RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 USP21Q9UK80 565 aa31.16■■■□□ 2.58
PKP3-205ENST00000527442 ATAD2Q6PL18 1390 aa31.15■■■□□ 2.58
PKP3-205ENST00000527442 RPGRIP1LQ68CZ1 1315 aa31.14■■■□□ 2.58
PKP3-205ENST00000527442 ATRNO75882 1429 aa31.14■■■□□ 2.58
PKP3-205ENST00000527442 MYOM2P54296 1465 aa31.14■■■□□ 2.57
PKP3-205ENST00000527442 TRPC5Q9UL62 973 aaPredicted RBP31.12■■■□□ 2.57
PKP3-205ENST00000527442 PXDNQ92626 1479 aa31.12■■■□□ 2.57
PKP3-205ENST00000527442 FNBP4Q8N3X1 1017 aaPredicted RBP31.11■■■□□ 2.57
PKP3-205ENST00000527442 IFT172Q9UG01 1749 aa31.07■■■□□ 2.56
PKP3-205ENST00000527442 SLC4A1APQ9BWU0 796 aaKnown RBP31.06■■■□□ 2.56
PKP3-205ENST00000527442 NPHP3Q7Z494 1330 aa31.05■■■□□ 2.56
PKP3-205ENST00000527442 ESCO1Q5FWF5 840 aa31.05■■■□□ 2.56
PKP3-205ENST00000527442 BCL9LQ86UU0 1499 aa31.04■■■□□ 2.56
PKP3-205ENST00000527442 KNDC1Q76NI1 1749 aa31.04■■■□□ 2.56
PKP3-205ENST00000527442 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.02■■■□□ 2.56
PKP3-205ENST00000527442 XPCQ01831 940 aaPredicted RBP31.02■■■□□ 2.56
PKP3-205ENST00000527442 EP400Q96L91 3159 aa31.01■■■□□ 2.55
PKP3-205ENST00000527442 FMN2Q9NZ56 1722 aa31.01■■■□□ 2.55
PKP3-205ENST00000527442 TECPR2O15040 1411 aa31■■■□□ 2.55
PKP3-205ENST00000527442 ADGRF5Q8IZF2 1346 aa30.99■■■□□ 2.55
PKP3-205ENST00000527442 FOXO3O43524 673 aa30.98■■■□□ 2.55
PKP3-205ENST00000527442 FOXD1Q16676 465 aa30.97■■■□□ 2.55
PKP3-205ENST00000527442 SRCAPQ6ZRS2 3230 aa30.97■■■□□ 2.55
PKP3-205ENST00000527442 RAB3GAP2Q9H2M9 1393 aa30.95■■■□□ 2.55
PKP3-205ENST00000527442 KIF1AQ12756 1690 aa30.95■■■□□ 2.55
PKP3-205ENST00000527442 NUTM2FA1L443 756 aa30.95■■■□□ 2.55
PKP3-205ENST00000527442 WAPLQ7Z5K2 1190 aa30.95■■■□□ 2.55
PKP3-205ENST00000527442 STK26Q9P289 416 aa30.95■■■□□ 2.55
PKP3-205ENST00000527442 LRPPRCP42704 1394 aaKnown RBP30.94■■■□□ 2.54
PKP3-205ENST00000527442 SPATA31E1Q6ZUB1 1445 aa30.94■■■□□ 2.54
PKP3-205ENST00000527442 PLEKHH1Q9ULM0 1364 aa30.93■■■□□ 2.54
PKP3-205ENST00000527442 GLI3P10071 1580 aa30.93■■■□□ 2.54
PKP3-205ENST00000527442 CCDC144AA2RUR9 1427 aa30.93■■■□□ 2.54
PKP3-205ENST00000527442 USP32Q8NFA0 1604 aa30.91■■■□□ 2.54
PKP3-205ENST00000527442 RGPD8O14715 1765 aaPredicted RBP30.9■■■□□ 2.54
PKP3-205ENST00000527442 GJD4Q96KN9 370 aaPredicted RBP30.9■■■□□ 2.54
PKP3-205ENST00000527442 BRWD3Q6RI45 1802 aa30.89■■■□□ 2.54
PKP3-205ENST00000527442 RGL3Q3MIN7 710 aa30.89■■■□□ 2.54
PKP3-205ENST00000527442 ABCC11Q96J66 1382 aa30.89■■■□□ 2.54
PKP3-205ENST00000527442 SLIT2O94813 1529 aa30.88■■■□□ 2.53
PKP3-205ENST00000527442 HRCP23327 699 aa30.88■■■□□ 2.53
PKP3-205ENST00000527442 ZRANB1Q9UGI0 708 aa30.88■■■□□ 2.53
PKP3-205ENST00000527442 ANKRD30BQ9BXX2 1392 aa30.88■■■□□ 2.53
PKP3-205ENST00000527442 PIK3C2GO75747 1445 aa30.88■■■□□ 2.53
PKP3-205ENST00000527442 TMEM132EQ6IEE7 984 aa30.87■■■□□ 2.53
PKP3-205ENST00000527442 RALGAPBQ86X10 1494 aa30.87■■■□□ 2.53
PKP3-205ENST00000527442 SPATA31A3Q5VYP0 1347 aa30.86■■■□□ 2.53
PKP3-205ENST00000527442 YTHDC2Q9H6S0 1430 aaKnown RBP30.84■■■□□ 2.53
PKP3-205ENST00000527442 CCDC125Q86Z20 511 aa30.84■■■□□ 2.53
PKP3-205ENST00000527442 ABCA3Q99758 1704 aa30.84■■■□□ 2.53
PKP3-205ENST00000527442 PLCH1Q4KWH8 1693 aa30.83■■■□□ 2.53
PKP3-205ENST00000527442 UNC5CLQ8IV45 518 aa30.82■■■□□ 2.52
PKP3-205ENST00000527442 ACIN1Q9UKV3 1341 aaKnown RBP30.81■■■□□ 2.52
PKP3-205ENST00000527442 KRT28Q7Z3Y7 464 aa30.78■■■□□ 2.52
PKP3-205ENST00000527442 NWD2Q9ULI1 1742 aa30.78■■■□□ 2.52
PKP3-205ENST00000527442 BLMP54132 1417 aaPredicted RBP30.77■■■□□ 2.52
PKP3-205ENST00000527442 TNS3Q68CZ2 1445 aa30.77■■■□□ 2.52
PKP3-205ENST00000527442 MPHOSPH9Q99550 1183 aa30.75■■■□□ 2.51
PKP3-205ENST00000527442 NRXN1Q9ULB1 1477 aa30.71■■■□□ 2.51
PKP3-205ENST00000527442 CABLES1Q8TDN4 633 aa30.71■■■□□ 2.51
PKP3-205ENST00000527442 PHF8Q9UPP1 1060 aa30.71■■■□□ 2.51
PKP3-205ENST00000527442 SIRT1Q96EB6 747 aa30.7■■■□□ 2.51
PKP3-205ENST00000527442 PLEKHG5O94827 1062 aa30.68■■■□□ 2.5
PKP3-205ENST00000527442 HAP1P54257 671 aaPredicted RBP30.68■■■□□ 2.5
PKP3-205ENST00000527442 VPS72Q15906 364 aa30.67■■■□□ 2.5
PKP3-205ENST00000527442 DEFB132Q7Z7B7 95 aa30.67■■■□□ 2.5
PKP3-205ENST00000527442 SEPT12Q8IYM1 358 aa30.67■■■□□ 2.5
PKP3-205ENST00000527442 C14orf93Q9H972 538 aaKnown RBP30.67■■■□□ 2.5
PKP3-205ENST00000527442 NRAPQ86VF7 1730 aa30.67■■■□□ 2.5
PKP3-205ENST00000527442 SBNO1A3KN83 1393 aa30.66■■■□□ 2.5
PKP3-205ENST00000527442 PSME1Q06323 249 aa30.65■■■□□ 2.5
PKP3-205ENST00000527442 TRPM3Q9HCF6 1732 aaPredicted RBP30.64■■■□□ 2.5
PKP3-205ENST00000527442 CFAP70Q5T0N1 1121 aa30.64■■■□□ 2.5
PKP3-205ENST00000527442 DHX57Q6P158 1386 aaKnown RBP30.64■■■□□ 2.5
PKP3-205ENST00000527442 ADGRB2O60241 1585 aa30.63■■■□□ 2.49
PKP3-205ENST00000527442 SAFB2Q14151 953 aaKnown RBP eCLIP30.62■■■□□ 2.49
PKP3-205ENST00000527442 PRAM1Q96QH2 718 aa30.62■■■□□ 2.49
PKP3-205ENST00000527442 ARHGEF10O15013 1369 aa30.62■■■□□ 2.49
PKP3-205ENST00000527442 DLC1Q96QB1 1528 aa30.62■■■□□ 2.49
PKP3-205ENST00000527442 LMOD2Q6P5Q4 547 aa30.61■■■□□ 2.49
PKP3-205ENST00000527442 CCDC9Q9Y3X0 531 aaKnown RBP30.6■■■□□ 2.49
PKP3-205ENST00000527442 ALS2Q96Q42 1657 aa30.59■■■□□ 2.49
PKP3-205ENST00000527442 LRP5O75197 1615 aa30.59■■■□□ 2.49
PKP3-205ENST00000527442 ANKARQ7Z5J8 1434 aa30.59■■■□□ 2.49
PKP3-205ENST00000527442 ONECUT3O60422 494 aaPredicted RBP30.59■■■□□ 2.49
PKP3-205ENST00000527442 SF3B2Q13435 895 aaKnown RBP30.58■■■□□ 2.49
PKP3-205ENST00000527442 KRT27Q7Z3Y8 459 aa30.56■■■□□ 2.48
PKP3-205ENST00000527442 PMFBP1Q8TBY8 1022 aa30.56■■■□□ 2.48
PKP3-205ENST00000527442 ADGRB1O14514 1584 aa30.55■■■□□ 2.48
PKP3-205ENST00000527442 FAM83GA6ND36 823 aa30.55■■■□□ 2.48
PKP3-205ENST00000527442 COL14A1Q05707 1796 aaKnown RBP30.54■■■□□ 2.48
PKP3-205ENST00000527442 CRYBG1Q9Y4K1 1723 aa30.54■■■□□ 2.48
PKP3-205ENST00000527442 POGKQ9P215 609 aa30.51■■■□□ 2.47
PKP3-205ENST00000527442 A0A0G2JS52 829 aa30.49■■■□□ 2.47
PKP3-205ENST00000527442 MYT1Q01538 1121 aa30.49■■■□□ 2.47
PKP3-205ENST00000527442 RGPD1P0DJD0 1748 aa30.49■■■□□ 2.47
PKP3-205ENST00000527442 TULP4Q9NRJ4 1543 aa30.47■■■□□ 2.47
PKP3-205ENST00000527442 FAM98CQ17RN3 349 aaKnown RBP30.47■■■□□ 2.47
PKP3-205ENST00000527442 HIRIP3Q9BW71 556 aaPredicted RBP30.46■■■□□ 2.47
PKP3-205ENST00000527442 BTG4Q9NY30 223 aa30.46■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms