RNA–Protein interactions for RNA: ENST00000517730.5

PCM1-204, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-204ENST00000517730 GZF1Q9H116 711 aaPredicted RBP19.25■□□□□ 0.67
PCM1-204ENST00000517730 ERVK-7P63135 1459 aa19.25■□□□□ 0.67
PCM1-204ENST00000517730 IQSEC2Q5JU85 1478 aa19.25■□□□□ 0.67
PCM1-204ENST00000517730 RLBP1P12271 317 aa19.25■□□□□ 0.67
PCM1-204ENST00000517730 NCBP3Q53F19 620 aaKnown RBP19.24■□□□□ 0.67
PCM1-204ENST00000517730 ARXQ96QS3 562 aa19.24■□□□□ 0.67
PCM1-204ENST00000517730 CARD14Q9BXL6 1004 aa19.24■□□□□ 0.67
PCM1-204ENST00000517730 MYH16Q9H6N6 1097 aa19.24■□□□□ 0.67
PCM1-204ENST00000517730 CCDC27Q2M243 656 aa19.23■□□□□ 0.67
PCM1-204ENST00000517730 HSP90AA2PQ14568 343 aaPredicted RBP19.23■□□□□ 0.67
PCM1-204ENST00000517730 NEURL4Q96JN8 1562 aa19.23■□□□□ 0.67
PCM1-204ENST00000517730 GRPEL1Q9HAV7 217 aa19.23■□□□□ 0.67
PCM1-204ENST00000517730 HSCBQ8IWL3 235 aa19.22■□□□□ 0.67
PCM1-204ENST00000517730 SHPRHQ149N8 1683 aa19.22■□□□□ 0.67
PCM1-204ENST00000517730 MVPQ14764 893 aaKnown RBP19.22■□□□□ 0.67
PCM1-204ENST00000517730 SPRYD3Q8NCJ5 442 aa19.22■□□□□ 0.67
PCM1-204ENST00000517730 CLTCL1P53675 1640 aa19.22■□□□□ 0.67
PCM1-204ENST00000517730 TCP11L2Q8N4U5 519 aa19.2■□□□□ 0.66
PCM1-204ENST00000517730 NCOA3Q9Y6Q9 1424 aa19.2■□□□□ 0.66
PCM1-204ENST00000517730 ESPNB1AK53 854 aa19.19■□□□□ 0.66
PCM1-204ENST00000517730 MFAP1P55081 439 aaKnown RBP19.19■□□□□ 0.66
PCM1-204ENST00000517730 PKNOX2Q96KN3 472 aa19.19■□□□□ 0.66
PCM1-204ENST00000517730 SBNO2Q9Y2G9 1366 aa19.19■□□□□ 0.66
PCM1-204ENST00000517730 CT47B1P0C2W7 299 aaPredicted RBP19.18■□□□□ 0.66
PCM1-204ENST00000517730 PTMSP20962 102 aa19.18■□□□□ 0.66
PCM1-204ENST00000517730 ZKSCAN2Q63HK3 967 aa19.18■□□□□ 0.66
PCM1-204ENST00000517730 ZNF692Q9BU19 519 aaPredicted RBP19.18■□□□□ 0.66
PCM1-204ENST00000517730 TNNQ9UQP3 1299 aa19.18■□□□□ 0.66
PCM1-204ENST00000517730 MYOM2P54296 1465 aa19.17■□□□□ 0.66
PCM1-204ENST00000517730 HDAC1Q13547 482 aaPredicted RBP19.17■□□□□ 0.66
PCM1-204ENST00000517730 NEUROD2Q15784 382 aa19.17■□□□□ 0.66
PCM1-204ENST00000517730 SHROOM2Q13796 1616 aa19.17■□□□□ 0.66
PCM1-204ENST00000517730 CIZ1Q9ULV3 898 aaPredicted RBP19.17■□□□□ 0.66
PCM1-204ENST00000517730 DDIT3P35638 169 aa19.16■□□□□ 0.66
PCM1-204ENST00000517730 MORC1Q86VD1 984 aa19.16■□□□□ 0.66
PCM1-204ENST00000517730 SNX21Q969T3 373 aa19.16■□□□□ 0.66
PCM1-204ENST00000517730 SKOR2Q2VWA4 1001 aaPredicted RBP19.16■□□□□ 0.66
PCM1-204ENST00000517730 DZIP1LQ8IYY4 767 aaKnown RBP19.16■□□□□ 0.66
PCM1-204ENST00000517730 RRP7AQ9Y3A4 280 aaKnown RBP19.16■□□□□ 0.66
PCM1-204ENST00000517730 MYO3AQ8NEV4 1616 aa19.16■□□□□ 0.66
PCM1-204ENST00000517730 FTSJ3Q8IY81 847 aaKnown RBP19.15■□□□□ 0.66
PCM1-204ENST00000517730 BCL2L13Q9BXK5 485 aa19.15■□□□□ 0.66
PCM1-204ENST00000517730 MAP3K4Q9Y6R4 1608 aa19.15■□□□□ 0.66
PCM1-204ENST00000517730 TRIM44Q96DX7 344 aaPredicted RBP19.15■□□□□ 0.66
PCM1-204ENST00000517730 TET3O43151 1660 aa19.15■□□□□ 0.66
PCM1-204ENST00000517730 GBP4Q96PP9 640 aa19.14■□□□□ 0.65
PCM1-204ENST00000517730 PLCH2O75038 1416 aa19.13■□□□□ 0.65
PCM1-204ENST00000517730 RBM25P49756 843 aaKnown RBP19.13■□□□□ 0.65
PCM1-204ENST00000517730 CFAP53Q96M91 514 aa19.13■□□□□ 0.65
PCM1-204ENST00000517730 ABCA6Q8N139 1617 aa19.12■□□□□ 0.65
PCM1-204ENST00000517730 SMC5Q8IY18 1101 aa19.12■□□□□ 0.65
PCM1-204ENST00000517730 DEPDC5O75140 1603 aa19.12■□□□□ 0.65
PCM1-204ENST00000517730 ABCC1P33527 1531 aa19.12■□□□□ 0.65
PCM1-204ENST00000517730 NSD3Q9BZ95 1437 aa19.12■□□□□ 0.65
PCM1-204ENST00000517730 ADGRL1O94910 1474 aa19.12■□□□□ 0.65
PCM1-204ENST00000517730 TPM2P07951 284 aa19.12■□□□□ 0.65
PCM1-204ENST00000517730 EFCAB2Q5VUJ9 269 aa19.12■□□□□ 0.65
PCM1-204ENST00000517730 DDX19BQ9UMR2 479 aa19.12■□□□□ 0.65
PCM1-204ENST00000517730 ZNF518AQ6AHZ1 1483 aa19.11■□□□□ 0.65
PCM1-204ENST00000517730 CFAP70Q5T0N1 1121 aa19.11■□□□□ 0.65
PCM1-204ENST00000517730 VSIG10Q8N0Z9 540 aa19.11■□□□□ 0.65
PCM1-204ENST00000517730 USP32Q8NFA0 1604 aa19.1■□□□□ 0.65
PCM1-204ENST00000517730 TNPO1Q92973 898 aaKnown RBP19.09■□□□□ 0.65
PCM1-204ENST00000517730 ERBB4Q15303 1308 aa19.09■□□□□ 0.65
PCM1-204ENST00000517730 RAB3GAP1Q15042 981 aa19.08■□□□□ 0.64
PCM1-204ENST00000517730 TRAPPC8Q9Y2L5 1435 aa19.07■□□□□ 0.64
PCM1-204ENST00000517730 ZMYND15Q9H091 742 aa19.07■□□□□ 0.64
PCM1-204ENST00000517730 ADGRB2O60241 1585 aa19.07■□□□□ 0.64
PCM1-204ENST00000517730 SPAG9O60271 1321 aaKnown RBP19.06■□□□□ 0.64
PCM1-204ENST00000517730 VWDEQ8N2E2 1590 aa19.06■□□□□ 0.64
PCM1-204ENST00000517730 HSP90AB1P08238 724 aaKnown RBP19.06■□□□□ 0.64
PCM1-204ENST00000517730 SMC4Q9NTJ3 1288 aa19.06■□□□□ 0.64
PCM1-204ENST00000517730 NRXN1Q9ULB1 1477 aa19.05■□□□□ 0.64
PCM1-204ENST00000517730 MTHFSP49914 203 aa19.05■□□□□ 0.64
PCM1-204ENST00000517730 TRIM27P14373 513 aa19.05■□□□□ 0.64
PCM1-204ENST00000517730 CCDC173Q0VFZ6 552 aa19.05■□□□□ 0.64
PCM1-204ENST00000517730 SETBP1Q9Y6X0 1596 aa19.04■□□□□ 0.64
PCM1-204ENST00000517730 ADGRF5Q8IZF2 1346 aa19.04■□□□□ 0.64
PCM1-204ENST00000517730 TNNT2P45379 298 aaPredicted RBP19.04■□□□□ 0.64
PCM1-204ENST00000517730 ATF7IPQ6VMQ6 1270 aa19.04■□□□□ 0.64
PCM1-204ENST00000517730 GAS2L3Q86XJ1 694 aa19.04■□□□□ 0.64
PCM1-204ENST00000517730 ZFYVE16Q7Z3T8 1539 aa19.04■□□□□ 0.64
PCM1-204ENST00000517730 ITPRIPQ8IWB1 547 aa19.03■□□□□ 0.64
PCM1-204ENST00000517730 IFT172Q9UG01 1749 aa19.03■□□□□ 0.64
PCM1-204ENST00000517730 NSD2O96028 1365 aa19.02■□□□□ 0.64
PCM1-204ENST00000517730 NUCB1Q02818 461 aa19.02■□□□□ 0.64
PCM1-204ENST00000517730 PPP1R9BQ96SB3 815 aa19.02■□□□□ 0.64
PCM1-204ENST00000517730 IBTKQ9P2D0 1353 aaPredicted RBP19.01■□□□□ 0.63
PCM1-204ENST00000517730 KIF1BO60333 1816 aa19.01■□□□□ 0.63
PCM1-204ENST00000517730 KIF16BQ96L93 1317 aa19■□□□□ 0.63
PCM1-204ENST00000517730 GOLGA6L22H0YM25 854 aa19■□□□□ 0.63
PCM1-204ENST00000517730 ANP32BQ92688 251 aaKnown RBP19■□□□□ 0.63
PCM1-204ENST00000517730 PDCL3Q9H2J4 239 aa19■□□□□ 0.63
PCM1-204ENST00000517730 ZBTB40Q9NUA8 1239 aa19■□□□□ 0.63
PCM1-204ENST00000517730 U2AF1L5P0DN76 240 aaPredicted RBP19■□□□□ 0.63
PCM1-204ENST00000517730 U2AF1Q01081 240 aaKnown RBP eCLIP19■□□□□ 0.633e-6■■■■□ 23.1
PCM1-204ENST00000517730 BMP2KLQ5H9B9 411 aa19■□□□□ 0.63
PCM1-204ENST00000517730 ABCC11Q96J66 1382 aa19■□□□□ 0.63
PCM1-204ENST00000517730 ZC3H13Q5T200 1668 aaKnown RBP18.99■□□□□ 0.63
PCM1-204ENST00000517730 EXOSC9Q06265 439 aaKnown RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms