RNA–Protein interactions for RNA: ENST00000523339.1

NPM1-210, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 268 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-210ENST00000523339 PLA2R1Q13018 1463 aa6.34□□□□□ -1.4
NPM1-210ENST00000523339 COL9A1P20849 921 aa6.33□□□□□ -1.4
NPM1-210ENST00000523339 MEX3CQ5U5Q3 659 aaKnown RBP6.33□□□□□ -1.4
NPM1-210ENST00000523339 POTEAQ6S8J7 498 aa6.33□□□□□ -1.4
NPM1-210ENST00000523339 ZDHHC16Q969W1 377 aa6.33□□□□□ -1.4
NPM1-210ENST00000523339 STAC3Q96MF2 364 aa6.33□□□□□ -1.4
NPM1-210ENST00000523339 RGS17Q9UGC6 210 aaPredicted RBP6.33□□□□□ -1.4
NPM1-210ENST00000523339 ZNF777Q9ULD5 760 aaPredicted RBP6.33□□□□□ -1.4
NPM1-210ENST00000523339 PCDHGA10Q9Y5H3 936 aa6.33□□□□□ -1.4
NPM1-210ENST00000523339 SHANK2Q9UPX8 1470 aa6.33□□□□□ -1.4
NPM1-210ENST00000523339 PTPREP23469 700 aa6.32□□□□□ -1.4
NPM1-210ENST00000523339 THSD4Q6ZMP0 1018 aa6.32□□□□□ -1.4
NPM1-210ENST00000523339 TRIM52Q96A61 297 aa6.32□□□□□ -1.4
NPM1-210ENST00000523339 CLIP1P30622 1438 aa6.32□□□□□ -1.4
NPM1-210ENST00000523339 AGLP35573 1532 aa6.31□□□□□ -1.4
NPM1-210ENST00000523339 MAP3K9P80192 1104 aa6.31□□□□□ -1.4
NPM1-210ENST00000523339 PROX2Q3B8N5 592 aa6.31□□□□□ -1.4
NPM1-210ENST00000523339 DDX27Q96GQ7 796 aaKnown RBP6.31□□□□□ -1.4
NPM1-210ENST00000523339 DIP2CQ9Y2E4 1556 aa6.31□□□□□ -1.4
NPM1-210ENST00000523339 TCOF1Q13428 1488 aaKnown RBP6.3□□□□□ -1.4
NPM1-210ENST00000523339 THEMISQ8N1K5 641 aaPredicted RBP6.3□□□□□ -1.4
NPM1-210ENST00000523339 CEP170BQ9Y4F5 1589 aaPredicted RBP6.3□□□□□ -1.4
NPM1-210ENST00000523339 SPAG9O60271 1321 aaKnown RBP6.29□□□□□ -1.4
NPM1-210ENST00000523339 PRXQ9BXM0 1461 aa6.29□□□□□ -1.4
NPM1-210ENST00000523339 WNT2BQ93097 391 aa6.29□□□□□ -1.4
NPM1-210ENST00000523339 CDK13Q14004 1512 aaKnown RBP6.29□□□□□ -1.4
NPM1-210ENST00000523339 MLH3Q9UHC1 1453 aa6.28□□□□□ -1.4
NPM1-210ENST00000523339 SUPT6HQ7KZ85 1726 aaKnown RBP6.28□□□□□ -1.4
NPM1-210ENST00000523339 SAMD9Q5K651 1589 aa6.28□□□□□ -1.4
NPM1-210ENST00000523339 RYDENQ9NUL5 291 aaKnown RBP6.28□□□□□ -1.4
NPM1-210ENST00000523339 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.28□□□□□ -1.46e-10■■■□□ 18.9
NPM1-210ENST00000523339 MYO3AQ8NEV4 1616 aa6.28□□□□□ -1.4
NPM1-210ENST00000523339 A2ML1A8K2U0 1454 aa6.28□□□□□ -1.4
NPM1-210ENST00000523339 REREQ9P2R6 1566 aa6.27□□□□□ -1.41
NPM1-210ENST00000523339 NPHP4O75161 1426 aaPredicted RBP6.27□□□□□ -1.41
NPM1-210ENST00000523339 ZNF772Q68DY9 489 aaPredicted RBP6.27□□□□□ -1.41
NPM1-210ENST00000523339 MRPL50Q8N5N7 158 aaKnown RBP6.27□□□□□ -1.41
NPM1-210ENST00000523339 ABCA6Q8N139 1617 aa6.27□□□□□ -1.41
NPM1-210ENST00000523339 KDM5CP41229 1560 aa6.27□□□□□ -1.41
NPM1-210ENST00000523339 KIF14Q15058 1648 aa6.26□□□□□ -1.41
NPM1-210ENST00000523339 MYO5CQ9NQX4 1742 aa6.26□□□□□ -1.41
NPM1-210ENST00000523339 TNRQ92752 1358 aa6.26□□□□□ -1.41
NPM1-210ENST00000523339 FAM135AQ9P2D6 1515 aa6.25□□□□□ -1.41
NPM1-210ENST00000523339 GOLGA8CPA6NN73 597 aa6.25□□□□□ -1.41
NPM1-210ENST00000523339 RXRBP28702 533 aa6.25□□□□□ -1.41
NPM1-210ENST00000523339 IFFO2Q5TF58 517 aa6.25□□□□□ -1.41
NPM1-210ENST00000523339 KIAA1468Q9P260 1216 aa6.25□□□□□ -1.41
NPM1-210ENST00000523339 WASHC2CQ9Y4E1 1318 aa6.25□□□□□ -1.41
NPM1-210ENST00000523339 NUTM2BA6NNL0 878 aaPredicted RBP6.24□□□□□ -1.41
NPM1-210ENST00000523339 NUTM2EB1AL46 878 aaPredicted RBP6.24□□□□□ -1.41
NPM1-210ENST00000523339 PPP1R3GB7ZBB8 358 aa6.24□□□□□ -1.41
NPM1-210ENST00000523339 BCAMP50895 628 aa6.24□□□□□ -1.41
NPM1-210ENST00000523339 HNRNPMP52272 730 aaKnown RBP eCLIP6.24□□□□□ -1.415e-7■■■■■ 31.8
NPM1-210ENST00000523339 CAMK2BQ13554 666 aa6.24□□□□□ -1.41
NPM1-210ENST00000523339 C6orf132Q5T0Z8 1188 aa6.24□□□□□ -1.41
NPM1-210ENST00000523339 NUTM2DQ5VT03 806 aaPredicted RBP6.24□□□□□ -1.41
NPM1-210ENST00000523339 FBXO31Q5XUX0 539 aaPredicted RBP6.24□□□□□ -1.41
NPM1-210ENST00000523339 NUTM2AQ8IVF1 878 aaPredicted RBP6.24□□□□□ -1.41
NPM1-210ENST00000523339 RNF17Q9BXT8 1623 aaKnown RBP6.24□□□□□ -1.41
NPM1-210ENST00000523339 TROQ12816 1431 aaPredicted RBP6.24□□□□□ -1.41
NPM1-210ENST00000523339 MROH2AA6NES4 1674 aa6.23□□□□□ -1.41
NPM1-210ENST00000523339 ZNF142P52746 1687 aaPredicted RBP6.23□□□□□ -1.41
NPM1-210ENST00000523339 CLTCQ00610 1675 aaKnown RBP6.23□□□□□ -1.41
NPM1-210ENST00000523339 SETD1AO15047 1707 aaKnown RBP6.23□□□□□ -1.41
NPM1-210ENST00000523339 SRCAPQ6ZRS2 3230 aa6.23□□□□□ -1.41
NPM1-210ENST00000523339 DPYSL4O14531 572 aa6.23□□□□□ -1.41
NPM1-210ENST00000523339 PHF14O94880 888 aa6.23□□□□□ -1.41
NPM1-210ENST00000523339 UBTFP17480 764 aaKnown RBP6.23□□□□□ -1.41
NPM1-210ENST00000523339 TYW1BQ6NUM6 668 aa6.23□□□□□ -1.41
NPM1-210ENST00000523339 BCANQ96GW7 911 aa6.23□□□□□ -1.41
NPM1-210ENST00000523339 RABGEF1Q9UJ41 708 aa6.23□□□□□ -1.41
NPM1-210ENST00000523339 LRRC7Q96NW7 1537 aa6.23□□□□□ -1.41
NPM1-210ENST00000523339 FMN1Q68DA7 1419 aa6.23□□□□□ -1.41
NPM1-210ENST00000523339 A2MP01023 1474 aa6.22□□□□□ -1.41
NPM1-210ENST00000523339 DNMT1P26358 1616 aaKnown RBP6.22□□□□□ -1.41
NPM1-210ENST00000523339 A0A0G2JS52 829 aa6.22□□□□□ -1.41
NPM1-210ENST00000523339 EID1Q9Y6B2 187 aa6.22□□□□□ -1.41
NPM1-210ENST00000523339 JCADQ9P266 1359 aa6.21□□□□□ -1.41
NPM1-210ENST00000523339 ABCC1P33527 1531 aa6.21□□□□□ -1.42
NPM1-210ENST00000523339 KIF3BO15066 747 aa6.21□□□□□ -1.42
NPM1-210ENST00000523339 PRIM1P49642 420 aaKnown RBP6.21□□□□□ -1.42
NPM1-210ENST00000523339 C14orf37Q86TY3 774 aa6.21□□□□□ -1.42
NPM1-210ENST00000523339 RBM33Q96EV2 1170 aaKnown RBP6.21□□□□□ -1.42
NPM1-210ENST00000523339 CFDP1Q9UEE9 299 aaPredicted RBP6.21□□□□□ -1.42
NPM1-210ENST00000523339 SEPT9Q9UHD8 586 aaPredicted RBP6.21□□□□□ -1.42
NPM1-210ENST00000523339 VWDEQ8N2E2 1590 aa6.21□□□□□ -1.42
NPM1-210ENST00000523339 UGGT1Q9NYU2 1555 aa6.21□□□□□ -1.42
NPM1-210ENST00000523339 FAM135BQ49AJ0 1406 aa6.2□□□□□ -1.42
NPM1-210ENST00000523339 C3orf80F5H4A9 247 aa6.2□□□□□ -1.42
NPM1-210ENST00000523339 PROSER2Q86WR7 435 aaPredicted RBP6.2□□□□□ -1.42
NPM1-210ENST00000523339 DDX12PQ92771 950 aa6.2□□□□□ -1.42
NPM1-210ENST00000523339 ZFRQ96KR1 1074 aaKnown RBP6.2□□□□□ -1.42
NPM1-210ENST00000523339 WBP1LQ9NX94 342 aa6.2□□□□□ -1.42
NPM1-210ENST00000523339 POLR1AO95602 1720 aaPredicted RBP6.19□□□□□ -1.42
NPM1-210ENST00000523339 SYNMO15061 1565 aa6.19□□□□□ -1.42
NPM1-210ENST00000523339 NEURL4Q96JN8 1562 aa6.19□□□□□ -1.42
NPM1-210ENST00000523339 SOWAHBA6NEL2 793 aa6.19□□□□□ -1.42
NPM1-210ENST00000523339 TXNDC2Q86VQ3 553 aa6.19□□□□□ -1.42
NPM1-210ENST00000523339 NBPF3Q9H094 633 aa6.19□□□□□ -1.42
NPM1-210ENST00000523339 SPATA31A6Q5VVP1 1343 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms