RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 ADGRB3O60242 1522 aa11.92□□□□□ -0.5
CTNNA1-227ENST00000521387 SPHKAPQ2M3C7 1700 aa11.92□□□□□ -0.5
CTNNA1-227ENST00000521387 FYCO1Q9BQS8 1478 aa11.92□□□□□ -0.5
CTNNA1-227ENST00000521387 ONECUT3O60422 494 aaPredicted RBP11.92□□□□□ -0.5
CTNNA1-227ENST00000521387 EIF2AK4Q9P2K8 1649 aaKnown RBP11.92□□□□□ -0.5
CTNNA1-227ENST00000521387 CAMTA1Q9Y6Y1 1673 aa11.91□□□□□ -0.5
CTNNA1-227ENST00000521387 TSPY4P0CV99 314 aa11.91□□□□□ -0.5
CTNNA1-227ENST00000521387 TSPY10P0CW01 314 aa11.91□□□□□ -0.5
CTNNA1-227ENST00000521387 UNC5CLQ8IV45 518 aa11.91□□□□□ -0.5
CTNNA1-227ENST00000521387 NOS1P29475 1434 aa11.91□□□□□ -0.5
CTNNA1-227ENST00000521387 PIK3R4Q99570 1358 aa11.91□□□□□ -0.5
CTNNA1-227ENST00000521387 KRT27Q7Z3Y8 459 aa11.9□□□□□ -0.5
CTNNA1-227ENST00000521387 RIMS2Q9UQ26 1411 aa11.9□□□□□ -0.5
CTNNA1-227ENST00000521387 LAMC1P11047 1609 aa11.89□□□□□ -0.51
CTNNA1-227ENST00000521387 FXR2P51116 673 aaKnown RBP eCLIP11.89□□□□□ -0.513e-10■■■■■ 41
CTNNA1-227ENST00000521387 EZH2Q15910 746 aaKnown RBP11.89□□□□□ -0.51
CTNNA1-227ENST00000521387 COL22A1Q8NFW1 1626 aaPredicted RBP11.89□□□□□ -0.51
CTNNA1-227ENST00000521387 TRPM2O94759 1503 aa11.88□□□□□ -0.51
CTNNA1-227ENST00000521387 SLIT2O94813 1529 aa11.88□□□□□ -0.51
CTNNA1-227ENST00000521387 ORAI2Q96SN7 254 aa11.88□□□□□ -0.51
CTNNA1-227ENST00000521387 NINLQ9Y2I6 1382 aa11.88□□□□□ -0.51
CTNNA1-227ENST00000521387 ARHGEF5Q12774 1597 aa11.88□□□□□ -0.51
CTNNA1-227ENST00000521387 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.86□□□□□ -0.51
CTNNA1-227ENST00000521387 CAMKK2Q96RR4 588 aa11.86□□□□□ -0.51
CTNNA1-227ENST00000521387 SLC52A1Q9NWF4 448 aa11.86□□□□□ -0.51
CTNNA1-227ENST00000521387 ZBTB12Q9Y330 459 aaPredicted RBP11.86□□□□□ -0.51
CTNNA1-227ENST00000521387 C1orf167Q5SNV9 1468 aa11.86□□□□□ -0.51
CTNNA1-227ENST00000521387 DISP2A7MBM2 1401 aa11.86□□□□□ -0.51
CTNNA1-227ENST00000521387 CEP162Q5TB80 1403 aa11.85□□□□□ -0.51
CTNNA1-227ENST00000521387 EHBP1L1Q8N3D4 1523 aa11.84□□□□□ -0.51
CTNNA1-227ENST00000521387 ADGRL3Q9HAR2 1447 aa11.84□□□□□ -0.51
CTNNA1-227ENST00000521387 MARF1Q9Y4F3 1742 aaKnown RBP11.83□□□□□ -0.52
CTNNA1-227ENST00000521387 FAM182BQ5T319 152 aa11.83□□□□□ -0.52
CTNNA1-227ENST00000521387 MYO5BQ9ULV0 1848 aa11.83□□□□□ -0.52
CTNNA1-227ENST00000521387 VPS72Q15906 364 aa11.82□□□□□ -0.52
CTNNA1-227ENST00000521387 PPP1R1BQ9UD71 204 aaPredicted RBP11.82□□□□□ -0.52
CTNNA1-227ENST00000521387 KCNQ2O43526 872 aa11.81□□□□□ -0.52
CTNNA1-227ENST00000521387 SLC34A2O95436 690 aa11.81□□□□□ -0.52
CTNNA1-227ENST00000521387 HDGFP51858 240 aaKnown RBP11.81□□□□□ -0.52
CTNNA1-227ENST00000521387 SPON1Q9HCB6 807 aa11.81□□□□□ -0.52
CTNNA1-227ENST00000521387 LMTK2Q8IWU2 1503 aa11.81□□□□□ -0.52
CTNNA1-227ENST00000521387 DUOX2Q9NRD8 1548 aa11.81□□□□□ -0.52
CTNNA1-227ENST00000521387 XRN1Q8IZH2 1706 aaKnown RBP11.8□□□□□ -0.52
CTNNA1-227ENST00000521387 TMEM131LA2VDJ0 1609 aa11.79□□□□□ -0.52
CTNNA1-227ENST00000521387 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.79□□□□□ -0.52
CTNNA1-227ENST00000521387 GIGYF1O75420 1035 aaPredicted RBP11.78□□□□□ -0.52
CTNNA1-227ENST00000521387 RGPD1P0DJD0 1748 aa11.77□□□□□ -0.52
CTNNA1-227ENST00000521387 TNS1Q9HBL0 1735 aaKnown RBP11.77□□□□□ -0.52
CTNNA1-227ENST00000521387 NALCNQ8IZF0 1738 aa11.77□□□□□ -0.53
CTNNA1-227ENST00000521387 PXDNQ92626 1479 aa11.76□□□□□ -0.53
CTNNA1-227ENST00000521387 METP08581 1390 aa11.76□□□□□ -0.53
CTNNA1-227ENST00000521387 XPCQ01831 940 aaPredicted RBP11.75□□□□□ -0.53
CTNNA1-227ENST00000521387 GCC2Q8IWJ2 1684 aa11.75□□□□□ -0.53
CTNNA1-227ENST00000521387 FAM98CQ17RN3 349 aaKnown RBP11.74□□□□□ -0.53
CTNNA1-227ENST00000521387 RRP7BPQ9NSQ0 103 aa11.74□□□□□ -0.53
CTNNA1-227ENST00000521387 KIF15Q9NS87 1388 aa11.74□□□□□ -0.53
CTNNA1-227ENST00000521387 ERBINQ96RT1 1412 aa11.74□□□□□ -0.53
CTNNA1-227ENST00000521387 CHD4Q14839 1912 aa11.74□□□□□ -0.53
CTNNA1-227ENST00000521387 KANK1Q14678 1352 aa11.73□□□□□ -0.53
CTNNA1-227ENST00000521387 NRXN3Q9Y4C0 1643 aa11.72□□□□□ -0.53
CTNNA1-227ENST00000521387 RPRD2Q5VT52 1461 aaKnown RBP11.72□□□□□ -0.53
CTNNA1-227ENST00000521387 TRIM37O94972 964 aa11.72□□□□□ -0.53
CTNNA1-227ENST00000521387 CCDC9Q9Y3X0 531 aaKnown RBP11.72□□□□□ -0.53
CTNNA1-227ENST00000521387 PARD3Q8TEW0 1356 aa11.7□□□□□ -0.54
CTNNA1-227ENST00000521387 NPHP3Q7Z494 1330 aa11.7□□□□□ -0.54
CTNNA1-227ENST00000521387 NUP188Q5SRE5 1749 aa11.7□□□□□ -0.54
CTNNA1-227ENST00000521387 A0A0G2JS52 829 aa11.7□□□□□ -0.54
CTNNA1-227ENST00000521387 FOXO3O43524 673 aa11.7□□□□□ -0.54
CTNNA1-227ENST00000521387 APBA3O96018 575 aa11.7□□□□□ -0.54
CTNNA1-227ENST00000521387 CHGAP10645 457 aaKnown RBP11.7□□□□□ -0.54
CTNNA1-227ENST00000521387 PTGER2P43116 358 aa11.7□□□□□ -0.54
CTNNA1-227ENST00000521387 MYT1Q01538 1121 aa11.7□□□□□ -0.54
CTNNA1-227ENST00000521387 PDGFDQ9GZP0 370 aaPredicted RBP11.7□□□□□ -0.54
CTNNA1-227ENST00000521387 RREB1Q92766 1687 aa11.7□□□□□ -0.54
CTNNA1-227ENST00000521387 ADGRL2O95490 1459 aa11.7□□□□□ -0.54
CTNNA1-227ENST00000521387 SYT17Q9BSW7 474 aa11.69□□□□□ -0.54
CTNNA1-227ENST00000521387 NRKQ7Z2Y5 1582 aa11.69□□□□□ -0.54
CTNNA1-227ENST00000521387 USP32Q8NFA0 1604 aa11.68□□□□□ -0.54
CTNNA1-227ENST00000521387 NBPF8Q3BBV2 869 aa11.68□□□□□ -0.54
CTNNA1-227ENST00000521387 NBPF14Q5TI25 921 aa11.68□□□□□ -0.54
CTNNA1-227ENST00000521387 FOXD4L1Q9NU39 408 aa11.68□□□□□ -0.54
CTNNA1-227ENST00000521387 SPATA31A3Q5VYP0 1347 aa11.67□□□□□ -0.54
CTNNA1-227ENST00000521387 FAM83GA6ND36 823 aa11.67□□□□□ -0.54
CTNNA1-227ENST00000521387 CABLES1Q8TDN4 633 aa11.67□□□□□ -0.54
CTNNA1-227ENST00000521387 PTPN23Q9H3S7 1636 aa11.67□□□□□ -0.54
CTNNA1-227ENST00000521387 ESCO1Q5FWF5 840 aa11.66□□□□□ -0.54
CTNNA1-227ENST00000521387 COL13A1Q5TAT6 717 aaPredicted RBP11.66□□□□□ -0.54
CTNNA1-227ENST00000521387 FHDC1Q9C0D6 1143 aaPredicted RBP11.66□□□□□ -0.54
CTNNA1-227ENST00000521387 HSPA6P17066 643 aa11.65□□□□□ -0.54
CTNNA1-227ENST00000521387 SHANK3Q9BYB0 1731 aa11.65□□□□□ -0.54
CTNNA1-227ENST00000521387 ROBO2Q9HCK4 1378 aa11.65□□□□□ -0.55
CTNNA1-227ENST00000521387 MYOM1P52179 1685 aa11.65□□□□□ -0.55
CTNNA1-227ENST00000521387 PLCH1Q4KWH8 1693 aa11.65□□□□□ -0.55
CTNNA1-227ENST00000521387 NWD2Q9ULI1 1742 aa11.64□□□□□ -0.55
CTNNA1-227ENST00000521387 PRELPP51888 382 aa11.64□□□□□ -0.55
CTNNA1-227ENST00000521387 ADGRB2O60241 1585 aa11.63□□□□□ -0.55
CTNNA1-227ENST00000521387 ABCC5O15440 1437 aa11.63□□□□□ -0.55
CTNNA1-227ENST00000521387 ZBTB7AO95365 584 aa11.63□□□□□ -0.55
CTNNA1-227ENST00000521387 PRKAR2AP13861 404 aaKnown RBP11.63□□□□□ -0.55
CTNNA1-227ENST00000521387 FAM196AQ6ZSG2 479 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms