RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 ABCA6Q8N139 1617 aa12.74□□□□□ -0.37
USP35-201ENST00000526425 SCAF11Q99590 1463 aaKnown RBP12.74□□□□□ -0.37
USP35-201ENST00000526425 GPRASP1Q5JY77 1395 aa12.74□□□□□ -0.37
USP35-201ENST00000526425 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.74□□□□□ -0.37
USP35-201ENST00000526425 DHX37Q8IY37 1157 aaKnown RBP12.74□□□□□ -0.37
USP35-201ENST00000526425 ABCC3O15438 1527 aa12.74□□□□□ -0.37
USP35-201ENST00000526425 CFAP53Q96M91 514 aa12.73□□□□□ -0.37
USP35-201ENST00000526425 DIP2CQ9Y2E4 1556 aa12.73□□□□□ -0.37
USP35-201ENST00000526425 MAPK8IP2Q13387 824 aaPredicted RBP12.73□□□□□ -0.37
USP35-201ENST00000526425 BCL2L13Q9BXK5 485 aa12.73□□□□□ -0.37
USP35-201ENST00000526425 C14orf93Q9H972 538 aaKnown RBP12.73□□□□□ -0.37
USP35-201ENST00000526425 MAP3K4Q9Y6R4 1608 aa12.73□□□□□ -0.37
USP35-201ENST00000526425 SLC4A3P48751 1232 aa12.72□□□□□ -0.37
USP35-201ENST00000526425 GOLGA2Q08379 1002 aa12.72□□□□□ -0.37
USP35-201ENST00000526425 SKAP1Q86WV1 359 aa12.72□□□□□ -0.37
USP35-201ENST00000526425 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.72□□□□□ -0.37
USP35-201ENST00000526425 CRBNQ96SW2 442 aa12.72□□□□□ -0.37
USP35-201ENST00000526425 CLTCL1P53675 1640 aa12.71□□□□□ -0.37
USP35-201ENST00000526425 CEBPAP49715 358 aaPredicted RBP12.71□□□□□ -0.37
USP35-201ENST00000526425 BCORL1Q5H9F3 1711 aa12.71□□□□□ -0.37
USP35-201ENST00000526425 PER1O15534 1290 aaPredicted RBP12.71□□□□□ -0.38
USP35-201ENST00000526425 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.71□□□□□ -0.38
USP35-201ENST00000526425 GGNBP2Q9H3C7 697 aa12.71□□□□□ -0.38
USP35-201ENST00000526425 NAP1L2Q9ULW6 460 aaPredicted RBP12.71□□□□□ -0.38
USP35-201ENST00000526425 EID1Q9Y6B2 187 aa12.7□□□□□ -0.38
USP35-201ENST00000526425 EVC2Q86UK5 1308 aa12.7□□□□□ -0.38
USP35-201ENST00000526425 SPHKAPQ2M3C7 1700 aa12.7□□□□□ -0.38
USP35-201ENST00000526425 FRMPD1Q5SYB0 1578 aa12.7□□□□□ -0.38
USP35-201ENST00000526425 DEPDC5O75140 1603 aa12.69□□□□□ -0.38
USP35-201ENST00000526425 LMTK2Q8IWU2 1503 aa12.69□□□□□ -0.38
USP35-201ENST00000526425 CLUAP1Q96AJ1 413 aa12.69□□□□□ -0.38
USP35-201ENST00000526425 ZMYM3Q14202 1370 aa12.69□□□□□ -0.38
USP35-201ENST00000526425 PPRC1Q5VV67 1664 aaKnown RBP12.68□□□□□ -0.38
USP35-201ENST00000526425 CEP152O94986 1710 aa12.68□□□□□ -0.38
USP35-201ENST00000526425 VWDEQ8N2E2 1590 aa12.68□□□□□ -0.38
USP35-201ENST00000526425 RNF17Q9BXT8 1623 aaKnown RBP12.68□□□□□ -0.38
USP35-201ENST00000526425 TAF7LQ5H9L4 462 aa12.67□□□□□ -0.38
USP35-201ENST00000526425 COL17A1Q9UMD9 1497 aaPredicted RBP12.67□□□□□ -0.38
USP35-201ENST00000526425 MTHFSP49914 203 aa12.67□□□□□ -0.38
USP35-201ENST00000526425 PDE3BQ13370 1112 aa12.67□□□□□ -0.38
USP35-201ENST00000526425 PRAM1Q96QH2 718 aa12.67□□□□□ -0.38
USP35-201ENST00000526425 SMG6Q86US8 1419 aaKnown RBP12.67□□□□□ -0.38
USP35-201ENST00000526425 ARHGAP31Q2M1Z3 1444 aa12.66□□□□□ -0.38
USP35-201ENST00000526425 MROH1Q8NDA8 1641 aa12.66□□□□□ -0.38
USP35-201ENST00000526425 ZHX1Q9UKY1 873 aaPredicted RBP12.66□□□□□ -0.38
USP35-201ENST00000526425 MAPK8IP3Q9UPT6 1336 aa12.65□□□□□ -0.38
USP35-201ENST00000526425 RRP9O43818 475 aaKnown RBP12.65□□□□□ -0.38
USP35-201ENST00000526425 TNRQ92752 1358 aa12.65□□□□□ -0.38
USP35-201ENST00000526425 C20orf194Q5TEA3 1177 aa12.65□□□□□ -0.38
USP35-201ENST00000526425 FAM43AQ8N2R8 423 aa12.65□□□□□ -0.38
USP35-201ENST00000526425 C14orf37Q86TY3 774 aa12.65□□□□□ -0.39
USP35-201ENST00000526425 TXNDC2Q86VQ3 553 aa12.65□□□□□ -0.39
USP35-201ENST00000526425 ZBTB7CA1YPR0 619 aa12.64□□□□□ -0.39
USP35-201ENST00000526425 RICTORQ6R327 1708 aa12.64□□□□□ -0.39
USP35-201ENST00000526425 KIF1BO60333 1816 aa12.63□□□□□ -0.39
USP35-201ENST00000526425 MYOM2P54296 1465 aa12.63□□□□□ -0.39
USP35-201ENST00000526425 TRPM1Q7Z4N2 1603 aa12.63□□□□□ -0.39
USP35-201ENST00000526425 CGNL1Q0VF96 1302 aa12.63□□□□□ -0.39
USP35-201ENST00000526425 ZMYM4Q5VZL5 1548 aa12.63□□□□□ -0.39
USP35-201ENST00000526425 HDGFL2Q7Z4V5 671 aaPredicted RBP12.62□□□□□ -0.39
USP35-201ENST00000526425 CARD14Q9BXL6 1004 aa12.62□□□□□ -0.39
USP35-201ENST00000526425 TERF2IPQ9NYB0 399 aa12.62□□□□□ -0.39
USP35-201ENST00000526425 BCAR3O75815 825 aa12.62□□□□□ -0.39
USP35-201ENST00000526425 FBLN1P23142 703 aa12.62□□□□□ -0.39
USP35-201ENST00000526425 PARD3Q8TEW0 1356 aa12.62□□□□□ -0.39
USP35-201ENST00000526425 WAPLQ7Z5K2 1190 aa12.61□□□□□ -0.39
USP35-201ENST00000526425 ERVK-7P63135 1459 aa12.61□□□□□ -0.39
USP35-201ENST00000526425 VGLL3A8MV65 326 aa12.61□□□□□ -0.39
USP35-201ENST00000526425 CAMSAP1Q5T5Y3 1602 aa12.61□□□□□ -0.39
USP35-201ENST00000526425 COG6Q9Y2V7 657 aa12.6□□□□□ -0.39
USP35-201ENST00000526425 NSD3Q9BZ95 1437 aa12.6□□□□□ -0.39
USP35-201ENST00000526425 RIMS2Q9UQ26 1411 aa12.6□□□□□ -0.39
USP35-201ENST00000526425 HAP1P54257 671 aaPredicted RBP12.6□□□□□ -0.39
USP35-201ENST00000526425 THEMISQ8N1K5 641 aaPredicted RBP12.6□□□□□ -0.39
USP35-201ENST00000526425 SLC26A8Q96RN1 970 aa12.6□□□□□ -0.39
USP35-201ENST00000526425 FTSJ3Q8IY81 847 aaKnown RBP12.59□□□□□ -0.39
USP35-201ENST00000526425 TCP11L2Q8N4U5 519 aa12.59□□□□□ -0.39
USP35-201ENST00000526425 MADDQ8WXG6 1647 aa12.59□□□□□ -0.39
USP35-201ENST00000526425 PIK3C2GO75747 1445 aa12.59□□□□□ -0.39
USP35-201ENST00000526425 ADGRB3O60242 1522 aa12.59□□□□□ -0.39
USP35-201ENST00000526425 NFKBIBQ15653 356 aa12.59□□□□□ -0.39
USP35-201ENST00000526425 RRAGDQ9NQL2 400 aaPredicted RBP12.59□□□□□ -0.39
USP35-201ENST00000526425 ELL2O00472 640 aaPredicted RBP12.58□□□□□ -0.39
USP35-201ENST00000526425 DNAJC5Q9H3Z4 198 aa12.58□□□□□ -0.39
USP35-201ENST00000526425 CABP1Q9NZU7 370 aa12.58□□□□□ -0.39
USP35-201ENST00000526425 TCERG1O14776 1098 aaKnown RBP12.58□□□□□ -0.4
USP35-201ENST00000526425 PANK1Q8TE04 598 aa12.58□□□□□ -0.4
USP35-201ENST00000526425 PRDM10Q9NQV6 1147 aa12.58□□□□□ -0.4
USP35-201ENST00000526425 AGLP35573 1532 aa12.58□□□□□ -0.4
USP35-201ENST00000526425 HMOX1P09601 288 aa12.57□□□□□ -0.4
USP35-201ENST00000526425 CDK19Q9BWU1 502 aa12.56□□□□□ -0.4
USP35-201ENST00000526425 ARHGEF40Q8TER5 1519 aa12.56□□□□□ -0.4
USP35-201ENST00000526425 E9PSI1 815 aa12.55□□□□□ -0.4
USP35-201ENST00000526425 TSR2Q969E8 191 aaKnown RBP12.55□□□□□ -0.4
USP35-201ENST00000526425 SPINK5Q9NQ38 1064 aaPredicted RBP12.55□□□□□ -0.4
USP35-201ENST00000526425 PDE4AP27815 886 aa12.54□□□□□ -0.4
USP35-201ENST00000526425 LRPPRCP42704 1394 aaKnown RBP12.54□□□□□ -0.4
USP35-201ENST00000526425 PLEKHH1Q9ULM0 1364 aa12.54□□□□□ -0.4
USP35-201ENST00000526425 YTHDC2Q9H6S0 1430 aaKnown RBP12.54□□□□□ -0.4
USP35-201ENST00000526425 RUNDC1Q96C34 613 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms