RNA–Protein interactions for RNA: ENST00000517990.5

PABPC1-204, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-204ENST00000517990 KDM5AP29375 1690 aaKnown RBP9.74□□□□□ -0.85
PABPC1-204ENST00000517990 ROBO1Q9Y6N7 1651 aa9.74□□□□□ -0.85
PABPC1-204ENST00000517990 PRDM15P57071 1507 aaPredicted RBP9.73□□□□□ -0.85
PABPC1-204ENST00000517990 EFCAB6Q5THR3 1501 aa9.73□□□□□ -0.85
PABPC1-204ENST00000517990 HDGFP51858 240 aaKnown RBP9.73□□□□□ -0.85
PABPC1-204ENST00000517990 C3orf67Q6ZVT6 689 aa9.73□□□□□ -0.85
PABPC1-204ENST00000517990 NKTRP30414 1462 aaKnown RBP9.72□□□□□ -0.85
PABPC1-204ENST00000517990 PIK3C2BO00750 1634 aa9.72□□□□□ -0.85
PABPC1-204ENST00000517990 JCADQ9P266 1359 aa9.72□□□□□ -0.85
PABPC1-204ENST00000517990 MEX3CQ5U5Q3 659 aaKnown RBP9.71□□□□□ -0.86
PABPC1-204ENST00000517990 RASEFQ8IZ41 740 aa9.71□□□□□ -0.86
PABPC1-204ENST00000517990 RRP7BPQ9NSQ0 103 aa9.71□□□□□ -0.86
PABPC1-204ENST00000517990 SPDYE4A6NLX3 237 aa9.7□□□□□ -0.86
PABPC1-204ENST00000517990 ZNF772Q68DY9 489 aaPredicted RBP9.7□□□□□ -0.86
PABPC1-204ENST00000517990 SLC26A8Q96RN1 970 aa9.7□□□□□ -0.86
PABPC1-204ENST00000517990 SLC52A1Q9NWF4 448 aa9.7□□□□□ -0.86
PABPC1-204ENST00000517990 SLAIN2Q9P270 581 aa9.7□□□□□ -0.86
PABPC1-204ENST00000517990 VPS8Q8N3P4 1428 aa9.7□□□□□ -0.86
PABPC1-204ENST00000517990 PHLPP1O60346 1717 aa9.7□□□□□ -0.86
PABPC1-204ENST00000517990 PPP1R15AO75807 674 aaPredicted RBP9.69□□□□□ -0.86
PABPC1-204ENST00000517990 ERBB3P21860 1342 aa9.69□□□□□ -0.86
PABPC1-204ENST00000517990 MAP3K1Q13233 1512 aa9.69□□□□□ -0.86
PABPC1-204ENST00000517990 IDI1Q13907 227 aa9.69□□□□□ -0.86
PABPC1-204ENST00000517990 IFNL1Q8IU54 200 aa9.69□□□□□ -0.86
PABPC1-204ENST00000517990 PLA2G2EQ9NZK7 142 aa9.69□□□□□ -0.86
PABPC1-204ENST00000517990 ANKRD30AQ9BXX3 1397 aa9.68□□□□□ -0.86
PABPC1-204ENST00000517990 SPATA31A6Q5VVP1 1343 aa9.68□□□□□ -0.86
PABPC1-204ENST00000517990 PTGER2P43116 358 aa9.68□□□□□ -0.86
PABPC1-204ENST00000517990 C14orf37Q86TY3 774 aa9.68□□□□□ -0.86
PABPC1-204ENST00000517990 TET3O43151 1660 aa9.67□□□□□ -0.86
PABPC1-204ENST00000517990 NWD1Q149M9 1564 aa9.67□□□□□ -0.86
PABPC1-204ENST00000517990 ADGRB3O60242 1522 aa9.67□□□□□ -0.86
PABPC1-204ENST00000517990 LMTK2Q8IWU2 1503 aa9.67□□□□□ -0.86
PABPC1-204ENST00000517990 RBM33Q96EV2 1170 aaKnown RBP9.67□□□□□ -0.86
PABPC1-204ENST00000517990 CROCC2H7BZ55 1655 aa9.67□□□□□ -0.86
PABPC1-204ENST00000517990 ABCC5O15440 1437 aa9.66□□□□□ -0.86
PABPC1-204ENST00000517990 FGD6Q6ZV73 1430 aa9.66□□□□□ -0.86
PABPC1-204ENST00000517990 NCOA3Q9Y6Q9 1424 aa9.66□□□□□ -0.86
PABPC1-204ENST00000517990 CADPS2Q86UW7 1296 aa9.66□□□□□ -0.86
PABPC1-204ENST00000517990 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.66□□□□□ -0.86
PABPC1-204ENST00000517990 DAPK1P53355 1430 aa9.65□□□□□ -0.86
PABPC1-204ENST00000517990 SETD1AO15047 1707 aaKnown RBP9.65□□□□□ -0.86
PABPC1-204ENST00000517990 PTPN23Q9H3S7 1636 aa9.65□□□□□ -0.86
PABPC1-204ENST00000517990 ATF3P18847 181 aa9.65□□□□□ -0.86
PABPC1-204ENST00000517990 KANK4Q5T7N3 995 aaPredicted RBP9.65□□□□□ -0.86
PABPC1-204ENST00000517990 NOS1P29475 1434 aa9.65□□□□□ -0.87
PABPC1-204ENST00000517990 PLEKHG1Q9ULL1 1385 aa9.64□□□□□ -0.87
PABPC1-204ENST00000517990 RXRBP28702 533 aa9.64□□□□□ -0.87
PABPC1-204ENST00000517990 TRIM52Q96A61 297 aa9.64□□□□□ -0.87
PABPC1-204ENST00000517990 RPRD2Q5VT52 1461 aaKnown RBP9.64□□□□□ -0.87
PABPC1-204ENST00000517990 UPF1Q92900 1129 aaKnown RBP eCLIP9.63□□□□□ -0.87
PABPC1-204ENST00000517990 TBX22Q9Y458 520 aa9.63□□□□□ -0.87
PABPC1-204ENST00000517990 CHD2O14647 1828 aaKnown RBP9.63□□□□□ -0.87
PABPC1-204ENST00000517990 C19orf44Q9H6X5 657 aa9.62□□□□□ -0.87
PABPC1-204ENST00000517990 CHIC2Q9UKJ5 165 aa9.62□□□□□ -0.87
PABPC1-204ENST00000517990 COL16A1Q07092 1604 aaPredicted RBP9.62□□□□□ -0.87
PABPC1-204ENST00000517990 RIMS2Q9UQ26 1411 aa9.62□□□□□ -0.87
PABPC1-204ENST00000517990 PIK3R4Q99570 1358 aa9.62□□□□□ -0.87
PABPC1-204ENST00000517990 CHGAP10645 457 aaKnown RBP9.61□□□□□ -0.87
PABPC1-204ENST00000517990 HOXB1P14653 301 aaPredicted RBP9.61□□□□□ -0.87
PABPC1-204ENST00000517990 AHDC1Q5TGY3 1603 aaPredicted RBP9.6□□□□□ -0.87
PABPC1-204ENST00000517990 DIP2AQ14689 1571 aa9.6□□□□□ -0.87
PABPC1-204ENST00000517990 ZFYVE9O95405 1425 aa9.6□□□□□ -0.87
PABPC1-204ENST00000517990 SHPRHQ149N8 1683 aa9.6□□□□□ -0.87
PABPC1-204ENST00000517990 CDK12Q9NYV4 1490 aaPredicted RBP9.59□□□□□ -0.87
PABPC1-204ENST00000517990 NUTM2BA6NNL0 878 aaPredicted RBP9.59□□□□□ -0.87
PABPC1-204ENST00000517990 NUTM2EB1AL46 878 aaPredicted RBP9.59□□□□□ -0.87
PABPC1-204ENST00000517990 NUTM2AQ8IVF1 878 aaPredicted RBP9.59□□□□□ -0.87
PABPC1-204ENST00000517990 GCC2Q8IWJ2 1684 aa9.58□□□□□ -0.88
PABPC1-204ENST00000517990 LRP6O75581 1613 aa9.58□□□□□ -0.88
PABPC1-204ENST00000517990 L3MBTL3Q96JM7 780 aaPredicted RBP9.58□□□□□ -0.88
PABPC1-204ENST00000517990 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.58□□□□□ -0.88
PABPC1-204ENST00000517990 ANKRD50Q9ULJ7 1429 aa9.57□□□□□ -0.88
PABPC1-204ENST00000517990 TMEM131LA2VDJ0 1609 aa9.57□□□□□ -0.88
PABPC1-204ENST00000517990 MYO5BQ9ULV0 1848 aa9.57□□□□□ -0.88
PABPC1-204ENST00000517990 VARS2Q5ST30 1063 aaKnown RBP9.57□□□□□ -0.88
PABPC1-204ENST00000517990 ZNF710Q8N1W2 664 aa9.57□□□□□ -0.88
PABPC1-204ENST00000517990 ADGRL2O95490 1459 aa9.57□□□□□ -0.88
PABPC1-204ENST00000517990 AFF2P51816 1311 aa9.56□□□□□ -0.88
PABPC1-204ENST00000517990 DCCP43146 1447 aa9.56□□□□□ -0.88
PABPC1-204ENST00000517990 TRPM2O94759 1503 aa9.56□□□□□ -0.88
PABPC1-204ENST00000517990 FAM50AQ14320 339 aaKnown RBP9.56□□□□□ -0.88
PABPC1-204ENST00000517990 LRRC59Q96AG4 307 aaKnown RBP9.56□□□□□ -0.88
PABPC1-204ENST00000517990 AMOTL2Q9Y2J4 779 aa9.56□□□□□ -0.88
PABPC1-204ENST00000517990 HOXB3P14651 431 aaPredicted RBP9.55□□□□□ -0.88
PABPC1-204ENST00000517990 RBM6P78332 1123 aaKnown RBP9.55□□□□□ -0.88
PABPC1-204ENST00000517990 BRINP3Q76B58 766 aa9.55□□□□□ -0.88
PABPC1-204ENST00000517990 NGLY1Q96IV0 654 aa9.55□□□□□ -0.88
PABPC1-204ENST00000517990 NUTM2DQ5VT03 806 aaPredicted RBP9.54□□□□□ -0.88
PABPC1-204ENST00000517990 ADAMTS13Q76LX8 1427 aa9.54□□□□□ -0.88
PABPC1-204ENST00000517990 SETD5Q9C0A6 1442 aa9.54□□□□□ -0.88
PABPC1-204ENST00000517990 LOC105371045A0A1W2PR82 267 aa9.53□□□□□ -0.88
PABPC1-204ENST00000517990 C8orf37Q96NL8 207 aa9.53□□□□□ -0.88
PABPC1-204ENST00000517990 QTRT2Q9H974 415 aaKnown RBP9.53□□□□□ -0.88
PABPC1-204ENST00000517990 ASXL1Q8IXJ9 1541 aa9.52□□□□□ -0.88
PABPC1-204ENST00000517990 PLEKHG5O94827 1062 aa9.52□□□□□ -0.89
PABPC1-204ENST00000517990 PDCD7Q8N8D1 485 aaKnown RBP9.52□□□□□ -0.89
PABPC1-204ENST00000517990 ATAD2Q6PL18 1390 aa9.51□□□□□ -0.89
PABPC1-204ENST00000517990 ZNF687Q8N1G0 1237 aa9.51□□□□□ -0.89
PABPC1-204ENST00000517990 UNC13BO14795 1591 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms