RNA–Protein interactions for RNA: ENST00000521683.5

CTNNA1-229, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-229ENST00000521683 KNDC1Q76NI1 1749 aa13.28□□□□□ -0.28
CTNNA1-229ENST00000521683 ORAI2Q96SN7 254 aa13.28□□□□□ -0.28
CTNNA1-229ENST00000521683 LRPPRCP42704 1394 aaKnown RBP13.28□□□□□ -0.28
CTNNA1-229ENST00000521683 PIK3C2GO75747 1445 aa13.28□□□□□ -0.28
CTNNA1-229ENST00000521683 ABCC11Q96J66 1382 aa13.27□□□□□ -0.29
CTNNA1-229ENST00000521683 COL22A1Q8NFW1 1626 aaPredicted RBP13.27□□□□□ -0.29
CTNNA1-229ENST00000521683 UPF1Q92900 1129 aaKnown RBP eCLIP13.26□□□□□ -0.29
CTNNA1-229ENST00000521683 C8orf37Q96NL8 207 aa13.26□□□□□ -0.29
CTNNA1-229ENST00000521683 NPHP3Q7Z494 1330 aa13.25□□□□□ -0.29
CTNNA1-229ENST00000521683 RGL3Q3MIN7 710 aa13.25□□□□□ -0.29
CTNNA1-229ENST00000521683 MYOM2P54296 1465 aa13.24□□□□□ -0.29
CTNNA1-229ENST00000521683 PXDNQ92626 1479 aa13.24□□□□□ -0.29
CTNNA1-229ENST00000521683 RGS12O14924 1447 aa13.24□□□□□ -0.29
CTNNA1-229ENST00000521683 RBM6P78332 1123 aaKnown RBP13.24□□□□□ -0.29
CTNNA1-229ENST00000521683 NRXN1Q9ULB1 1477 aa13.23□□□□□ -0.29
CTNNA1-229ENST00000521683 YTHDC2Q9H6S0 1430 aaKnown RBP13.23□□□□□ -0.29
CTNNA1-229ENST00000521683 QTRT2Q9H974 415 aaKnown RBP13.23□□□□□ -0.29
CTNNA1-229ENST00000521683 ADAMTS2O95450 1211 aa13.22□□□□□ -0.29
CTNNA1-229ENST00000521683 ESCO1Q5FWF5 840 aa13.22□□□□□ -0.29
CTNNA1-229ENST00000521683 NGLY1Q96IV0 654 aa13.22□□□□□ -0.29
CTNNA1-229ENST00000521683 FMN2Q9NZ56 1722 aa13.22□□□□□ -0.29
CTNNA1-229ENST00000521683 KIF1AQ12756 1690 aa13.21□□□□□ -0.29
CTNNA1-229ENST00000521683 WAPLQ7Z5K2 1190 aa13.21□□□□□ -0.29
CTNNA1-229ENST00000521683 FNBP4Q8N3X1 1017 aaPredicted RBP13.21□□□□□ -0.29
CTNNA1-229ENST00000521683 SIRT1Q96EB6 747 aa13.21□□□□□ -0.29
CTNNA1-229ENST00000521683 STK26Q9P289 416 aa13.21□□□□□ -0.29
CTNNA1-229ENST00000521683 PLEKHH1Q9ULM0 1364 aa13.2□□□□□ -0.3
CTNNA1-229ENST00000521683 TMEM132EQ6IEE7 984 aa13.2□□□□□ -0.3
CTNNA1-229ENST00000521683 C14orf93Q9H972 538 aaKnown RBP13.19□□□□□ -0.3
CTNNA1-229ENST00000521683 TRPC5Q9UL62 973 aaPredicted RBP13.19□□□□□ -0.3
CTNNA1-229ENST00000521683 ATRNO75882 1429 aa13.19□□□□□ -0.3
CTNNA1-229ENST00000521683 FOXO3O43524 673 aa13.18□□□□□ -0.3
CTNNA1-229ENST00000521683 USP21Q9UK80 565 aa13.18□□□□□ -0.3
CTNNA1-229ENST00000521683 MARF1Q9Y4F3 1742 aaKnown RBP13.18□□□□□ -0.3
CTNNA1-229ENST00000521683 DHX57Q6P158 1386 aaKnown RBP13.18□□□□□ -0.3
CTNNA1-229ENST00000521683 RAB3GAP2Q9H2M9 1393 aa13.18□□□□□ -0.3
CTNNA1-229ENST00000521683 DLC1Q96QB1 1528 aa13.17□□□□□ -0.3
CTNNA1-229ENST00000521683 SPATA31A3Q5VYP0 1347 aa13.15□□□□□ -0.3
CTNNA1-229ENST00000521683 NUTM2FA1L443 756 aa13.15□□□□□ -0.3
CTNNA1-229ENST00000521683 XPCQ01831 940 aaPredicted RBP13.15□□□□□ -0.3
CTNNA1-229ENST00000521683 CFAP70Q5T0N1 1121 aa13.15□□□□□ -0.3
CTNNA1-229ENST00000521683 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.15□□□□□ -0.3
CTNNA1-229ENST00000521683 ATAD2Q6PL18 1390 aa13.15□□□□□ -0.3
CTNNA1-229ENST00000521683 BCL9LQ86UU0 1499 aa13.15□□□□□ -0.3
CTNNA1-229ENST00000521683 ADGRB1O14514 1584 aa13.14□□□□□ -0.31
CTNNA1-229ENST00000521683 ADGRB2O60241 1585 aa13.14□□□□□ -0.31
CTNNA1-229ENST00000521683 ANKARQ7Z5J8 1434 aa13.13□□□□□ -0.31
CTNNA1-229ENST00000521683 USP32Q8NFA0 1604 aa13.13□□□□□ -0.31
CTNNA1-229ENST00000521683 SLIT2O94813 1529 aa13.13□□□□□ -0.31
CTNNA1-229ENST00000521683 TNS3Q68CZ2 1445 aa13.13□□□□□ -0.31
CTNNA1-229ENST00000521683 KRT28Q7Z3Y7 464 aa13.12□□□□□ -0.31
CTNNA1-229ENST00000521683 PRAM1Q96QH2 718 aa13.12□□□□□ -0.31
CTNNA1-229ENST00000521683 PHF8Q9UPP1 1060 aa13.12□□□□□ -0.31
CTNNA1-229ENST00000521683 SBNO1A3KN83 1393 aa13.11□□□□□ -0.31
CTNNA1-229ENST00000521683 STAC3Q96MF2 364 aa13.11□□□□□ -0.31
CTNNA1-229ENST00000521683 RGPD8O14715 1765 aaPredicted RBP13.1□□□□□ -0.31
CTNNA1-229ENST00000521683 HRCP23327 699 aa13.1□□□□□ -0.31
CTNNA1-229ENST00000521683 PSME1Q06323 249 aa13.1□□□□□ -0.31
CTNNA1-229ENST00000521683 ARHGEF10O15013 1369 aa13.09□□□□□ -0.31
CTNNA1-229ENST00000521683 EIF3AQ14152 1382 aaKnown RBP13.09□□□□□ -0.31
CTNNA1-229ENST00000521683 EP400Q96L91 3159 aa13.09□□□□□ -0.31
CTNNA1-229ENST00000521683 GJD4Q96KN9 370 aaPredicted RBP13.09□□□□□ -0.31
CTNNA1-229ENST00000521683 ABCA3Q99758 1704 aa13.08□□□□□ -0.32
CTNNA1-229ENST00000521683 UNC5CLQ8IV45 518 aa13.08□□□□□ -0.32
CTNNA1-229ENST00000521683 POGKQ9P215 609 aa13.08□□□□□ -0.32
CTNNA1-229ENST00000521683 RALGAPBQ86X10 1494 aa13.08□□□□□ -0.32
CTNNA1-229ENST00000521683 GLI3P10071 1580 aa13.07□□□□□ -0.32
CTNNA1-229ENST00000521683 SAFB2Q14151 953 aaKnown RBP eCLIP13.07□□□□□ -0.32
CTNNA1-229ENST00000521683 NWD2Q9ULI1 1742 aa13.07□□□□□ -0.32
CTNNA1-229ENST00000521683 TULP4Q9NRJ4 1543 aa13.07□□□□□ -0.32
CTNNA1-229ENST00000521683 PLCH1Q4KWH8 1693 aa13.05□□□□□ -0.32
CTNNA1-229ENST00000521683 TRPM3Q9HCF6 1732 aaPredicted RBP13.05□□□□□ -0.32
CTNNA1-229ENST00000521683 CCDC125Q86Z20 511 aa13.05□□□□□ -0.32
CTNNA1-229ENST00000521683 DCAF11Q8TEB1 546 aa13.05□□□□□ -0.32
CTNNA1-229ENST00000521683 TRAK1Q9UPV9 953 aa13.05□□□□□ -0.32
CTNNA1-229ENST00000521683 HAP1P54257 671 aaPredicted RBP13.04□□□□□ -0.32
CTNNA1-229ENST00000521683 ALS2Q96Q42 1657 aa13.03□□□□□ -0.32
CTNNA1-229ENST00000521683 ARHGEF28Q8N1W1 1705 aaKnown RBP13.03□□□□□ -0.32
CTNNA1-229ENST00000521683 VPS72Q15906 364 aa13.03□□□□□ -0.32
CTNNA1-229ENST00000521683 PMFBP1Q8TBY8 1022 aa13.03□□□□□ -0.32
CTNNA1-229ENST00000521683 PRR36Q9H6K5 1346 aa13.03□□□□□ -0.32
CTNNA1-229ENST00000521683 GPRASP1Q5JY77 1395 aa13.03□□□□□ -0.32
CTNNA1-229ENST00000521683 SRCAPQ6ZRS2 3230 aa13.02□□□□□ -0.32
CTNNA1-229ENST00000521683 WASLO00401 505 aaPredicted RBP13.02□□□□□ -0.33
CTNNA1-229ENST00000521683 CABLES1Q8TDN4 633 aa13.02□□□□□ -0.33
CTNNA1-229ENST00000521683 HIRIP3Q9BW71 556 aaPredicted RBP13.02□□□□□ -0.33
CTNNA1-229ENST00000521683 KDM2AQ9Y2K7 1162 aa13.02□□□□□ -0.33
CTNNA1-229ENST00000521683 MINK1Q8N4C8 1332 aaPredicted RBP13.02□□□□□ -0.33
CTNNA1-229ENST00000521683 LMOD2Q6P5Q4 547 aa13.01□□□□□ -0.33
CTNNA1-229ENST00000521683 ITSN1Q15811 1721 aa13□□□□□ -0.33
CTNNA1-229ENST00000521683 ATP7BP35670 1465 aa13□□□□□ -0.33
CTNNA1-229ENST00000521683 BLMP54132 1417 aaPredicted RBP13□□□□□ -0.33
CTNNA1-229ENST00000521683 ONECUT3O60422 494 aaPredicted RBP13□□□□□ -0.33
CTNNA1-229ENST00000521683 BRWD3Q6RI45 1802 aa12.99□□□□□ -0.33
CTNNA1-229ENST00000521683 NRAPQ86VF7 1730 aa12.99□□□□□ -0.33
CTNNA1-229ENST00000521683 KIAA1210Q9ULL0 1709 aa12.99□□□□□ -0.33
CTNNA1-229ENST00000521683 SEPT12Q8IYM1 358 aa12.99□□□□□ -0.33
CTNNA1-229ENST00000521683 COL14A1Q05707 1796 aaKnown RBP12.99□□□□□ -0.33
CTNNA1-229ENST00000521683 CRYBG1Q9Y4K1 1723 aa12.99□□□□□ -0.33
CTNNA1-229ENST00000521683 FAM83GA6ND36 823 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms