RNA–Protein interactions for RNA: ENST00000524627.5

SF3B2-203, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-203ENST00000524627 TRPC5Q9UL62 973 aaPredicted RBP19.16■□□□□ 0.66
SF3B2-203ENST00000524627 CDC42BPGQ6DT37 1551 aa19.15■□□□□ 0.66
SF3B2-203ENST00000524627 COL22A1Q8NFW1 1626 aaPredicted RBP19.15■□□□□ 0.66
SF3B2-203ENST00000524627 NPHP3Q7Z494 1330 aa19.15■□□□□ 0.66
SF3B2-203ENST00000524627 SRCAPQ6ZRS2 3230 aa19.15■□□□□ 0.66
SF3B2-203ENST00000524627 FNBP4Q8N3X1 1017 aaPredicted RBP19.14■□□□□ 0.65
SF3B2-203ENST00000524627 ADGRF5Q8IZF2 1346 aa19.14■□□□□ 0.65
SF3B2-203ENST00000524627 ATAD2Q6PL18 1390 aa19.14■□□□□ 0.65
SF3B2-203ENST00000524627 XPCQ01831 940 aaPredicted RBP19.13■□□□□ 0.65
SF3B2-203ENST00000524627 RGL3Q3MIN7 710 aa19.13■□□□□ 0.65
SF3B2-203ENST00000524627 STK26Q9P289 416 aa19.13■□□□□ 0.65
SF3B2-203ENST00000524627 MYOM2P54296 1465 aa19.13■□□□□ 0.65
SF3B2-203ENST00000524627 PXDNQ92626 1479 aa19.12■□□□□ 0.65
SF3B2-203ENST00000524627 ATRNO75882 1429 aa19.12■□□□□ 0.65
SF3B2-203ENST00000524627 NUTM2FA1L443 756 aa19.12■□□□□ 0.65
SF3B2-203ENST00000524627 FOXO3O43524 673 aa19.12■□□□□ 0.65
SF3B2-203ENST00000524627 CCDC144AA2RUR9 1427 aa19.11■□□□□ 0.65
SF3B2-203ENST00000524627 WAPLQ7Z5K2 1190 aa19.11■□□□□ 0.65
SF3B2-203ENST00000524627 EP400Q96L91 3159 aa19.1■□□□□ 0.65
SF3B2-203ENST00000524627 TECPR2O15040 1411 aa19.08■□□□□ 0.65
SF3B2-203ENST00000524627 SPATA31E1Q6ZUB1 1445 aa19.08■□□□□ 0.65
SF3B2-203ENST00000524627 LRPPRCP42704 1394 aaKnown RBP19.08■□□□□ 0.65
SF3B2-203ENST00000524627 TMEM132EQ6IEE7 984 aa19.08■□□□□ 0.64
SF3B2-203ENST00000524627 ANKRD30BQ9BXX2 1392 aa19.07■□□□□ 0.64
SF3B2-203ENST00000524627 PLEKHH1Q9ULM0 1364 aa19.07■□□□□ 0.64
SF3B2-203ENST00000524627 MARF1Q9Y4F3 1742 aaKnown RBP19.07■□□□□ 0.64
SF3B2-203ENST00000524627 BCL9LQ86UU0 1499 aa19.07■□□□□ 0.64
SF3B2-203ENST00000524627 IFT172Q9UG01 1749 aa19.06■□□□□ 0.64
SF3B2-203ENST00000524627 ABCC11Q96J66 1382 aa19.06■□□□□ 0.64
SF3B2-203ENST00000524627 KNDC1Q76NI1 1749 aa19.05■□□□□ 0.64
SF3B2-203ENST00000524627 PIK3C2GO75747 1445 aa19.04■□□□□ 0.64
SF3B2-203ENST00000524627 MPHOSPH9Q99550 1183 aa19.04■□□□□ 0.64
SF3B2-203ENST00000524627 FMN2Q9NZ56 1722 aa19.03■□□□□ 0.64
SF3B2-203ENST00000524627 YTHDC2Q9H6S0 1430 aaKnown RBP19.02■□□□□ 0.64
SF3B2-203ENST00000524627 GJD4Q96KN9 370 aaPredicted RBP19.02■□□□□ 0.64
SF3B2-203ENST00000524627 KIF1AQ12756 1690 aa19.01■□□□□ 0.63
SF3B2-203ENST00000524627 SPATA31A3Q5VYP0 1347 aa19■□□□□ 0.63
SF3B2-203ENST00000524627 KRT28Q7Z3Y7 464 aa18.99■□□□□ 0.63
SF3B2-203ENST00000524627 UNC5CLQ8IV45 518 aa18.99■□□□□ 0.63
SF3B2-203ENST00000524627 ZRANB1Q9UGI0 708 aa18.99■□□□□ 0.63
SF3B2-203ENST00000524627 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.99■□□□□ 0.63
SF3B2-203ENST00000524627 SLIT2O94813 1529 aa18.98■□□□□ 0.63
SF3B2-203ENST00000524627 RALGAPBQ86X10 1494 aa18.97■□□□□ 0.63
SF3B2-203ENST00000524627 CCDC125Q86Z20 511 aa18.97■□□□□ 0.63
SF3B2-203ENST00000524627 USP32Q8NFA0 1604 aa18.96■□□□□ 0.63
SF3B2-203ENST00000524627 PLEKHG5O94827 1062 aa18.96■□□□□ 0.63
SF3B2-203ENST00000524627 GLI3P10071 1580 aa18.96■□□□□ 0.63
SF3B2-203ENST00000524627 RGPD8O14715 1765 aaPredicted RBP18.96■□□□□ 0.63
SF3B2-203ENST00000524627 HAP1P54257 671 aaPredicted RBP18.95■□□□□ 0.62
SF3B2-203ENST00000524627 C14orf93Q9H972 538 aaKnown RBP18.95■□□□□ 0.62
SF3B2-203ENST00000524627 PHF8Q9UPP1 1060 aa18.95■□□□□ 0.62
SF3B2-203ENST00000524627 TNS3Q68CZ2 1445 aa18.94■□□□□ 0.62
SF3B2-203ENST00000524627 SAFB2Q14151 953 aaKnown RBP eCLIP18.94■□□□□ 0.62
SF3B2-203ENST00000524627 CFAP70Q5T0N1 1121 aa18.94■□□□□ 0.62
SF3B2-203ENST00000524627 SIRT1Q96EB6 747 aa18.94■□□□□ 0.62
SF3B2-203ENST00000524627 DHX57Q6P158 1386 aaKnown RBP18.93■□□□□ 0.62
SF3B2-203ENST00000524627 PSME1Q06323 249 aa18.93■□□□□ 0.62
SF3B2-203ENST00000524627 CABLES1Q8TDN4 633 aa18.93■□□□□ 0.62
SF3B2-203ENST00000524627 NRXN1Q9ULB1 1477 aa18.92■□□□□ 0.62
SF3B2-203ENST00000524627 LMOD2Q6P5Q4 547 aa18.92■□□□□ 0.62
SF3B2-203ENST00000524627 PRAM1Q96QH2 718 aa18.92■□□□□ 0.62
SF3B2-203ENST00000524627 BRWD3Q6RI45 1802 aa18.9■□□□□ 0.62
SF3B2-203ENST00000524627 BLMP54132 1417 aaPredicted RBP18.9■□□□□ 0.62
SF3B2-203ENST00000524627 SEPT12Q8IYM1 358 aa18.89■□□□□ 0.61
SF3B2-203ENST00000524627 CCDC9Q9Y3X0 531 aaKnown RBP18.89■□□□□ 0.61
SF3B2-203ENST00000524627 SBNO1A3KN83 1393 aa18.89■□□□□ 0.61
SF3B2-203ENST00000524627 PLCH1Q4KWH8 1693 aa18.89■□□□□ 0.61
SF3B2-203ENST00000524627 VPS72Q15906 364 aa18.88■□□□□ 0.61
SF3B2-203ENST00000524627 PMFBP1Q8TBY8 1022 aa18.88■□□□□ 0.61
SF3B2-203ENST00000524627 POGKQ9P215 609 aa18.88■□□□□ 0.61
SF3B2-203ENST00000524627 ARHGEF10O15013 1369 aa18.88■□□□□ 0.61
SF3B2-203ENST00000524627 ABCA3Q99758 1704 aa18.88■□□□□ 0.61
SF3B2-203ENST00000524627 NWD2Q9ULI1 1742 aa18.86■□□□□ 0.61
SF3B2-203ENST00000524627 DEFB132Q7Z7B7 95 aa18.86■□□□□ 0.61
SF3B2-203ENST00000524627 SF3B2Q13435 895 aaKnown RBP18.85■□□□□ 0.61
SF3B2-203ENST00000524627 DLC1Q96QB1 1528 aa18.84■□□□□ 0.61
SF3B2-203ENST00000524627 ANKARQ7Z5J8 1434 aa18.84■□□□□ 0.61
SF3B2-203ENST00000524627 ACIN1Q9UKV3 1341 aaKnown RBP18.84■□□□□ 0.61
SF3B2-203ENST00000524627 FAM83GA6ND36 823 aa18.83■□□□□ 0.6
SF3B2-203ENST00000524627 HIRIP3Q9BW71 556 aaPredicted RBP18.83■□□□□ 0.6
SF3B2-203ENST00000524627 ADGRB2O60241 1585 aa18.83■□□□□ 0.6
SF3B2-203ENST00000524627 A0A0G2JS52 829 aa18.82■□□□□ 0.6
SF3B2-203ENST00000524627 MYT1Q01538 1121 aa18.82■□□□□ 0.6
SF3B2-203ENST00000524627 KRT27Q7Z3Y8 459 aa18.82■□□□□ 0.6
SF3B2-203ENST00000524627 TRAK1Q9UPV9 953 aa18.82■□□□□ 0.6
SF3B2-203ENST00000524627 ONECUT3O60422 494 aaPredicted RBP18.81■□□□□ 0.6
SF3B2-203ENST00000524627 ADGRB1O14514 1584 aa18.81■□□□□ 0.6
SF3B2-203ENST00000524627 TRPM3Q9HCF6 1732 aaPredicted RBP18.8■□□□□ 0.6
SF3B2-203ENST00000524627 MINK1Q8N4C8 1332 aaPredicted RBP18.8■□□□□ 0.6
SF3B2-203ENST00000524627 BTG4Q9NY30 223 aa18.79■□□□□ 0.6
SF3B2-203ENST00000524627 NRAPQ86VF7 1730 aa18.79■□□□□ 0.6
SF3B2-203ENST00000524627 GPRASP1Q5JY77 1395 aa18.79■□□□□ 0.6
SF3B2-203ENST00000524627 RAB3GAP2Q9H2M9 1393 aa18.79■□□□□ 0.6
SF3B2-203ENST00000524627 PRR36Q9H6K5 1346 aa18.78■□□□□ 0.6
SF3B2-203ENST00000524627 FAM98CQ17RN3 349 aaKnown RBP18.78■□□□□ 0.6
SF3B2-203ENST00000524627 KDM2AQ9Y2K7 1162 aa18.78■□□□□ 0.6
SF3B2-203ENST00000524627 ALS2Q96Q42 1657 aa18.77■□□□□ 0.6
SF3B2-203ENST00000524627 EIF3AQ14152 1382 aaKnown RBP18.77■□□□□ 0.6
SF3B2-203ENST00000524627 TULP4Q9NRJ4 1543 aa18.76■□□□□ 0.59
SF3B2-203ENST00000524627 DCAF11Q8TEB1 546 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms