RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 FAM135BQ49AJ0 1406 aa29.66■■■□□ 2.34
R3HCC1-208ENST00000522012 QRICH2Q9H0J4 1663 aa29.64■■■□□ 2.34
R3HCC1-208ENST00000522012 KCNA6P17658 529 aa29.64■■■□□ 2.34
R3HCC1-208ENST00000522012 CPS1P31327 1500 aa29.63■■■□□ 2.33
R3HCC1-208ENST00000522012 EVC2Q86UK5 1308 aa29.62■■■□□ 2.33
R3HCC1-208ENST00000522012 KNDC1Q76NI1 1749 aa29.62■■■□□ 2.33
R3HCC1-208ENST00000522012 STRCQ7RTU9 1775 aa29.6■■■□□ 2.33
R3HCC1-208ENST00000522012 PTCH1Q13635 1447 aa29.59■■■□□ 2.33
R3HCC1-208ENST00000522012 XRN1Q8IZH2 1706 aaKnown RBP29.55■■■□□ 2.32
R3HCC1-208ENST00000522012 SRPK2P78362 688 aaKnown RBP29.54■■■□□ 2.32
R3HCC1-208ENST00000522012 TULP4Q9NRJ4 1543 aa29.53■■■□□ 2.32
R3HCC1-208ENST00000522012 CDK19Q9BWU1 502 aa29.53■■■□□ 2.32
R3HCC1-208ENST00000522012 CABP2Q9NPB3 220 aa29.53■■■□□ 2.32
R3HCC1-208ENST00000522012 PUS7Q96PZ0 661 aaKnown RBP29.5■■■□□ 2.31
R3HCC1-208ENST00000522012 CHD2O14647 1828 aaKnown RBP29.5■■■□□ 2.31
R3HCC1-208ENST00000522012 WASLO00401 505 aaPredicted RBP29.49■■■□□ 2.31
R3HCC1-208ENST00000522012 RBM33Q96EV2 1170 aaKnown RBP29.46■■■□□ 2.31
R3HCC1-208ENST00000522012 PROSER2Q86WR7 435 aaPredicted RBP29.45■■■□□ 2.31
R3HCC1-208ENST00000522012 TMC1Q8TDI8 760 aa29.45■■■□□ 2.31
R3HCC1-208ENST00000522012 NWD1Q149M9 1564 aa29.45■■■□□ 2.3
R3HCC1-208ENST00000522012 PANK3Q9H999 370 aa29.44■■■□□ 2.3
R3HCC1-208ENST00000522012 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.43■■■□□ 2.3
R3HCC1-208ENST00000522012 ATAD2Q6PL18 1390 aa29.41■■■□□ 2.3
R3HCC1-208ENST00000522012 C14orf37Q86TY3 774 aa29.4■■■□□ 2.3
R3HCC1-208ENST00000522012 SLC12A5Q9H2X9 1139 aa29.4■■■□□ 2.3
R3HCC1-208ENST00000522012 NKTRP30414 1462 aaKnown RBP29.39■■■□□ 2.3
R3HCC1-208ENST00000522012 ADGRB2O60241 1585 aa29.37■■■□□ 2.29
R3HCC1-208ENST00000522012 ZNF335Q9H4Z2 1342 aaPredicted RBP29.36■■■□□ 2.29
R3HCC1-208ENST00000522012 NUDT16Q96DE0 195 aaKnown RBP29.36■■■□□ 2.29
R3HCC1-208ENST00000522012 NUTM2FA1L443 756 aa29.35■■■□□ 2.29
R3HCC1-208ENST00000522012 MIER1Q8N108 512 aa29.35■■■□□ 2.29
R3HCC1-208ENST00000522012 ANP32CO43423 234 aa29.34■■■□□ 2.29
R3HCC1-208ENST00000522012 CABP1Q9NZU7 370 aa29.33■■■□□ 2.29
R3HCC1-208ENST00000522012 NINLQ9Y2I6 1382 aa29.33■■■□□ 2.29
R3HCC1-208ENST00000522012 MYOM1P52179 1685 aa29.32■■■□□ 2.28
R3HCC1-208ENST00000522012 ADGRL3Q9HAR2 1447 aa29.32■■■□□ 2.28
R3HCC1-208ENST00000522012 TMEM94Q12767 1356 aa29.31■■■□□ 2.28
R3HCC1-208ENST00000522012 CCDC61Q9Y6R9 512 aa29.31■■■□□ 2.28
R3HCC1-208ENST00000522012 LTBP4Q8N2S1 1624 aa29.31■■■□□ 2.28
R3HCC1-208ENST00000522012 PRR36Q9H6K5 1346 aa29.31■■■□□ 2.28
R3HCC1-208ENST00000522012 PER1O15534 1290 aaPredicted RBP29.3■■■□□ 2.28
R3HCC1-208ENST00000522012 CNGB1Q14028 1251 aaPredicted RBP29.3■■■□□ 2.28
R3HCC1-208ENST00000522012 KNSTRNQ9Y448 316 aa29.29■■■□□ 2.28
R3HCC1-208ENST00000522012 IQSEC2Q5JU85 1478 aa29.28■■■□□ 2.28
R3HCC1-208ENST00000522012 STRCP1A6NGW2 1772 aa29.28■■■□□ 2.28
R3HCC1-208ENST00000522012 TERF2IPQ9NYB0 399 aa29.27■■■□□ 2.28
R3HCC1-208ENST00000522012 PPIP5K1Q6PFW1 1433 aa29.26■■■□□ 2.28
R3HCC1-208ENST00000522012 CARD14Q9BXL6 1004 aa29.26■■■□□ 2.27
R3HCC1-208ENST00000522012 C19orf44Q9H6X5 657 aa29.26■■■□□ 2.27
R3HCC1-208ENST00000522012 ATP7BP35670 1465 aa29.26■■■□□ 2.27
R3HCC1-208ENST00000522012 ANKRD36BQ8N2N9 1353 aa29.26■■■□□ 2.27
R3HCC1-208ENST00000522012 NCOA3Q9Y6Q9 1424 aa29.25■■■□□ 2.27
R3HCC1-208ENST00000522012 NALCNQ8IZF0 1738 aa29.25■■■□□ 2.27
R3HCC1-208ENST00000522012 HDGFL2Q7Z4V5 671 aaPredicted RBP29.25■■■□□ 2.27
R3HCC1-208ENST00000522012 CDC42BPGQ6DT37 1551 aa29.23■■■□□ 2.27
R3HCC1-208ENST00000522012 A0A1W2PP64 1363 aa29.21■■■□□ 2.27
R3HCC1-208ENST00000522012 ANKARQ7Z5J8 1434 aa29.21■■■□□ 2.27
R3HCC1-208ENST00000522012 LRRC7Q96NW7 1537 aa29.2■■■□□ 2.26
R3HCC1-208ENST00000522012 NSD3Q9BZ95 1437 aa29.19■■■□□ 2.26
R3HCC1-208ENST00000522012 ATF3P18847 181 aa29.19■■■□□ 2.26
R3HCC1-208ENST00000522012 CC2D1BQ5T0F9 858 aaKnown RBP29.19■■■□□ 2.26
R3HCC1-208ENST00000522012 PRKRIP1Q9H875 184 aaPredicted RBP29.19■■■□□ 2.26
R3HCC1-208ENST00000522012 CD163L1Q9NR16 1453 aa29.18■■■□□ 2.26
R3HCC1-208ENST00000522012 PLEKHG3A1L390 1219 aa29.18■■■□□ 2.26
R3HCC1-208ENST00000522012 MSH6P52701 1360 aa29.17■■■□□ 2.26
R3HCC1-208ENST00000522012 AMER1Q5JTC6 1135 aaPredicted RBP29.16■■■□□ 2.26
R3HCC1-208ENST00000522012 PMFBP1Q8TBY8 1022 aa29.16■■■□□ 2.26
R3HCC1-208ENST00000522012 FMN2Q9NZ56 1722 aa29.16■■■□□ 2.26
R3HCC1-208ENST00000522012 KTN1Q86UP2 1357 aaKnown RBP29.16■■■□□ 2.26
R3HCC1-208ENST00000522012 USP32Q8NFA0 1604 aa29.15■■■□□ 2.26
R3HCC1-208ENST00000522012 ACEP12821 1306 aa29.14■■■□□ 2.26
R3HCC1-208ENST00000522012 CPSF1Q10570 1443 aaKnown RBP29.13■■■□□ 2.25
R3HCC1-208ENST00000522012 ZNF692Q9BU19 519 aaPredicted RBP29.13■■■□□ 2.25
R3HCC1-208ENST00000522012 ESCO1Q5FWF5 840 aa29.12■■■□□ 2.25
R3HCC1-208ENST00000522012 CADPS2Q86UW7 1296 aa29.12■■■□□ 2.25
R3HCC1-208ENST00000522012 NGDNQ8NEJ9 315 aaKnown RBP29.12■■■□□ 2.25
R3HCC1-208ENST00000522012 CGNL1Q0VF96 1302 aa29.12■■■□□ 2.25
R3HCC1-208ENST00000522012 DCCP43146 1447 aa29.11■■■□□ 2.25
R3HCC1-208ENST00000522012 RALBP1Q15311 655 aa29.1■■■□□ 2.25
R3HCC1-208ENST00000522012 TOPAZ1Q8N9V7 1692 aa29.1■■■□□ 2.25
R3HCC1-208ENST00000522012 PHF8Q9UPP1 1060 aa29.1■■■□□ 2.25
R3HCC1-208ENST00000522012 NPC1L1Q9UHC9 1359 aa29.09■■■□□ 2.25
R3HCC1-208ENST00000522012 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.07■■■□□ 2.24
R3HCC1-208ENST00000522012 ORAI2Q96SN7 254 aa29.06■■■□□ 2.24
R3HCC1-208ENST00000522012 POLR3AO14802 1390 aaPredicted RBP29.06■■■□□ 2.24
R3HCC1-208ENST00000522012 C1orf167Q5SNV9 1468 aa29.05■■■□□ 2.24
R3HCC1-208ENST00000522012 PARD3Q8TEW0 1356 aa29.05■■■□□ 2.24
R3HCC1-208ENST00000522012 ITSN1Q15811 1721 aa29.04■■■□□ 2.24
R3HCC1-208ENST00000522012 MST1RQ04912 1400 aa29.04■■■□□ 2.24
R3HCC1-208ENST00000522012 EDC4Q6P2E9 1401 aaKnown RBP29.04■■■□□ 2.24
R3HCC1-208ENST00000522012 UBAP1LF5GYI3 381 aa29.03■■■□□ 2.24
R3HCC1-208ENST00000522012 CCER2I3L3R5 266 aa29.03■■■□□ 2.24
R3HCC1-208ENST00000522012 XIRP1Q702N8 1843 aaKnown RBP29.02■■■□□ 2.24
R3HCC1-208ENST00000522012 RGPD8O14715 1765 aaPredicted RBP29.01■■■□□ 2.24
R3HCC1-208ENST00000522012 FYB1O15117 783 aa29.01■■■□□ 2.23
R3HCC1-208ENST00000522012 USP6P35125 1406 aa29.01■■■□□ 2.23
R3HCC1-208ENST00000522012 MORC1Q86VD1 984 aa29■■■□□ 2.23
R3HCC1-208ENST00000522012 GGNBP2Q9H3C7 697 aa29■■■□□ 2.23
R3HCC1-208ENST00000522012 NSD2O96028 1365 aa28.99■■■□□ 2.23
R3HCC1-208ENST00000522012 MYBBP1AQ9BQG0 1328 aaKnown RBP28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms