44	■■■□□ 2.94
PITPNM1-210	ENST00000527527	UPF1	Q92900	1129 aa	Known RBP eCLIP	33.43	■■■□□ 2.94
PITPNM1-210	ENST00000527527	PMFBP1	Q8TBY8	1022 aa		33.42	■■■□□ 2.94
PITPNM1-210	ENST00000527527	TNS3	Q68CZ2	1445 aa		33.41	■■■□□ 2.94
PITPNM1-210	ENST00000527527	ARHGEF28	Q8N1W1	1705 aa	Known RBP	33.4	■■■□□ 2.94
PITPNM1-210	ENST00000527527	PRR36	Q9H6K5	1346 aa		33.4	■■■□□ 2.94
PITPNM1-210	ENST00000527527	ATRN	O75882	1429 aa		33.39	■■■□□ 2.94
PITPNM1-210	ENST00000527527	TRPC5	Q9UL62	973 aa	Predicted RBP	33.39	■■■□□ 2.94
PITPNM1-210	ENST00000527527	BCL9L	Q86UU0	1499 aa		33.37	■■■□□ 2.93
PITPNM1-210	ENST00000527527	PSME1	Q06323	249 aa		33.37	■■■□□ 2.93
PITPNM1-210	ENST00000527527	PLEKHG5	O94827	1062 aa		33.36	■■■□□ 2.93
PITPNM1-210	ENST00000527527	TULP4	Q9NRJ4	1543 aa		33.36	■■■□□ 2.93
PITPNM1-210	ENST00000527527	SBNO1	A3KN83	1393 aa		33.35	■■■□□ 2.93
PITPNM1-210	ENST00000527527	WASL	O00401	505 aa	Predicted RBP	33.35	■■■□□ 2.93
PITPNM1-210	ENST00000527527	CABLES1	Q8TDN4	633 aa		33.34	■■■□□ 2.93
PITPNM1-210	ENST00000527527	EIF3A	Q14152	1382 aa	Known RBP	33.33	■■■□□ 2.93
PITPNM1-210	ENST00000527527	LMOD2	Q6P5Q4	547 aa		33.32	■■■□□ 2.92
PITPNM1-210	ENST00000527527	KIAA1210	Q9ULL0	1709 aa		33.31	■■■□□ 2.92
PITPNM1-210	ENST00000527527	ABCA3	Q99758	1704 aa		33.28	■■■□□ 2.92
PITPNM1-210	ENST00000527527	TRPM3	Q9HCF6	1732 aa	Predicted RBP	33.28	■■■□□ 2.92
PITPNM1-210	ENST00000527527	HAP1	P54257	671 aa	Predicted RBP	33.28	■■■□□ 2.92
PITPNM1-210	ENST00000527527	NBPF1	Q3BBV0	1214 aa		33.28	■■■□□ 2.92
PITPNM1-210	ENST00000527527	SLIT2	O94813	1529 aa		33.28	■■■□□ 2.92
PITPNM1-210	ENST00000527527	ARHGEF10	O15013	1369 aa		33.27	■■■□□ 2.92
PITPNM1-210	ENST00000527527	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	33.25	■■■□□ 2.91
PITPNM1-210	ENST00000527527	ATP7B	P35670	1465 aa		33.25	■■■□□ 2.91
PITPNM1-210	ENST00000527527	GPRASP1	Q5JY77	1395 aa		33.23	■■■□□ 2.91
PITPNM1-210	ENST00000527527	UNC5CL	Q8IV45	518 aa		33.23	■■■□□ 2.91
PITPNM1-210	ENST00000527527	GJD4	Q96KN9	370 aa	Predicted RBP	33.22	■■■□□ 2.91
PITPNM1-210	ENST00000527527	ALS2	Q96Q42	1657 aa		33.21	■■■□□ 2.91
PITPNM1-210	ENST00000527527	NGDN	Q8NEJ9	315 aa	Known RBP	33.2	■■■□□ 2.91
PITPNM1-210	ENST00000527527	NUDT16	Q96DE0	195 aa	Known RBP	33.2	■■■□□ 2.91
PITPNM1-210	ENST00000527527	SIN3A	Q96ST3	1273 aa		33.2	■■■□□ 2.91
PITPNM1-210	ENST00000527527	CDK19	Q9BWU1	502 aa		33.19	■■■□□ 2.9
PITPNM1-210	ENST00000527527	GLI3	P10071	1580 aa		33.18	■■■□□ 2.9
PITPNM1-210	ENST00000527527	PLCH1	Q4KWH8	1693 aa		33.18	■■■□□ 2.9
PITPNM1-210	ENST00000527527	L3MBTL2	Q969R5	705 aa		33.18	■■■□□ 2.9
PITPNM1-210	ENST00000527527	ITSN1	Q15811	1721 aa		33.18	■■■□□ 2.9
PITPNM1-210	ENST00000527527	RALGAPB	Q86X10	1494 aa		33.17	■■■□□ 2.9
PITPNM1-210	ENST00000527527	ATAD2	Q6PL18	1390 aa		33.16	■■■□□ 2.9
PITPNM1-210	ENST00000527527	PAK3	O75914	559 aa	Predicted RBP	33.13	■■■□□ 2.89
PITPNM1-210	ENST00000527527	FAM83G	A6ND36	823 aa		33.12	■■■□□ 2.89
PITPNM1-210	ENST00000527527	TOPAZ1	Q8N9V7	1692 aa		33.12	■■■□□ 2.89
PITPNM1-210	ENST00000527527	NWD2	Q9ULI1	1742 aa		33.11	■■■□□ 2.89
PITPNM1-210	ENST00000527527	NEUROD1	Q13562	356 aa		33.11	■■■□□ 2.89
PITPNM1-210	ENST00000527527	CRYBG1	Q9Y4K1	1723 aa		33.09	■■■□□ 2.89
PITPNM1-210	ENST00000527527	VPS72	Q15906	364 aa		33.08	■■■□□ 2.89

Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms