RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 ANKRD36BQ8N2N9 1353 aa34.56■■■■□ 3.12
COL13A1-214ENST00000522165 DLC1Q96QB1 1528 aa34.55■■■■□ 3.12
COL13A1-214ENST00000522165 WDR43Q15061 677 aaKnown RBP eCLIP34.55■■■■□ 3.12
COL13A1-214ENST00000522165 NRXN3Q9Y4C0 1643 aa34.54■■■■□ 3.12
COL13A1-214ENST00000522165 NINLQ9Y2I6 1382 aa34.54■■■■□ 3.12
COL13A1-214ENST00000522165 PDE3BQ13370 1112 aa34.53■■■■□ 3.12
COL13A1-214ENST00000522165 MINK1Q8N4C8 1332 aaPredicted RBP34.53■■■■□ 3.12
COL13A1-214ENST00000522165 SALL2Q9Y467 1007 aaPredicted RBP34.51■■■■□ 3.12
COL13A1-214ENST00000522165 SRPK2P78362 688 aaKnown RBP34.51■■■■□ 3.11
COL13A1-214ENST00000522165 UBR1Q8IWV7 1749 aa34.5■■■■□ 3.11
COL13A1-214ENST00000522165 CGNL1Q0VF96 1302 aa34.49■■■■□ 3.11
COL13A1-214ENST00000522165 ATAD2Q6PL18 1390 aa34.49■■■■□ 3.11
COL13A1-214ENST00000522165 HDGFP51858 240 aaKnown RBP34.49■■■■□ 3.11
COL13A1-214ENST00000522165 RNF123Q5XPI4 1314 aa34.48■■■■□ 3.11
COL13A1-214ENST00000522165 TRHP20396 242 aaPredicted RBP34.48■■■■□ 3.11
COL13A1-214ENST00000522165 ABCC11Q96J66 1382 aa34.48■■■■□ 3.11
COL13A1-214ENST00000522165 MORC1Q86VD1 984 aa34.47■■■■□ 3.11
COL13A1-214ENST00000522165 TMEM2Q9UHN6 1383 aa34.46■■■■□ 3.11
COL13A1-214ENST00000522165 NSD2O96028 1365 aa34.43■■■■□ 3.1
COL13A1-214ENST00000522165 POLR3AO14802 1390 aaPredicted RBP34.43■■■■□ 3.1
COL13A1-214ENST00000522165 NLRP1Q9C000 1473 aa34.42■■■■□ 3.1
COL13A1-214ENST00000522165 A0A1W2PP64 1363 aa34.41■■■■□ 3.1
COL13A1-214ENST00000522165 METP08581 1390 aa34.41■■■■□ 3.1
COL13A1-214ENST00000522165 CDK19Q9BWU1 502 aa34.4■■■■□ 3.1
COL13A1-214ENST00000522165 WAPLQ7Z5K2 1190 aa34.39■■■■□ 3.1
COL13A1-214ENST00000522165 PLEKHH1Q9ULM0 1364 aa34.39■■■■□ 3.1
COL13A1-214ENST00000522165 CEBPAP49715 358 aaPredicted RBP34.39■■■■□ 3.1
COL13A1-214ENST00000522165 C3P01024 1663 aa34.38■■■■□ 3.09
COL13A1-214ENST00000522165 PPP4R2Q9NY27 417 aa34.37■■■■□ 3.09
COL13A1-214ENST00000522165 CDCA7LQ96GN5 454 aa34.36■■■■□ 3.09
COL13A1-214ENST00000522165 CD163L1Q9NR16 1453 aa34.36■■■■□ 3.09
COL13A1-214ENST00000522165 FER1L4A9Z1Z3 1794 aa34.35■■■■□ 3.09
COL13A1-214ENST00000522165 TERF2IPQ9NYB0 399 aa34.35■■■■□ 3.09
COL13A1-214ENST00000522165 KNDC1Q76NI1 1749 aa34.34■■■■□ 3.09
COL13A1-214ENST00000522165 TNNT2P45379 298 aaPredicted RBP34.33■■■■□ 3.09
COL13A1-214ENST00000522165 TECPR2O15040 1411 aa34.32■■■■□ 3.09
COL13A1-214ENST00000522165 SIRT1Q96EB6 747 aa34.31■■■■□ 3.08
COL13A1-214ENST00000522165 FAM135BQ49AJ0 1406 aa34.3■■■■□ 3.08
COL13A1-214ENST00000522165 RCAN3Q9UKA8 241 aa34.28■■■■□ 3.08
COL13A1-214ENST00000522165 SHPRHQ149N8 1683 aa34.28■■■■□ 3.08
COL13A1-214ENST00000522165 ADAMTS13Q76LX8 1427 aa34.28■■■■□ 3.08
COL13A1-214ENST00000522165 ZNF521Q96K83 1311 aa34.28■■■■□ 3.08
COL13A1-214ENST00000522165 PLEKHG1Q9ULL1 1385 aa34.27■■■■□ 3.08
COL13A1-214ENST00000522165 CPS1P31327 1500 aa34.27■■■■□ 3.08
COL13A1-214ENST00000522165 TXNDC2Q86VQ3 553 aa34.27■■■■□ 3.08
COL13A1-214ENST00000522165 CCDC146Q8IYE0 955 aa34.27■■■■□ 3.08
COL13A1-214ENST00000522165 LTKP29376 864 aa34.26■■■■□ 3.08
COL13A1-214ENST00000522165 HDGFL2Q7Z4V5 671 aaPredicted RBP34.26■■■■□ 3.08
COL13A1-214ENST00000522165 CABP1Q9NZU7 370 aa34.26■■■■□ 3.08
COL13A1-214ENST00000522165 MTHFSP49914 203 aa34.25■■■■□ 3.07
COL13A1-214ENST00000522165 MED14O60244 1454 aa34.23■■■■□ 3.07
COL13A1-214ENST00000522165 ANKRD26Q9UPS8 1709 aa34.22■■■■□ 3.07
COL13A1-214ENST00000522165 WASLO00401 505 aaPredicted RBP34.21■■■■□ 3.07
COL13A1-214ENST00000522165 ATP7BP35670 1465 aa34.21■■■■□ 3.07
COL13A1-214ENST00000522165 SLIT1O75093 1534 aa34.21■■■■□ 3.07
COL13A1-214ENST00000522165 APAF1O14727 1248 aa34.2■■■■□ 3.07
COL13A1-214ENST00000522165 FYB1O15117 783 aa34.2■■■■□ 3.07
COL13A1-214ENST00000522165 CFAP53Q96M91 514 aa34.2■■■■□ 3.07
COL13A1-214ENST00000522165 ARHGAP23Q9P227 1491 aa34.2■■■■□ 3.07
COL13A1-214ENST00000522165 RRP1P56182 461 aaKnown RBP34.19■■■■□ 3.06
COL13A1-214ENST00000522165 GGNBP2Q9H3C7 697 aa34.19■■■■□ 3.06
COL13A1-214ENST00000522165 TSHZ2Q9NRE2 1034 aa34.18■■■■□ 3.06
COL13A1-214ENST00000522165 EID1Q9Y6B2 187 aa34.17■■■■□ 3.06
COL13A1-214ENST00000522165 GOLGA2Q08379 1002 aa34.16■■■■□ 3.06
COL13A1-214ENST00000522165 PLPPR3Q6T4P5 718 aa34.16■■■■□ 3.06
COL13A1-214ENST00000522165 NGEFQ8N5V2 710 aa34.16■■■■□ 3.06
COL13A1-214ENST00000522165 ROBO2Q9HCK4 1378 aa34.14■■■■□ 3.06
COL13A1-214ENST00000522165 KIF20BQ96Q89 1820 aa34.13■■■■□ 3.05
COL13A1-214ENST00000522165 DUSP27Q5VZP5 1158 aa34.13■■■■□ 3.05
COL13A1-214ENST00000522165 B4GALNT3Q6L9W6 998 aa34.11■■■■□ 3.05
COL13A1-214ENST00000522165 PPIP5K1Q6PFW1 1433 aa34.1■■■■□ 3.05
COL13A1-214ENST00000522165 THEMISQ8N1K5 641 aaPredicted RBP34.1■■■■□ 3.05
COL13A1-214ENST00000522165 CPSF1Q10570 1443 aaKnown RBP34.09■■■■□ 3.05
COL13A1-214ENST00000522165 SLFN5Q08AF3 891 aa34.09■■■■□ 3.05
COL13A1-214ENST00000522165 RUNDC1Q96C34 613 aa34.08■■■■□ 3.05
COL13A1-214ENST00000522165 NUDT16Q96DE0 195 aaKnown RBP34.08■■■■□ 3.05
COL13A1-214ENST00000522165 TRMT2AQ8IZ69 625 aaKnown RBP34.07■■■■□ 3.04
COL13A1-214ENST00000522165 SLC26A8Q96RN1 970 aa34.06■■■■□ 3.04
COL13A1-214ENST00000522165 ADGRB2O60241 1585 aa34.05■■■■□ 3.04
COL13A1-214ENST00000522165 PTPRUQ92729 1446 aa34.05■■■■□ 3.04
COL13A1-214ENST00000522165 IQSEC2Q5JU85 1478 aa34.04■■■■□ 3.04
COL13A1-214ENST00000522165 TBX22Q9Y458 520 aa34.03■■■■□ 3.04
COL13A1-214ENST00000522165 CCDC61Q9Y6R9 512 aa34.03■■■■□ 3.04
COL13A1-214ENST00000522165 EDC4Q6P2E9 1401 aaKnown RBP34.03■■■■□ 3.04
COL13A1-214ENST00000522165 COL3A1P02461 1466 aaPredicted RBP34.03■■■■□ 3.04
COL13A1-214ENST00000522165 CDC42BPGQ6DT37 1551 aa34.03■■■■□ 3.04
COL13A1-214ENST00000522165 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.03■■■■□ 3.04
COL13A1-214ENST00000522165 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.02■■■■□ 3.04
COL13A1-214ENST00000522165 RIMS1Q86UR5 1692 aaKnown RBP33.99■■■■□ 3.03
COL13A1-214ENST00000522165 SPINK5Q9NQ38 1064 aaPredicted RBP33.99■■■■□ 3.03
COL13A1-214ENST00000522165 DIP2AQ14689 1571 aa33.99■■■■□ 3.03
COL13A1-214ENST00000522165 PRR36Q9H6K5 1346 aa33.99■■■■□ 3.03
COL13A1-214ENST00000522165 E9PSI1 815 aa33.99■■■■□ 3.03
COL13A1-214ENST00000522165 NCKAP5LQ9HCH0 1330 aa33.97■■■■□ 3.03
COL13A1-214ENST00000522165 CEP170BQ9Y4F5 1589 aaPredicted RBP33.97■■■■□ 3.03
COL13A1-214ENST00000522165 U2AF1L5P0DN76 240 aaPredicted RBP33.97■■■■□ 3.03
COL13A1-214ENST00000522165 U2AF1Q01081 240 aaKnown RBP eCLIP33.97■■■■□ 3.03
COL13A1-214ENST00000522165 WWC1Q8IX03 1113 aa33.97■■■■□ 3.03
COL13A1-214ENST00000522165 TCP11L2Q8N4U5 519 aa33.97■■■■□ 3.03
COL13A1-214ENST00000522165 MON2Q7Z3U7 1717 aa33.96■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms