RNA–Protein interactions for RNA: ENST00000520867.5

CPEB4-208, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-208ENST00000520867 PTPN23Q9H3S7 1636 aa15.72■□□□□ 0.11
CPEB4-208ENST00000520867 KIF16BQ96L93 1317 aa15.72■□□□□ 0.11
CPEB4-208ENST00000520867 OS9Q13438 667 aaPredicted RBP15.72■□□□□ 0.11
CPEB4-208ENST00000520867 GPATCH11Q8N954 259 aa15.72■□□□□ 0.11
CPEB4-208ENST00000520867 MORC2Q9Y6X9 1032 aaPredicted RBP15.72■□□□□ 0.11
CPEB4-208ENST00000520867 GYS2P54840 703 aa15.72■□□□□ 0.11
CPEB4-208ENST00000520867 KLHL40Q2TBA0 621 aa15.72■□□□□ 0.11
CPEB4-208ENST00000520867 DNAJC21Q5F1R6 531 aaKnown RBP15.72■□□□□ 0.11
CPEB4-208ENST00000520867 MAPK8IP3Q9UPT6 1336 aa15.71■□□□□ 0.11
CPEB4-208ENST00000520867 RASSF4Q9H2L5 321 aa15.71■□□□□ 0.11
CPEB4-208ENST00000520867 CTR9Q6PD62 1173 aa15.71■□□□□ 0.11
CPEB4-208ENST00000520867 CTIFO43310 598 aaKnown RBP15.7■□□□□ 0.1
CPEB4-208ENST00000520867 NOLC1Q14978 699 aaKnown RBP eCLIP15.7■□□□□ 0.1
CPEB4-208ENST00000520867 RAB3GAP1Q15042 981 aa15.7■□□□□ 0.1
CPEB4-208ENST00000520867 PIBF1Q8WXW3 757 aa15.7■□□□□ 0.1
CPEB4-208ENST00000520867 TOMM22Q9NS69 142 aa15.7■□□□□ 0.1
CPEB4-208ENST00000520867 DONSONQ9NYP3 566 aa15.7■□□□□ 0.1
CPEB4-208ENST00000520867 AQRO60306 1485 aaKnown RBP eCLIP15.7■□□□□ 0.13e-6■■■■■ 29.7
CPEB4-208ENST00000520867 RGL3Q3MIN7 710 aa15.7■□□□□ 0.1
CPEB4-208ENST00000520867 BRMS1Q9HCU9 246 aa15.7■□□□□ 0.1
CPEB4-208ENST00000520867 SLC26A8Q96RN1 970 aa15.69■□□□□ 0.1
CPEB4-208ENST00000520867 RTEL1-TNFRSF6BF6WH68 1400 aa15.69■□□□□ 0.1
CPEB4-208ENST00000520867 MYBBP1AQ9BQG0 1328 aaKnown RBP15.69■□□□□ 0.1
CPEB4-208ENST00000520867 CDCA8Q53HL2 280 aa15.69■□□□□ 0.1
CPEB4-208ENST00000520867 FKBP5Q13451 457 aaPredicted RBP15.68■□□□□ 0.1
CPEB4-208ENST00000520867 DDX49Q9Y6V7 483 aaKnown RBP15.68■□□□□ 0.1
CPEB4-208ENST00000520867 RIOK3O14730 519 aaKnown RBP15.68■□□□□ 0.1
CPEB4-208ENST00000520867 PRIM1P49642 420 aaKnown RBP15.68■□□□□ 0.1
CPEB4-208ENST00000520867 RAI14Q9P0K7 980 aa15.68■□□□□ 0.1
CPEB4-208ENST00000520867 PPP6R1Q9UPN7 881 aa15.68■□□□□ 0.1
CPEB4-208ENST00000520867 MIA2Q96PC5 1412 aa15.68■□□□□ 0.1
CPEB4-208ENST00000520867 NFATC2IPQ8NCF5 419 aa15.67■□□□□ 0.1
CPEB4-208ENST00000520867 L3MBTL2Q969R5 705 aa15.67■□□□□ 0.1
CPEB4-208ENST00000520867 FMN1Q68DA7 1419 aa15.67■□□□□ 0.1
CPEB4-208ENST00000520867 ZSCAN23Q3MJ62 389 aa15.67■□□□□ 0.1
CPEB4-208ENST00000520867 NCBP1Q09161 790 aaKnown RBP15.66■□□□□ 0.1
CPEB4-208ENST00000520867 C17orf53Q8N3J3 647 aaPredicted RBP15.66■□□□□ 0.1
CPEB4-208ENST00000520867 CCDC189A1A4V9 331 aa15.66■□□□□ 0.1
CPEB4-208ENST00000520867 IGHDP01880 384 aa15.66■□□□□ 0.1
CPEB4-208ENST00000520867 KIF15Q9NS87 1388 aa15.66■□□□□ 0.1
CPEB4-208ENST00000520867 CYP2C19P33261 490 aa15.65■□□□□ 0.1
CPEB4-208ENST00000520867 TSGA10IPQ3SY00 556 aa15.65■□□□□ 0.1
CPEB4-208ENST00000520867 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.65■□□□□ 0.1
CPEB4-208ENST00000520867 CCDC144AA2RUR9 1427 aa15.65■□□□□ 0.1
CPEB4-208ENST00000520867 KRT222Q8N1A0 295 aa15.64■□□□□ 0.1
CPEB4-208ENST00000520867 KIF18AQ8NI77 898 aa15.64■□□□□ 0.1
CPEB4-208ENST00000520867 CIZ1Q9ULV3 898 aaPredicted RBP15.64■□□□□ 0.1
CPEB4-208ENST00000520867 TNNT1P13805 278 aa15.64■□□□□ 0.09
CPEB4-208ENST00000520867 SRPK2P78362 688 aaKnown RBP15.64■□□□□ 0.09
CPEB4-208ENST00000520867 SPTLC3Q9NUV7 552 aa15.64■□□□□ 0.09
CPEB4-208ENST00000520867 ZNF446Q9NWS9 450 aa15.64■□□□□ 0.09
CPEB4-208ENST00000520867 CFAP43Q8NDM7 1665 aa15.64■□□□□ 0.09
CPEB4-208ENST00000520867 CASQ1P31415 396 aa15.64■□□□□ 0.09
CPEB4-208ENST00000520867 TRIM66O15016 1216 aa15.63■□□□□ 0.09
CPEB4-208ENST00000520867 RAD50Q92878 1312 aa15.63■□□□□ 0.09
CPEB4-208ENST00000520867 NPC1L1Q9UHC9 1359 aa15.63■□□□□ 0.09
CPEB4-208ENST00000520867 HSCBQ8IWL3 235 aa15.63■□□□□ 0.09
CPEB4-208ENST00000520867 BORCS6Q96GS4 357 aa15.63■□□□□ 0.09
CPEB4-208ENST00000520867 POLKQ9UBT6 870 aa15.63■□□□□ 0.09
CPEB4-208ENST00000520867 EIF3AQ14152 1382 aaKnown RBP15.62■□□□□ 0.09
CPEB4-208ENST00000520867 NAIPQ13075 1403 aa15.62■□□□□ 0.09
CPEB4-208ENST00000520867 CAVIN1Q6NZI2 390 aaKnown RBP15.62■□□□□ 0.09
CPEB4-208ENST00000520867 NBPF11Q86T75 865 aa15.62■□□□□ 0.09
CPEB4-208ENST00000520867 SMC5Q8IY18 1101 aa15.62■□□□□ 0.09
CPEB4-208ENST00000520867 PLEKHH2Q8IVE3 1493 aa15.62■□□□□ 0.09
CPEB4-208ENST00000520867 NBPF8Q3BBV2 869 aa15.62■□□□□ 0.09
CPEB4-208ENST00000520867 CREBRFQ8IUR6 639 aa15.62■□□□□ 0.09
CPEB4-208ENST00000520867 SUFUQ9UMX1 484 aa15.62■□□□□ 0.09
CPEB4-208ENST00000520867 TDO2P48775 406 aa15.61■□□□□ 0.09
CPEB4-208ENST00000520867 KIAA1107Q9UPP5 1409 aa15.61■□□□□ 0.09
CPEB4-208ENST00000520867 CXorf56Q9H5V9 222 aa15.61■□□□□ 0.09
CPEB4-208ENST00000520867 ST7Q9NRC1 585 aa15.61■□□□□ 0.09
CPEB4-208ENST00000520867 C10orf67Q8IYJ2 551 aa15.6■□□□□ 0.09
CPEB4-208ENST00000520867 DIAPH3Q9NSV4 1193 aa15.6■□□□□ 0.09
CPEB4-208ENST00000520867 ZMYM3Q14202 1370 aa15.6■□□□□ 0.09
CPEB4-208ENST00000520867 KIF1CO43896 1103 aaKnown RBP15.6■□□□□ 0.09
CPEB4-208ENST00000520867 SART3Q15020 963 aaKnown RBP15.6■□□□□ 0.09
CPEB4-208ENST00000520867 DRC1Q96MC2 740 aa15.6■□□□□ 0.09
CPEB4-208ENST00000520867 MED4Q9NPJ6 270 aa15.6■□□□□ 0.09
CPEB4-208ENST00000520867 FAM53CQ9NYF3 392 aa15.6■□□□□ 0.09
CPEB4-208ENST00000520867 JRKLQ9Y4A0 524 aa15.6■□□□□ 0.09
CPEB4-208ENST00000520867 TPRNQ4KMQ1 711 aa15.59■□□□□ 0.09
CPEB4-208ENST00000520867 FAM212AQ96EL1 285 aa15.59■□□□□ 0.09
CPEB4-208ENST00000520867 C22orf23Q9BZE7 217 aa15.59■□□□□ 0.09
CPEB4-208ENST00000520867 CTTNBP2Q8WZ74 1663 aa15.59■□□□□ 0.09
CPEB4-208ENST00000520867 ARHGAP31Q2M1Z3 1444 aa15.59■□□□□ 0.09
CPEB4-208ENST00000520867 INSRP06213 1382 aa15.59■□□□□ 0.09
CPEB4-208ENST00000520867 HECW1Q76N89 1606 aa15.59■□□□□ 0.09
CPEB4-208ENST00000520867 MYO1CO00159 1063 aa15.59■□□□□ 0.09
CPEB4-208ENST00000520867 ZNF853P0CG23 659 aa15.58■□□□□ 0.08
CPEB4-208ENST00000520867 GOLGA6L22H0YM25 854 aa15.58■□□□□ 0.08
CPEB4-208ENST00000520867 NBPF9Q3BBW0 867 aa15.58■□□□□ 0.08
CPEB4-208ENST00000520867 SYT10Q6XYQ8 523 aa15.58■□□□□ 0.08
CPEB4-208ENST00000520867 CLEC17AQ6ZS10 378 aa15.58■□□□□ 0.08
CPEB4-208ENST00000520867 ATG3Q9NT62 314 aa15.58■□□□□ 0.08
CPEB4-208ENST00000520867 LCMT1Q9UIC8 334 aa15.58■□□□□ 0.08
CPEB4-208ENST00000520867 REC8O95072 547 aa15.57■□□□□ 0.08
CPEB4-208ENST00000520867 CALR3Q96L12 384 aaKnown RBP15.57■□□□□ 0.08
CPEB4-208ENST00000520867 CFAP65Q6ZU64 1925 aaKnown RBP15.57■□□□□ 0.08
CPEB4-208ENST00000520867 TTC36A6NLP5 189 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms