RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 XPCQ01831 940 aaPredicted RBP38.92■■■■□ 3.82
PVT1-219ENST00000523427 TRPC5Q9UL62 973 aaPredicted RBP38.9■■■■□ 3.82
PVT1-219ENST00000523427 ADGRF5Q8IZF2 1346 aa38.89■■■■□ 3.82
PVT1-219ENST00000523427 LAMC1P11047 1609 aa38.89■■■■□ 3.82
PVT1-219ENST00000523427 PPLO60437 1756 aa38.88■■■■□ 3.81
PVT1-219ENST00000523427 FOXO3O43524 673 aa38.87■■■■□ 3.81
PVT1-219ENST00000523427 WAPLQ7Z5K2 1190 aa38.87■■■■□ 3.81
PVT1-219ENST00000523427 NPHP3Q7Z494 1330 aa38.87■■■■□ 3.81
PVT1-219ENST00000523427 PRAG1Q86YV5 1406 aa38.86■■■■□ 3.81
PVT1-219ENST00000523427 FNBP4Q8N3X1 1017 aaPredicted RBP38.84■■■■□ 3.81
PVT1-219ENST00000523427 TMEM132EQ6IEE7 984 aa38.81■■■■□ 3.8
PVT1-219ENST00000523427 ATAD2Q6PL18 1390 aa38.81■■■■□ 3.8
PVT1-219ENST00000523427 CCDC144AA2RUR9 1427 aa38.8■■■■□ 3.8
PVT1-219ENST00000523427 CDC42BPGQ6DT37 1551 aa38.76■■■■□ 3.8
PVT1-219ENST00000523427 ATRNO75882 1429 aa38.75■■■■□ 3.79
PVT1-219ENST00000523427 MYOM2P54296 1465 aa38.74■■■■□ 3.79
PVT1-219ENST00000523427 PXDNQ92626 1479 aa38.73■■■■□ 3.79
PVT1-219ENST00000523427 PLEKHH1Q9ULM0 1364 aa38.73■■■■□ 3.79
PVT1-219ENST00000523427 COL22A1Q8NFW1 1626 aaPredicted RBP38.73■■■■□ 3.79
PVT1-219ENST00000523427 MPHOSPH9Q99550 1183 aa38.72■■■■□ 3.79
PVT1-219ENST00000523427 LRPPRCP42704 1394 aaKnown RBP38.71■■■■□ 3.79
PVT1-219ENST00000523427 ANKRD30BQ9BXX2 1392 aa38.69■■■■□ 3.78
PVT1-219ENST00000523427 SPATA31E1Q6ZUB1 1445 aa38.68■■■■□ 3.78
PVT1-219ENST00000523427 BCL9LQ86UU0 1499 aa38.67■■■■□ 3.78
PVT1-219ENST00000523427 PLEKHG5O94827 1062 aa38.66■■■■□ 3.78
PVT1-219ENST00000523427 ABCC11Q96J66 1382 aa38.65■■■■□ 3.78
PVT1-219ENST00000523427 TECPR2O15040 1411 aa38.64■■■■□ 3.78
PVT1-219ENST00000523427 GJD4Q96KN9 370 aaPredicted RBP38.64■■■■□ 3.78
PVT1-219ENST00000523427 KRT28Q7Z3Y7 464 aa38.6■■■■□ 3.77
PVT1-219ENST00000523427 YTHDC2Q9H6S0 1430 aaKnown RBP38.59■■■■□ 3.77
PVT1-219ENST00000523427 PIK3C2GO75747 1445 aa38.58■■■■□ 3.77
PVT1-219ENST00000523427 SPATA31A3Q5VYP0 1347 aa38.58■■■■□ 3.77
PVT1-219ENST00000523427 HAP1P54257 671 aaPredicted RBP38.57■■■■□ 3.76
PVT1-219ENST00000523427 ZRANB1Q9UGI0 708 aa38.56■■■■□ 3.76
PVT1-219ENST00000523427 IFT172Q9UG01 1749 aa38.55■■■■□ 3.76
PVT1-219ENST00000523427 MARF1Q9Y4F3 1742 aaKnown RBP38.55■■■■□ 3.76
PVT1-219ENST00000523427 SAFB2Q14151 953 aaKnown RBP eCLIP38.55■■■■□ 3.76
PVT1-219ENST00000523427 UNC5CLQ8IV45 518 aa38.55■■■■□ 3.76
PVT1-219ENST00000523427 CFAP70Q5T0N1 1121 aa38.52■■■■□ 3.76
PVT1-219ENST00000523427 LMOD2Q6P5Q4 547 aa38.52■■■■□ 3.76
PVT1-219ENST00000523427 CABLES1Q8TDN4 633 aa38.52■■■■□ 3.76
PVT1-219ENST00000523427 FMN2Q9NZ56 1722 aa38.52■■■■□ 3.76
PVT1-219ENST00000523427 PHF8Q9UPP1 1060 aa38.51■■■■□ 3.76
PVT1-219ENST00000523427 KNDC1Q76NI1 1749 aa38.51■■■■□ 3.76
PVT1-219ENST00000523427 C14orf93Q9H972 538 aaKnown RBP38.5■■■■□ 3.75
PVT1-219ENST00000523427 SRCAPQ6ZRS2 3230 aa38.49■■■■□ 3.75
PVT1-219ENST00000523427 CCDC125Q86Z20 511 aa38.48■■■■□ 3.75
PVT1-219ENST00000523427 RALGAPBQ86X10 1494 aa38.47■■■■□ 3.75
PVT1-219ENST00000523427 PSME1Q06323 249 aa38.46■■■■□ 3.75
PVT1-219ENST00000523427 DHX57Q6P158 1386 aaKnown RBP38.45■■■■□ 3.75
PVT1-219ENST00000523427 SIRT1Q96EB6 747 aa38.45■■■■□ 3.75
PVT1-219ENST00000523427 PRAM1Q96QH2 718 aa38.45■■■■□ 3.75
PVT1-219ENST00000523427 KIF1AQ12756 1690 aa38.45■■■■□ 3.75
PVT1-219ENST00000523427 EP400Q96L91 3159 aa38.45■■■■□ 3.75
PVT1-219ENST00000523427 SLIT2O94813 1529 aa38.44■■■■□ 3.74
PVT1-219ENST00000523427 CCDC9Q9Y3X0 531 aaKnown RBP38.44■■■■□ 3.74
PVT1-219ENST00000523427 POGKQ9P215 609 aa38.41■■■■□ 3.74
PVT1-219ENST00000523427 GLI3P10071 1580 aa38.4■■■■□ 3.74
PVT1-219ENST00000523427 TNS3Q68CZ2 1445 aa38.4■■■■□ 3.74
PVT1-219ENST00000523427 RGPD8O14715 1765 aaPredicted RBP38.4■■■■□ 3.74
PVT1-219ENST00000523427 PMFBP1Q8TBY8 1022 aa38.39■■■■□ 3.74
PVT1-219ENST00000523427 USP32Q8NFA0 1604 aa38.38■■■■□ 3.74
PVT1-219ENST00000523427 SEPT12Q8IYM1 358 aa38.37■■■■□ 3.73
PVT1-219ENST00000523427 TNKS1BP1Q9C0C2 1729 aaKnown RBP38.37■■■■□ 3.73
PVT1-219ENST00000523427 DEFB132Q7Z7B7 95 aa38.34■■■■□ 3.73
PVT1-219ENST00000523427 VPS72Q15906 364 aa38.33■■■■□ 3.73
PVT1-219ENST00000523427 BLMP54132 1417 aaPredicted RBP38.31■■■■□ 3.72
PVT1-219ENST00000523427 HIRIP3Q9BW71 556 aaPredicted RBP38.31■■■■□ 3.72
PVT1-219ENST00000523427 NRXN1Q9ULB1 1477 aa38.3■■■■□ 3.72
PVT1-219ENST00000523427 A0A0G2JS52 829 aa38.3■■■■□ 3.72
PVT1-219ENST00000523427 MYT1Q01538 1121 aa38.3■■■■□ 3.72
PVT1-219ENST00000523427 SF3B2Q13435 895 aaKnown RBP38.3■■■■□ 3.72
PVT1-219ENST00000523427 SBNO1A3KN83 1393 aa38.3■■■■□ 3.72
PVT1-219ENST00000523427 TRAK1Q9UPV9 953 aa38.29■■■■□ 3.72
PVT1-219ENST00000523427 FAM83GA6ND36 823 aa38.27■■■■□ 3.72
PVT1-219ENST00000523427 ARHGEF10O15013 1369 aa38.27■■■■□ 3.72
PVT1-219ENST00000523427 BRWD3Q6RI45 1802 aa38.26■■■■□ 3.71
PVT1-219ENST00000523427 KDM2AQ9Y2K7 1162 aa38.25■■■■□ 3.71
PVT1-219ENST00000523427 MINK1Q8N4C8 1332 aaPredicted RBP38.24■■■■□ 3.71
PVT1-219ENST00000523427 ACIN1Q9UKV3 1341 aaKnown RBP38.23■■■■□ 3.71
PVT1-219ENST00000523427 KRT27Q7Z3Y8 459 aa38.23■■■■□ 3.71
PVT1-219ENST00000523427 PLCH1Q4KWH8 1693 aa38.21■■■■□ 3.71
PVT1-219ENST00000523427 ANKARQ7Z5J8 1434 aa38.19■■■■□ 3.7
PVT1-219ENST00000523427 ONECUT3O60422 494 aaPredicted RBP38.17■■■■□ 3.7
PVT1-219ENST00000523427 FAM98CQ17RN3 349 aaKnown RBP38.17■■■■□ 3.7
PVT1-219ENST00000523427 BTG4Q9NY30 223 aa38.17■■■■□ 3.7
PVT1-219ENST00000523427 RAB3GAP2Q9H2M9 1393 aa38.17■■■■□ 3.7
PVT1-219ENST00000523427 DLC1Q96QB1 1528 aa38.17■■■■□ 3.7
PVT1-219ENST00000523427 GPRASP1Q5JY77 1395 aa38.16■■■■□ 3.7
PVT1-219ENST00000523427 ABCA3Q99758 1704 aa38.15■■■■□ 3.7
PVT1-219ENST00000523427 NWD2Q9ULI1 1742 aa38.15■■■■□ 3.7
PVT1-219ENST00000523427 DCAF11Q8TEB1 546 aa38.14■■■■□ 3.7
PVT1-219ENST00000523427 PRR36Q9H6K5 1346 aa38.13■■■■□ 3.7
PVT1-219ENST00000523427 PAK3O75914 559 aaPredicted RBP38.12■■■■□ 3.69
PVT1-219ENST00000523427 NGDNQ8NEJ9 315 aaKnown RBP38.11■■■■□ 3.69
PVT1-219ENST00000523427 ADGRB1O14514 1584 aa38.1■■■■□ 3.69
PVT1-219ENST00000523427 WASLO00401 505 aaPredicted RBP38.09■■■■□ 3.69
PVT1-219ENST00000523427 ADGRB2O60241 1585 aa38.07■■■■□ 3.69
PVT1-219ENST00000523427 FAM182BQ5T319 152 aa38.05■■■■□ 3.68
PVT1-219ENST00000523427 EIF3AQ14152 1382 aaKnown RBP38.05■■■■□ 3.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms