RNA–Protein interactions for RNA: ENST00000523094.5

CLINT1-206, Transcript of clathrin interactor 1, humanhuman

TSL 2 BASIC

Gene CLINT1, Length 3,987 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-206ENST00000523094 PLCH2O75038 1416 aa15.75■□□□□ 0.11
CLINT1-206ENST00000523094 ARID3AQ99856 593 aa15.75■□□□□ 0.11
CLINT1-206ENST00000523094 RRP7AQ9Y3A4 280 aaKnown RBP15.75■□□□□ 0.11
CLINT1-206ENST00000523094 ABCC1P33527 1531 aa15.74■□□□□ 0.11
CLINT1-206ENST00000523094 SHPRHQ149N8 1683 aa15.74■□□□□ 0.11
CLINT1-206ENST00000523094 CFAP70Q5T0N1 1121 aa15.74■□□□□ 0.11
CLINT1-206ENST00000523094 RUNDC1Q96C34 613 aa15.74■□□□□ 0.11
CLINT1-206ENST00000523094 EFCAB2Q5VUJ9 269 aa15.74■□□□□ 0.11
CLINT1-206ENST00000523094 NCLP19338 710 aaKnown RBP15.73■□□□□ 0.11
CLINT1-206ENST00000523094 RWDD1Q9H446 243 aaPredicted RBP15.73■□□□□ 0.11
CLINT1-206ENST00000523094 SHROOM2Q13796 1616 aa15.73■□□□□ 0.11
CLINT1-206ENST00000523094 TRHP20396 242 aaPredicted RBP15.73■□□□□ 0.11
CLINT1-206ENST00000523094 IQSEC2Q5JU85 1478 aa15.73■□□□□ 0.11
CLINT1-206ENST00000523094 TCP11L2Q8N4U5 519 aa15.72■□□□□ 0.11
CLINT1-206ENST00000523094 BCL2L13Q9BXK5 485 aa15.72■□□□□ 0.11
CLINT1-206ENST00000523094 ABCA6Q8N139 1617 aa15.72■□□□□ 0.11
CLINT1-206ENST00000523094 TET3O43151 1660 aa15.71■□□□□ 0.11
CLINT1-206ENST00000523094 WDR63Q8IWG1 891 aa15.71■□□□□ 0.11
CLINT1-206ENST00000523094 ZBTB7CA1YPR0 619 aa15.71■□□□□ 0.11
CLINT1-206ENST00000523094 GOLGA6L3A6NEY3 463 aa15.71■□□□□ 0.11
CLINT1-206ENST00000523094 PHF23Q9BUL5 403 aaPredicted RBP15.71■□□□□ 0.11
CLINT1-206ENST00000523094 MAP3K4Q9Y6R4 1608 aa15.71■□□□□ 0.11
CLINT1-206ENST00000523094 SPAG9O60271 1321 aaKnown RBP15.71■□□□□ 0.11
CLINT1-206ENST00000523094 XRCC6P12956 609 aaKnown RBP eCLIP15.7■□□□□ 0.1
CLINT1-206ENST00000523094 MCM4P33991 863 aa15.7■□□□□ 0.1
CLINT1-206ENST00000523094 MORC1Q86VD1 984 aa15.7■□□□□ 0.1
CLINT1-206ENST00000523094 DEPDC5O75140 1603 aa15.7■□□□□ 0.1
CLINT1-206ENST00000523094 FSD2A1L4K1 749 aa15.7■□□□□ 0.1
CLINT1-206ENST00000523094 MYOM2P54296 1465 aa15.7■□□□□ 0.1
CLINT1-206ENST00000523094 ADGRF5Q8IZF2 1346 aa15.69■□□□□ 0.1
CLINT1-206ENST00000523094 NEURL4Q96JN8 1562 aa15.69■□□□□ 0.1
CLINT1-206ENST00000523094 NSD3Q9BZ95 1437 aa15.69■□□□□ 0.1
CLINT1-206ENST00000523094 RTEL1-TNFRSF6BF6WH68 1400 aa15.68■□□□□ 0.1
CLINT1-206ENST00000523094 ZFYVE16Q7Z3T8 1539 aa15.68■□□□□ 0.1
CLINT1-206ENST00000523094 MYO3AQ8NEV4 1616 aa15.67■□□□□ 0.1
CLINT1-206ENST00000523094 MVPQ14764 893 aaKnown RBP15.67■□□□□ 0.1
CLINT1-206ENST00000523094 KANK1Q14678 1352 aa15.67■□□□□ 0.1
CLINT1-206ENST00000523094 CCDC27Q2M243 656 aa15.67■□□□□ 0.1
CLINT1-206ENST00000523094 AFAP1Q8N556 730 aa15.67■□□□□ 0.1
CLINT1-206ENST00000523094 C22orf23Q9BZE7 217 aa15.67■□□□□ 0.1
CLINT1-206ENST00000523094 CHMP5Q9NZZ3 219 aa15.67■□□□□ 0.1
CLINT1-206ENST00000523094 SBNO2Q9Y2G9 1366 aa15.66■□□□□ 0.1
CLINT1-206ENST00000523094 UGGT1Q9NYU2 1555 aa15.65■□□□□ 0.1
CLINT1-206ENST00000523094 CHD1O14646 1710 aa15.65■□□□□ 0.1
CLINT1-206ENST00000523094 MYH16Q9H6N6 1097 aa15.65■□□□□ 0.1
CLINT1-206ENST00000523094 VWDEQ8N2E2 1590 aa15.65■□□□□ 0.1
CLINT1-206ENST00000523094 PANK2Q9BZ23 570 aa15.65■□□□□ 0.1
CLINT1-206ENST00000523094 MFAP1P55081 439 aaKnown RBP15.65■□□□□ 0.1
CLINT1-206ENST00000523094 TRAK2O60296 914 aa15.64■□□□□ 0.09
CLINT1-206ENST00000523094 ZNF518AQ6AHZ1 1483 aa15.64■□□□□ 0.09
CLINT1-206ENST00000523094 ZKSCAN2Q63HK3 967 aa15.64■□□□□ 0.09
CLINT1-206ENST00000523094 ERCC6L2Q5T890 1561 aa15.63■□□□□ 0.09
CLINT1-206ENST00000523094 FTSJ3Q8IY81 847 aaKnown RBP15.63■□□□□ 0.09
CLINT1-206ENST00000523094 DZIP1LQ8IYY4 767 aaKnown RBP15.63■□□□□ 0.09
CLINT1-206ENST00000523094 MTHFSP49914 203 aa15.63■□□□□ 0.09
CLINT1-206ENST00000523094 SLC12A5Q9H2X9 1139 aa15.63■□□□□ 0.09
CLINT1-206ENST00000523094 IFT172Q9UG01 1749 aa15.63■□□□□ 0.09
CLINT1-206ENST00000523094 PNNQ9H307 717 aaKnown RBP15.62■□□□□ 0.09
CLINT1-206ENST00000523094 ZCCHC11Q5TAX3 1644 aaKnown RBP15.62■□□□□ 0.09
CLINT1-206ENST00000523094 CFAP53Q96M91 514 aa15.62■□□□□ 0.09
CLINT1-206ENST00000523094 KIF1BO60333 1816 aa15.61■□□□□ 0.09
CLINT1-206ENST00000523094 CLCN1P35523 988 aa15.61■□□□□ 0.09
CLINT1-206ENST00000523094 NRXN1Q9ULB1 1477 aa15.61■□□□□ 0.09
CLINT1-206ENST00000523094 VSIG10Q8N0Z9 540 aa15.6■□□□□ 0.09
CLINT1-206ENST00000523094 KIF3BO15066 747 aa15.6■□□□□ 0.09
CLINT1-206ENST00000523094 MRE11P49959 708 aa15.6■□□□□ 0.09
CLINT1-206ENST00000523094 NCBP3Q53F19 620 aaKnown RBP15.6■□□□□ 0.09
CLINT1-206ENST00000523094 HSCBQ8IWL3 235 aa15.6■□□□□ 0.09
CLINT1-206ENST00000523094 MROH2AA6NES4 1674 aa15.6■□□□□ 0.09
CLINT1-206ENST00000523094 HDAC1Q13547 482 aaPredicted RBP15.6■□□□□ 0.09
CLINT1-206ENST00000523094 USP32Q8NFA0 1604 aa15.59■□□□□ 0.09
CLINT1-206ENST00000523094 ZNF692Q9BU19 519 aaPredicted RBP15.59■□□□□ 0.09
CLINT1-206ENST00000523094 TRAK1Q9UPV9 953 aa15.58■□□□□ 0.09
CLINT1-206ENST00000523094 ZC3H13Q5T200 1668 aaKnown RBP15.58■□□□□ 0.08
CLINT1-206ENST00000523094 ATP7AQ04656 1500 aa15.58■□□□□ 0.08
CLINT1-206ENST00000523094 SETBP1Q9Y6X0 1596 aa15.58■□□□□ 0.08
CLINT1-206ENST00000523094 DDX11L8A8MPP1 907 aa15.58■□□□□ 0.08
CLINT1-206ENST00000523094 CT47B1P0C2W7 299 aaPredicted RBP15.58■□□□□ 0.08
CLINT1-206ENST00000523094 TSR2Q969E8 191 aaKnown RBP15.58■□□□□ 0.08
CLINT1-206ENST00000523094 SMC4Q9NTJ3 1288 aa15.58■□□□□ 0.08
CLINT1-206ENST00000523094 FOXD4L1Q9NU39 408 aa15.58■□□□□ 0.08
CLINT1-206ENST00000523094 U2AF1L5P0DN76 240 aaPredicted RBP15.57■□□□□ 0.08
CLINT1-206ENST00000523094 U2AF1Q01081 240 aaKnown RBP eCLIP15.57■□□□□ 0.08
CLINT1-206ENST00000523094 QRICH2Q9H0J4 1663 aa15.57■□□□□ 0.08
CLINT1-206ENST00000523094 INO80Q9ULG1 1556 aaPredicted RBP15.57■□□□□ 0.08
CLINT1-206ENST00000523094 ADGRB2O60241 1585 aa15.57■□□□□ 0.08
CLINT1-206ENST00000523094 NOS1P29475 1434 aa15.57■□□□□ 0.08
CLINT1-206ENST00000523094 TRIM27P14373 513 aa15.57■□□□□ 0.08
CLINT1-206ENST00000523094 MROH1Q8NDA8 1641 aa15.56■□□□□ 0.08
CLINT1-206ENST00000523094 GRPEL1Q9HAV7 217 aa15.56■□□□□ 0.08
CLINT1-206ENST00000523094 NCOA3Q9Y6Q9 1424 aa15.56■□□□□ 0.08
CLINT1-206ENST00000523094 ITPRIPQ8IWB1 547 aa15.56■□□□□ 0.08
CLINT1-206ENST00000523094 DDX19BQ9UMR2 479 aa15.56■□□□□ 0.08
CLINT1-206ENST00000523094 ADGRL1O94910 1474 aa15.56■□□□□ 0.08
CLINT1-206ENST00000523094 ARAP3Q8WWN8 1544 aa15.56■□□□□ 0.08
CLINT1-206ENST00000523094 DDIT3P35638 169 aa15.55■□□□□ 0.08
CLINT1-206ENST00000523094 EXOSC9Q06265 439 aaKnown RBP15.55■□□□□ 0.08
CLINT1-206ENST00000523094 SMC5Q8IY18 1101 aa15.55■□□□□ 0.08
CLINT1-206ENST00000523094 EFCAB6Q5THR3 1501 aa15.55■□□□□ 0.08
CLINT1-206ENST00000523094 SSH1Q8WYL5 1049 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms