RNA–Protein interactions for RNA: ENST00000518537.5

PCM1-206, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-206ENST00000518537 SRPK2P78362 688 aaKnown RBP22.29■■□□□ 1.16
PCM1-206ENST00000518537 FKBP8Q14318 412 aa22.29■■□□□ 1.16
PCM1-206ENST00000518537 PLPPR3Q6T4P5 718 aa22.28■■□□□ 1.16
PCM1-206ENST00000518537 BCANQ96GW7 911 aa22.28■■□□□ 1.16
PCM1-206ENST00000518537 ABCC11Q96J66 1382 aa22.26■■□□□ 1.15
PCM1-206ENST00000518537 INSRP06213 1382 aa22.25■■□□□ 1.15
PCM1-206ENST00000518537 ANKRD36BQ8N2N9 1353 aa22.25■■□□□ 1.15
PCM1-206ENST00000518537 NINLQ9Y2I6 1382 aa22.25■■□□□ 1.15
PCM1-206ENST00000518537 USP32Q8NFA0 1604 aa22.25■■□□□ 1.15
PCM1-206ENST00000518537 ATAD2Q6PL18 1390 aa22.24■■□□□ 1.15
PCM1-206ENST00000518537 METP08581 1390 aa22.24■■□□□ 1.15
PCM1-206ENST00000518537 SENP3-EIF4A1A0A087X0R7 540 aa22.23■■□□□ 1.15
PCM1-206ENST00000518537 WAPLQ7Z5K2 1190 aa22.22■■□□□ 1.15
PCM1-206ENST00000518537 BLMP54132 1417 aaPredicted RBP22.21■■□□□ 1.15
PCM1-206ENST00000518537 SMG6Q86US8 1419 aaKnown RBP22.21■■□□□ 1.15
PCM1-206ENST00000518537 WDR43Q15061 677 aaKnown RBP eCLIP22.21■■□□□ 1.15
PCM1-206ENST00000518537 CDK19Q9BWU1 502 aa22.21■■□□□ 1.15
PCM1-206ENST00000518537 KNDC1Q76NI1 1749 aa22.21■■□□□ 1.15
PCM1-206ENST00000518537 CGNL1Q0VF96 1302 aa22.21■■□□□ 1.15
PCM1-206ENST00000518537 MORC1Q86VD1 984 aa22.21■■□□□ 1.15
PCM1-206ENST00000518537 PLEKHH1Q9ULM0 1364 aa22.19■■□□□ 1.14
PCM1-206ENST00000518537 PLEKHG1Q9ULL1 1385 aa22.19■■□□□ 1.14
PCM1-206ENST00000518537 TXNDC2Q86VQ3 553 aa22.19■■□□□ 1.14
PCM1-206ENST00000518537 EID1Q9Y6B2 187 aa22.19■■□□□ 1.14
PCM1-206ENST00000518537 NUDCQ9Y266 331 aa22.18■■□□□ 1.14
PCM1-206ENST00000518537 LTKP29376 864 aa22.18■■□□□ 1.14
PCM1-206ENST00000518537 ADAMTS8Q9UP79 889 aa22.17■■□□□ 1.14
PCM1-206ENST00000518537 TERF2IPQ9NYB0 399 aa22.16■■□□□ 1.14
PCM1-206ENST00000518537 ADAMTS13Q76LX8 1427 aa22.16■■□□□ 1.14
PCM1-206ENST00000518537 SIRT1Q96EB6 747 aa22.16■■□□□ 1.14
PCM1-206ENST00000518537 SLIT1O75093 1534 aa22.16■■□□□ 1.14
PCM1-206ENST00000518537 A0A1W2PP64 1363 aa22.16■■□□□ 1.14
PCM1-206ENST00000518537 NSD2O96028 1365 aa22.16■■□□□ 1.14
PCM1-206ENST00000518537 RIMS1Q86UR5 1692 aaKnown RBP22.15■■□□□ 1.14
PCM1-206ENST00000518537 TECPR2O15040 1411 aa22.15■■□□□ 1.14
PCM1-206ENST00000518537 FAM135BQ49AJ0 1406 aa22.15■■□□□ 1.14
PCM1-206ENST00000518537 CPS1P31327 1500 aa22.15■■□□□ 1.14
PCM1-206ENST00000518537 THEMISQ8N1K5 641 aaPredicted RBP22.15■■□□□ 1.14
PCM1-206ENST00000518537 SALL2Q9Y467 1007 aaPredicted RBP22.15■■□□□ 1.14
PCM1-206ENST00000518537 ARHGAP23Q9P227 1491 aa22.14■■□□□ 1.14
PCM1-206ENST00000518537 HDGFL2Q7Z4V5 671 aaPredicted RBP22.13■■□□□ 1.13
PCM1-206ENST00000518537 TNNT2P45379 298 aaPredicted RBP22.11■■□□□ 1.13
PCM1-206ENST00000518537 PDE3BQ13370 1112 aa22.11■■□□□ 1.13
PCM1-206ENST00000518537 CD163L1Q9NR16 1453 aa22.1■■□□□ 1.13
PCM1-206ENST00000518537 POLR3AO14802 1390 aaPredicted RBP22.1■■□□□ 1.13
PCM1-206ENST00000518537 WASLO00401 505 aaPredicted RBP22.1■■□□□ 1.13
PCM1-206ENST00000518537 CABP1Q9NZU7 370 aa22.1■■□□□ 1.13
PCM1-206ENST00000518537 MED14O60244 1454 aa22.08■■□□□ 1.13
PCM1-206ENST00000518537 SLC26A8Q96RN1 970 aa22.08■■□□□ 1.12
PCM1-206ENST00000518537 IRX6P78412 446 aaPredicted RBP22.07■■□□□ 1.12
PCM1-206ENST00000518537 CEP170BQ9Y4F5 1589 aaPredicted RBP22.07■■□□□ 1.12
PCM1-206ENST00000518537 ADAMTSL3P82987 1691 aa22.06■■□□□ 1.12
PCM1-206ENST00000518537 ATP7BP35670 1465 aa22.06■■□□□ 1.12
PCM1-206ENST00000518537 ANKRD26Q9UPS8 1709 aa22.05■■□□□ 1.12
PCM1-206ENST00000518537 ROBO2Q9HCK4 1378 aa22.05■■□□□ 1.12
PCM1-206ENST00000518537 TBX22Q9Y458 520 aa22.04■■□□□ 1.12
PCM1-206ENST00000518537 CFAP53Q96M91 514 aa22.04■■□□□ 1.12
PCM1-206ENST00000518537 GGNBP2Q9H3C7 697 aa22.04■■□□□ 1.12
PCM1-206ENST00000518537 DIP2AQ14689 1571 aa22.03■■□□□ 1.12
PCM1-206ENST00000518537 KIF20BQ96Q89 1820 aa22.03■■□□□ 1.12
PCM1-206ENST00000518537 MTHFSP49914 203 aa22.02■■□□□ 1.12
PCM1-206ENST00000518537 PELP1Q8IZL8 1130 aaKnown RBP22.02■■□□□ 1.12
PCM1-206ENST00000518537 PPIP5K1Q6PFW1 1433 aa22.02■■□□□ 1.12
PCM1-206ENST00000518537 PTPRUQ92729 1446 aa22.02■■□□□ 1.12
PCM1-206ENST00000518537 FYB1O15117 783 aa22.02■■□□□ 1.12
PCM1-206ENST00000518537 ERICH6BQ5W0A0 696 aa22.01■■□□□ 1.11
PCM1-206ENST00000518537 NUDT16Q96DE0 195 aaKnown RBP22.01■■□□□ 1.11
PCM1-206ENST00000518537 SHPRHQ149N8 1683 aa22.01■■□□□ 1.11
PCM1-206ENST00000518537 CCDC146Q8IYE0 955 aa22.01■■□□□ 1.11
PCM1-206ENST00000518537 ADGRB2O60241 1585 aa22■■□□□ 1.11
PCM1-206ENST00000518537 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.99■■□□□ 1.11
PCM1-206ENST00000518537 AMOTL2Q9Y2J4 779 aa21.99■■□□□ 1.11
PCM1-206ENST00000518537 CDCA7LQ96GN5 454 aa21.98■■□□□ 1.11
PCM1-206ENST00000518537 CCDC61Q9Y6R9 512 aa21.98■■□□□ 1.11
PCM1-206ENST00000518537 ZNF142P52746 1687 aaPredicted RBP21.97■■□□□ 1.11
PCM1-206ENST00000518537 CDC42BPGQ6DT37 1551 aa21.96■■□□□ 1.11
PCM1-206ENST00000518537 CPSF1Q10570 1443 aaKnown RBP21.96■■□□□ 1.11
PCM1-206ENST00000518537 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.96■■□□□ 1.112e-9■■□□□ 14.3
PCM1-206ENST00000518537 RNF123Q5XPI4 1314 aa21.95■■□□□ 1.11
PCM1-206ENST00000518537 EDC4Q6P2E9 1401 aaKnown RBP21.95■■□□□ 1.1
PCM1-206ENST00000518537 APAF1O14727 1248 aa21.94■■□□□ 1.1
PCM1-206ENST00000518537 ITSN1Q15811 1721 aa21.94■■□□□ 1.1
PCM1-206ENST00000518537 PTCH1Q13635 1447 aa21.94■■□□□ 1.1
PCM1-206ENST00000518537 PRR36Q9H6K5 1346 aa21.93■■□□□ 1.1
PCM1-206ENST00000518537 NCKAP5LQ9HCH0 1330 aa21.93■■□□□ 1.1
PCM1-206ENST00000518537 ANKLE2Q86XL3 938 aa21.92■■□□□ 1.1
PCM1-206ENST00000518537 AKAP12Q02952 1782 aa21.92■■□□□ 1.1
PCM1-206ENST00000518537 MON2Q7Z3U7 1717 aa21.92■■□□□ 1.1
PCM1-206ENST00000518537 NGEFQ8N5V2 710 aa21.92■■□□□ 1.1
PCM1-206ENST00000518537 RCAN3Q9UKA8 241 aa21.92■■□□□ 1.1
PCM1-206ENST00000518537 XRN1Q8IZH2 1706 aaKnown RBP21.91■■□□□ 1.1
PCM1-206ENST00000518537 ZNF521Q96K83 1311 aa21.91■■□□□ 1.1
PCM1-206ENST00000518537 SETD1BQ9UPS6 1966 aaKnown RBP21.91■■□□□ 1.1
PCM1-206ENST00000518537 GOLGA2Q08379 1002 aa21.9■■□□□ 1.1
PCM1-206ENST00000518537 PPP4R2Q9NY27 417 aa21.9■■□□□ 1.1
PCM1-206ENST00000518537 PIK3R4Q99570 1358 aa21.9■■□□□ 1.1
PCM1-206ENST00000518537 RUNDC1Q96C34 613 aa21.89■■□□□ 1.1
PCM1-206ENST00000518537 ZNF692Q9BU19 519 aaPredicted RBP21.89■■□□□ 1.1
PCM1-206ENST00000518537 TOPAZ1Q8N9V7 1692 aa21.89■■□□□ 1.1
PCM1-206ENST00000518537 NUTM2FA1L443 756 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms