RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 PNPLA6Q8IY17 1366 aa13.96□□□□□ -0.18
SF3B2-204ENST00000525207 KIF1AQ12756 1690 aa13.95□□□□□ -0.18
SF3B2-204ENST00000525207 COL22A1Q8NFW1 1626 aaPredicted RBP13.95□□□□□ -0.18
SF3B2-204ENST00000525207 PLEKHH1Q9ULM0 1364 aa13.95□□□□□ -0.18
SF3B2-204ENST00000525207 DLC1Q96QB1 1528 aa13.95□□□□□ -0.18
SF3B2-204ENST00000525207 ADGRB2O60241 1585 aa13.94□□□□□ -0.18
SF3B2-204ENST00000525207 POTEAQ6S8J7 498 aa13.94□□□□□ -0.18
SF3B2-204ENST00000525207 HRCP23327 699 aa13.93□□□□□ -0.18
SF3B2-204ENST00000525207 TMEM132EQ6IEE7 984 aa13.93□□□□□ -0.18
SF3B2-204ENST00000525207 DDX17Q92841 729 aaKnown RBP13.93□□□□□ -0.18
SF3B2-204ENST00000525207 PXDNQ92626 1479 aa13.93□□□□□ -0.18
SF3B2-204ENST00000525207 C14orf93Q9H972 538 aaKnown RBP13.92□□□□□ -0.18
SF3B2-204ENST00000525207 STK26Q9P289 416 aa13.92□□□□□ -0.18
SF3B2-204ENST00000525207 SOS2Q07890 1332 aaPredicted RBP13.91□□□□□ -0.18
SF3B2-204ENST00000525207 MEX3CQ5U5Q3 659 aaKnown RBP13.91□□□□□ -0.18
SF3B2-204ENST00000525207 LRRC59Q96AG4 307 aaKnown RBP13.91□□□□□ -0.18
SF3B2-204ENST00000525207 ORAI2Q96SN7 254 aa13.91□□□□□ -0.18
SF3B2-204ENST00000525207 RGPD8O14715 1765 aaPredicted RBP13.91□□□□□ -0.18
SF3B2-204ENST00000525207 ARHGEF28Q8N1W1 1705 aaKnown RBP13.9□□□□□ -0.18
SF3B2-204ENST00000525207 WAPLQ7Z5K2 1190 aa13.9□□□□□ -0.18
SF3B2-204ENST00000525207 DHX57Q6P158 1386 aaKnown RBP13.9□□□□□ -0.18
SF3B2-204ENST00000525207 MARF1Q9Y4F3 1742 aaKnown RBP13.9□□□□□ -0.18
SF3B2-204ENST00000525207 CFAP70Q5T0N1 1121 aa13.89□□□□□ -0.19
SF3B2-204ENST00000525207 USP32Q8NFA0 1604 aa13.89□□□□□ -0.19
SF3B2-204ENST00000525207 NPHP3Q7Z494 1330 aa13.88□□□□□ -0.19
SF3B2-204ENST00000525207 KIAA1210Q9ULL0 1709 aa13.87□□□□□ -0.19
SF3B2-204ENST00000525207 NUTM2BA6NNL0 878 aaPredicted RBP13.87□□□□□ -0.19
SF3B2-204ENST00000525207 NUTM2EB1AL46 878 aaPredicted RBP13.87□□□□□ -0.19
SF3B2-204ENST00000525207 ZNF772Q68DY9 489 aaPredicted RBP13.87□□□□□ -0.19
SF3B2-204ENST00000525207 NUTM2AQ8IVF1 878 aaPredicted RBP13.87□□□□□ -0.19
SF3B2-204ENST00000525207 SIRT1Q96EB6 747 aa13.87□□□□□ -0.19
SF3B2-204ENST00000525207 CDK12Q9NYV4 1490 aaPredicted RBP13.86□□□□□ -0.19
SF3B2-204ENST00000525207 ABCA3Q99758 1704 aa13.85□□□□□ -0.19
SF3B2-204ENST00000525207 ESCO1Q5FWF5 840 aa13.85□□□□□ -0.19
SF3B2-204ENST00000525207 AFF2P51816 1311 aa13.85□□□□□ -0.19
SF3B2-204ENST00000525207 ANKARQ7Z5J8 1434 aa13.84□□□□□ -0.19
SF3B2-204ENST00000525207 NUTM2FA1L443 756 aa13.83□□□□□ -0.2
SF3B2-204ENST00000525207 DCAF11Q8TEB1 546 aa13.83□□□□□ -0.2
SF3B2-204ENST00000525207 STAC3Q96MF2 364 aa13.83□□□□□ -0.2
SF3B2-204ENST00000525207 PRAM1Q96QH2 718 aa13.83□□□□□ -0.2
SF3B2-204ENST00000525207 TULP4Q9NRJ4 1543 aa13.83□□□□□ -0.2
SF3B2-204ENST00000525207 ITSN1Q15811 1721 aa13.82□□□□□ -0.2
SF3B2-204ENST00000525207 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.82□□□□□ -0.2
SF3B2-204ENST00000525207 TRPM3Q9HCF6 1732 aaPredicted RBP13.81□□□□□ -0.2
SF3B2-204ENST00000525207 FOXO3O43524 673 aa13.81□□□□□ -0.2
SF3B2-204ENST00000525207 C8orf37Q96NL8 207 aa13.81□□□□□ -0.2
SF3B2-204ENST00000525207 TNS3Q68CZ2 1445 aa13.81□□□□□ -0.2
SF3B2-204ENST00000525207 XPCQ01831 940 aaPredicted RBP13.8□□□□□ -0.2
SF3B2-204ENST00000525207 SAFB2Q14151 953 aaKnown RBP eCLIP13.8□□□□□ -0.2
SF3B2-204ENST00000525207 KDM2AQ9Y2K7 1162 aa13.8□□□□□ -0.2
SF3B2-204ENST00000525207 RGS12O14924 1447 aa13.8□□□□□ -0.2
SF3B2-204ENST00000525207 TOPAZ1Q8N9V7 1692 aa13.79□□□□□ -0.2
SF3B2-204ENST00000525207 EIF3AQ14152 1382 aaKnown RBP13.79□□□□□ -0.2
SF3B2-204ENST00000525207 ALS2Q96Q42 1657 aa13.79□□□□□ -0.2
SF3B2-204ENST00000525207 ADAMTS2O95450 1211 aa13.78□□□□□ -0.2
SF3B2-204ENST00000525207 POGKQ9P215 609 aa13.78□□□□□ -0.2
SF3B2-204ENST00000525207 TRAK1Q9UPV9 953 aa13.78□□□□□ -0.2
SF3B2-204ENST00000525207 ATP7BP35670 1465 aa13.78□□□□□ -0.2
SF3B2-204ENST00000525207 RXRBP28702 533 aa13.77□□□□□ -0.21
SF3B2-204ENST00000525207 PLCH1Q4KWH8 1693 aa13.77□□□□□ -0.21
SF3B2-204ENST00000525207 SPATA31A3Q5VYP0 1347 aa13.77□□□□□ -0.21
SF3B2-204ENST00000525207 PHF8Q9UPP1 1060 aa13.77□□□□□ -0.21
SF3B2-204ENST00000525207 CRYBG1Q9Y4K1 1723 aa13.77□□□□□ -0.21
SF3B2-204ENST00000525207 SBNO1A3KN83 1393 aa13.76□□□□□ -0.21
SF3B2-204ENST00000525207 ATRNO75882 1429 aa13.75□□□□□ -0.21
SF3B2-204ENST00000525207 MINK1Q8N4C8 1332 aaPredicted RBP13.75□□□□□ -0.21
SF3B2-204ENST00000525207 NGLY1Q96IV0 654 aa13.75□□□□□ -0.21
SF3B2-204ENST00000525207 NWD2Q9ULI1 1742 aa13.75□□□□□ -0.21
SF3B2-204ENST00000525207 QRICH2Q9H0J4 1663 aa13.75□□□□□ -0.21
SF3B2-204ENST00000525207 TRPM1Q7Z4N2 1603 aa13.75□□□□□ -0.21
SF3B2-204ENST00000525207 PRR36Q9H6K5 1346 aa13.74□□□□□ -0.21
SF3B2-204ENST00000525207 FNBP4Q8N3X1 1017 aaPredicted RBP13.74□□□□□ -0.21
SF3B2-204ENST00000525207 HIRIP3Q9BW71 556 aaPredicted RBP13.74□□□□□ -0.21
SF3B2-204ENST00000525207 SLIT2O94813 1529 aa13.74□□□□□ -0.21
SF3B2-204ENST00000525207 BCL9LQ86UU0 1499 aa13.74□□□□□ -0.21
SF3B2-204ENST00000525207 ARHGEF10O15013 1369 aa13.73□□□□□ -0.21
SF3B2-204ENST00000525207 RBM6P78332 1123 aaKnown RBP13.73□□□□□ -0.21
SF3B2-204ENST00000525207 KRT28Q7Z3Y7 464 aa13.73□□□□□ -0.21
SF3B2-204ENST00000525207 WASLO00401 505 aaPredicted RBP13.72□□□□□ -0.21
SF3B2-204ENST00000525207 QTRT2Q9H974 415 aaKnown RBP13.72□□□□□ -0.21
SF3B2-204ENST00000525207 USP21Q9UK80 565 aa13.72□□□□□ -0.21
SF3B2-204ENST00000525207 NRAPQ86VF7 1730 aa13.72□□□□□ -0.21
SF3B2-204ENST00000525207 GLI3P10071 1580 aa13.71□□□□□ -0.22
SF3B2-204ENST00000525207 PSME1Q06323 249 aa13.7□□□□□ -0.22
SF3B2-204ENST00000525207 PMFBP1Q8TBY8 1022 aa13.7□□□□□ -0.22
SF3B2-204ENST00000525207 TRPC5Q9UL62 973 aaPredicted RBP13.7□□□□□ -0.22
SF3B2-204ENST00000525207 PHRF1Q9P1Y6 1649 aaKnown RBP13.7□□□□□ -0.22
SF3B2-204ENST00000525207 GPRASP1Q5JY77 1395 aa13.69□□□□□ -0.22
SF3B2-204ENST00000525207 UPF1Q92900 1129 aaKnown RBP eCLIP13.68□□□□□ -0.22
SF3B2-204ENST00000525207 COL14A1Q05707 1796 aaKnown RBP13.68□□□□□ -0.22
SF3B2-204ENST00000525207 NBPF1Q3BBV0 1214 aa13.67□□□□□ -0.22
SF3B2-204ENST00000525207 RALGAPBQ86X10 1494 aa13.67□□□□□ -0.22
SF3B2-204ENST00000525207 POLR3AO14802 1390 aaPredicted RBP13.66□□□□□ -0.22
SF3B2-204ENST00000525207 CABLES1Q8TDN4 633 aa13.65□□□□□ -0.22
SF3B2-204ENST00000525207 L3MBTL2Q969R5 705 aa13.65□□□□□ -0.22
SF3B2-204ENST00000525207 BRWD3Q6RI45 1802 aa13.64□□□□□ -0.23
SF3B2-204ENST00000525207 NRKQ7Z2Y5 1582 aa13.64□□□□□ -0.23
SF3B2-204ENST00000525207 ATAD2Q6PL18 1390 aa13.64□□□□□ -0.23
SF3B2-204ENST00000525207 HAP1P54257 671 aaPredicted RBP13.64□□□□□ -0.23
SF3B2-204ENST00000525207 LMOD2Q6P5Q4 547 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms