RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 RBM33Q96EV2 1170 aaKnown RBP10.31□□□□□ -0.76
PABPC1-207ENST00000518716 MTRQ99707 1265 aa10.31□□□□□ -0.76
PABPC1-207ENST00000518716 TSKSQ9UJT2 592 aa10.31□□□□□ -0.76
PABPC1-207ENST00000518716 RAPGEF6Q8TEU7 1601 aa10.31□□□□□ -0.76
PABPC1-207ENST00000518716 ZMYM4Q5VZL5 1548 aa10.31□□□□□ -0.76
PABPC1-207ENST00000518716 GTPBP6O43824 516 aaPredicted RBP10.3□□□□□ -0.76
PABPC1-207ENST00000518716 PDZRN3Q9UPQ7 1066 aa10.3□□□□□ -0.76
PABPC1-207ENST00000518716 YEATS2Q9ULM3 1422 aa10.3□□□□□ -0.76
PABPC1-207ENST00000518716 MAGI2Q86UL8 1455 aa10.3□□□□□ -0.76
PABPC1-207ENST00000518716 SOCS7O14512 581 aa10.29□□□□□ -0.76
PABPC1-207ENST00000518716 POGZQ7Z3K3 1410 aa10.29□□□□□ -0.76
PABPC1-207ENST00000518716 FANCAO15360 1455 aa10.29□□□□□ -0.76
PABPC1-207ENST00000518716 PLEKHD1A6NEE1 506 aa10.28□□□□□ -0.76
PABPC1-207ENST00000518716 IL21Q9HBE4 155 aa10.28□□□□□ -0.76
PABPC1-207ENST00000518716 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.28□□□□□ -0.76
PABPC1-207ENST00000518716 TTC37Q6PGP7 1564 aa10.27□□□□□ -0.76
PABPC1-207ENST00000518716 SAMD7Q7Z3H4 446 aa10.27□□□□□ -0.77
PABPC1-207ENST00000518716 ZNF516Q92618 1163 aa10.27□□□□□ -0.77
PABPC1-207ENST00000518716 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.26□□□□□ -0.77
PABPC1-207ENST00000518716 EFCAB5A4FU69 1503 aa10.26□□□□□ -0.77
PABPC1-207ENST00000518716 ZFYVE16Q7Z3T8 1539 aa10.26□□□□□ -0.77
PABPC1-207ENST00000518716 ARHGEF12Q9NZN5 1544 aa10.26□□□□□ -0.77
PABPC1-207ENST00000518716 PACS2Q86VP3 889 aa10.25□□□□□ -0.77
PABPC1-207ENST00000518716 HECW1Q76N89 1606 aa10.25□□□□□ -0.77
PABPC1-207ENST00000518716 SMAPO00193 183 aa10.24□□□□□ -0.77
PABPC1-207ENST00000518716 DPYSL4O14531 572 aa10.24□□□□□ -0.77
PABPC1-207ENST00000518716 TSR1Q2NL82 804 aaKnown RBP10.24□□□□□ -0.77
PABPC1-207ENST00000518716 CADPS2Q86UW7 1296 aa10.24□□□□□ -0.77
PABPC1-207ENST00000518716 DDX12PQ92771 950 aa10.24□□□□□ -0.77
PABPC1-207ENST00000518716 DISP3Q9P2K9 1392 aa10.24□□□□□ -0.77
PABPC1-207ENST00000518716 STRCQ7RTU9 1775 aa10.24□□□□□ -0.77
PABPC1-207ENST00000518716 PLCH2O75038 1416 aa10.24□□□□□ -0.77
PABPC1-207ENST00000518716 ATP10AO60312 1499 aa10.23□□□□□ -0.77
PABPC1-207ENST00000518716 CFAP74Q9C0B2 1584 aa10.23□□□□□ -0.77
PABPC1-207ENST00000518716 SETD1BQ9UPS6 1966 aaKnown RBP10.23□□□□□ -0.77
PABPC1-207ENST00000518716 NKX2-3Q8TAU0 364 aa10.23□□□□□ -0.77
PABPC1-207ENST00000518716 SCAPERQ9BY12 1400 aa10.23□□□□□ -0.77
PABPC1-207ENST00000518716 CEBPAP49715 358 aaPredicted RBP10.22□□□□□ -0.77
PABPC1-207ENST00000518716 CAMK2BQ13554 666 aa10.22□□□□□ -0.77
PABPC1-207ENST00000518716 MLECQ14165 292 aa10.22□□□□□ -0.77
PABPC1-207ENST00000518716 FER1L4A9Z1Z3 1794 aa10.21□□□□□ -0.77
PABPC1-207ENST00000518716 C3orf80F5H4A9 247 aa10.21□□□□□ -0.77
PABPC1-207ENST00000518716 FAM198AQ9UFP1 575 aa10.21□□□□□ -0.77
PABPC1-207ENST00000518716 EN1Q05925 392 aaPredicted RBP10.2□□□□□ -0.78
PABPC1-207ENST00000518716 C9orf84Q5VXU9 1444 aa10.2□□□□□ -0.78
PABPC1-207ENST00000518716 PREX1Q8TCU6 1659 aa10.2□□□□□ -0.78
PABPC1-207ENST00000518716 PTPRTO14522 1441 aa10.19□□□□□ -0.78
PABPC1-207ENST00000518716 APLP1P51693 650 aa10.18□□□□□ -0.78
PABPC1-207ENST00000518716 TRIM67Q6ZTA4 783 aa10.18□□□□□ -0.78
PABPC1-207ENST00000518716 LTBP4Q8N2S1 1624 aa10.18□□□□□ -0.78
PABPC1-207ENST00000518716 MAP3K7O43318 606 aa10.17□□□□□ -0.78
PABPC1-207ENST00000518716 EFCAB2Q5VUJ9 269 aa10.17□□□□□ -0.78
PABPC1-207ENST00000518716 CDCA7LQ96GN5 454 aa10.17□□□□□ -0.78
PABPC1-207ENST00000518716 CDK13Q14004 1512 aaKnown RBP10.17□□□□□ -0.78
PABPC1-207ENST00000518716 POTECB2RU33 542 aa10.16□□□□□ -0.78
PABPC1-207ENST00000518716 NBR1Q14596 966 aa10.16□□□□□ -0.78
PABPC1-207ENST00000518716 AFAP1Q8N556 730 aa10.16□□□□□ -0.78
PABPC1-207ENST00000518716 KDM5CP41229 1560 aa10.15□□□□□ -0.78
PABPC1-207ENST00000518716 IQSEC2Q5JU85 1478 aa10.15□□□□□ -0.78
PABPC1-207ENST00000518716 UHRF1BP1Q6BDS2 1440 aa10.15□□□□□ -0.79
PABPC1-207ENST00000518716 REREQ9P2R6 1566 aa10.14□□□□□ -0.79
PABPC1-207ENST00000518716 PRSS12P56730 875 aa10.14□□□□□ -0.79
PABPC1-207ENST00000518716 ZNF518AQ6AHZ1 1483 aa10.13□□□□□ -0.79
PABPC1-207ENST00000518716 RANGAP1P46060 587 aaPredicted RBP10.13□□□□□ -0.79
PABPC1-207ENST00000518716 TATDN2Q93075 761 aa10.13□□□□□ -0.79
PABPC1-207ENST00000518716 EEA1Q15075 1411 aa10.13□□□□□ -0.79
PABPC1-207ENST00000518716 SPATA31D1Q6ZQQ2 1576 aa10.13□□□□□ -0.79
PABPC1-207ENST00000518716 AGLP35573 1532 aa10.12□□□□□ -0.79
PABPC1-207ENST00000518716 MLH3Q9UHC1 1453 aa10.12□□□□□ -0.79
PABPC1-207ENST00000518716 MYT1Q01538 1121 aa10.12□□□□□ -0.79
PABPC1-207ENST00000518716 NCOA1Q15788 1441 aa10.12□□□□□ -0.79
PABPC1-207ENST00000518716 TRAPPC8Q9Y2L5 1435 aa10.12□□□□□ -0.79
PABPC1-207ENST00000518716 DIP2CQ9Y2E4 1556 aa10.12□□□□□ -0.79
PABPC1-207ENST00000518716 RNF40O75150 1001 aa10.11□□□□□ -0.79
PABPC1-207ENST00000518716 EMID1Q96A84 441 aaPredicted RBP10.11□□□□□ -0.79
PABPC1-207ENST00000518716 PNMA3Q9UL41 463 aa10.11□□□□□ -0.79
PABPC1-207ENST00000518716 C3P01024 1663 aa10.1□□□□□ -0.79
PABPC1-207ENST00000518716 GGCXP38435 758 aa10.1□□□□□ -0.79
PABPC1-207ENST00000518716 PRIM1P49642 420 aaKnown RBP10.1□□□□□ -0.79
PABPC1-207ENST00000518716 COPS2P61201 443 aa10.1□□□□□ -0.79
PABPC1-207ENST00000518716 MYO5CQ9NQX4 1742 aa10.1□□□□□ -0.79
PABPC1-207ENST00000518716 KIF14Q15058 1648 aa10.09□□□□□ -0.79
PABPC1-207ENST00000518716 TMUB1Q9BVT8 246 aa10.09□□□□□ -0.79
PABPC1-207ENST00000518716 TROQ12816 1431 aaPredicted RBP10.08□□□□□ -0.8
PABPC1-207ENST00000518716 NBPF26B4DH59 902 aa10.08□□□□□ -0.8
PABPC1-207ENST00000518716 LCE2AQ5TA79 106 aaPredicted RBP10.08□□□□□ -0.8
PABPC1-207ENST00000518716 CDK11AQ9UQ88 783 aaPredicted RBP10.08□□□□□ -0.8
PABPC1-207ENST00000518716 ABCA6Q8N139 1617 aa10.07□□□□□ -0.8
PABPC1-207ENST00000518716 PKDCCQ504Y2 493 aa10.07□□□□□ -0.8
PABPC1-207ENST00000518716 NPATQ14207 1427 aa10.07□□□□□ -0.8
PABPC1-207ENST00000518716 FMN1Q68DA7 1419 aa10.07□□□□□ -0.8
PABPC1-207ENST00000518716 CNTLNQ9NXG0 1405 aa10.07□□□□□ -0.8
PABPC1-207ENST00000518716 ARHGAP35Q9NRY4 1499 aa10.06□□□□□ -0.8
PABPC1-207ENST00000518716 PDIA6Q15084 440 aa10.06□□□□□ -0.8
PABPC1-207ENST00000518716 DGAT1O75907 488 aa10.05□□□□□ -0.8
PABPC1-207ENST00000518716 SLC19A1P41440 591 aa10.05□□□□□ -0.8
PABPC1-207ENST00000518716 NUDT18Q6ZVK8 323 aa10.05□□□□□ -0.8
PABPC1-207ENST00000518716 ARHGAP5Q13017 1502 aa10.05□□□□□ -0.8
PABPC1-207ENST00000518716 CDC42BPBQ9Y5S2 1711 aa10.04□□□□□ -0.8
PABPC1-207ENST00000518716 ZMYM3Q14202 1370 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms