RNA–Protein interactions for RNA: ENST00000516680.1

RNU6-197P-201, Transcript of RNA, U6 small nuclear 197, pseudogene, humanhuman

BASIC

Gene RNU6-197P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-197P-201ENST00000516680 PLCB2Q00722 1185 aa4.65□□□□□ -1.67
RNU6-197P-201ENST00000516680 C11orf95C9JLR9 678 aaPredicted RBP4.64□□□□□ -1.67
RNU6-197P-201ENST00000516680 SMPD1P17405 629 aa4.64□□□□□ -1.67
RNU6-197P-201ENST00000516680 SMCPP49901 116 aaPredicted RBP4.64□□□□□ -1.67
RNU6-197P-201ENST00000516680 TRIM32Q13049 653 aa4.64□□□□□ -1.67
RNU6-197P-201ENST00000516680 CTC1Q2NKJ3 1217 aa4.64□□□□□ -1.67
RNU6-197P-201ENST00000516680 HLA-CQ95604 372 aa4.64□□□□□ -1.67
RNU6-197P-201ENST00000516680 WNT7AO00755 349 aa4.63□□□□□ -1.67
RNU6-197P-201ENST00000516680 MMP16P51512 607 aa4.63□□□□□ -1.67
RNU6-197P-201ENST00000516680 GRIPAP1Q4V328 841 aa4.63□□□□□ -1.67
RNU6-197P-201ENST00000516680 J3QL48 77 aa4.62□□□□□ -1.67
RNU6-197P-201ENST00000516680 Q3C1V9 767 aa4.62□□□□□ -1.67
RNU6-197P-201ENST00000516680 SNIP1Q8TAD8 396 aaKnown RBP4.62□□□□□ -1.67
RNU6-197P-201ENST00000516680 MRGPRX2Q96LB1 330 aa4.62□□□□□ -1.67
RNU6-197P-201ENST00000516680 USB1Q9BQ65 265 aaKnown RBP4.62□□□□□ -1.67
RNU6-197P-201ENST00000516680 KDM4AO75164 1064 aa4.61□□□□□ -1.67
RNU6-197P-201ENST00000516680 WFS1O76024 890 aa4.61□□□□□ -1.67
RNU6-197P-201ENST00000516680 DXOO77932 396 aaKnown RBP4.61□□□□□ -1.67
RNU6-197P-201ENST00000516680 MDM2Q00987 491 aaPredicted RBP4.61□□□□□ -1.67
RNU6-197P-201ENST00000516680 GUCA2AQ02747 115 aa4.61□□□□□ -1.67
RNU6-197P-201ENST00000516680 NFX1Q12986 1120 aaKnown RBP4.61□□□□□ -1.67
RNU6-197P-201ENST00000516680 MAP2K5Q13163 448 aa4.61□□□□□ -1.67
RNU6-197P-201ENST00000516680 CCDC24Q8N4L8 307 aa4.61□□□□□ -1.67
RNU6-197P-201ENST00000516680 ATP13A2Q9NQ11 1180 aa4.61□□□□□ -1.67
RNU6-197P-201ENST00000516680 SNRPBP14678 240 aaKnown RBP4.6□□□□□ -1.67
RNU6-197P-201ENST00000516680 SKOR1P84550 965 aa4.6□□□□□ -1.67
RNU6-197P-201ENST00000516680 LCE2CQ5TA81 110 aa4.6□□□□□ -1.67
RNU6-197P-201ENST00000516680 HPS1Q92902 700 aa4.6□□□□□ -1.67
RNU6-197P-201ENST00000516680 KDM2AQ9Y2K7 1162 aa4.6□□□□□ -1.67
RNU6-197P-201ENST00000516680 IRF6O14896 467 aa4.59□□□□□ -1.67
RNU6-197P-201ENST00000516680 HOXA2O43364 376 aa4.59□□□□□ -1.67
RNU6-197P-201ENST00000516680 HAP1P54257 671 aaPredicted RBP4.59□□□□□ -1.67
RNU6-197P-201ENST00000516680 RC3H1Q5TC82 1133 aaKnown RBP4.59□□□□□ -1.67
RNU6-197P-201ENST00000516680 SYMPKQ92797 1274 aaKnown RBP4.59□□□□□ -1.67
RNU6-197P-201ENST00000516680 CCDC102AQ96A19 550 aa4.58□□□□□ -1.68
RNU6-197P-201ENST00000516680 TRIM47Q96LD4 638 aa4.58□□□□□ -1.68
RNU6-197P-201ENST00000516680 REPIN1Q9BWE0 567 aaKnown RBP4.58□□□□□ -1.68
RNU6-197P-201ENST00000516680 WIPF1O43516 503 aa4.57□□□□□ -1.68
RNU6-197P-201ENST00000516680 USP46P62068 366 aa4.57□□□□□ -1.68
RNU6-197P-201ENST00000516680 TERTO14746 1132 aaKnown RBP4.56□□□□□ -1.68
RNU6-197P-201ENST00000516680 JUNDP17535 347 aa4.56□□□□□ -1.68
RNU6-197P-201ENST00000516680 WNT7BP56706 349 aa4.56□□□□□ -1.68
RNU6-197P-201ENST00000516680 PTCRAQ6ISU1 281 aaPredicted RBP4.56□□□□□ -1.68
RNU6-197P-201ENST00000516680 FAM217BQ9NTX9 383 aaPredicted RBP4.56□□□□□ -1.68
RNU6-197P-201ENST00000516680 MINK1Q8N4C8 1332 aaPredicted RBP4.55□□□□□ -1.68
RNU6-197P-201ENST00000516680 ALDH1A1P00352 501 aa4.55□□□□□ -1.68
RNU6-197P-201ENST00000516680 BMP1P13497 986 aa4.55□□□□□ -1.68
RNU6-197P-201ENST00000516680 NUDT12Q9BQG2 462 aa4.55□□□□□ -1.68
RNU6-197P-201ENST00000516680 SENP2Q9HC62 589 aa4.55□□□□□ -1.68
RNU6-197P-201ENST00000516680 GPCPD1Q9NPB8 672 aa4.55□□□□□ -1.68
RNU6-197P-201ENST00000516680 SIAH2O43255 324 aa4.54□□□□□ -1.68
RNU6-197P-201ENST00000516680 RETREG3Q86VR2 466 aa4.54□□□□□ -1.68
RNU6-197P-201ENST00000516680 PCDHGC3Q9UN70 934 aa4.54□□□□□ -1.68
RNU6-197P-201ENST00000516680 FDX1P10109 184 aa4.53□□□□□ -1.68
RNU6-197P-201ENST00000516680 CLCN1P35523 988 aa4.53□□□□□ -1.68
RNU6-197P-201ENST00000516680 INSM1Q01101 510 aaPredicted RBP4.53□□□□□ -1.68
RNU6-197P-201ENST00000516680 TRIM46Q7Z4K8 759 aa4.53□□□□□ -1.68
RNU6-197P-201ENST00000516680 NUTM1Q86Y26 1132 aa4.53□□□□□ -1.68
RNU6-197P-201ENST00000516680 EHBP1Q8NDI1 1231 aa4.53□□□□□ -1.68
RNU6-197P-201ENST00000516680 KIFC2Q96AC6 838 aa4.53□□□□□ -1.68
RNU6-197P-201ENST00000516680 STK17AQ9UEE5 414 aa4.53□□□□□ -1.68
RNU6-197P-201ENST00000516680 C6orf229H3BNL8 230 aa4.52□□□□□ -1.69
RNU6-197P-201ENST00000516680 SH3BP2P78314 561 aa4.52□□□□□ -1.69
RNU6-197P-201ENST00000516680 LINC01559Q495D7 138 aa4.52□□□□□ -1.69
RNU6-197P-201ENST00000516680 TULP1O00294 542 aaPredicted RBP4.51□□□□□ -1.69
RNU6-197P-201ENST00000516680 CAPN5O15484 640 aaPredicted RBP4.51□□□□□ -1.69
RNU6-197P-201ENST00000516680 CCNYL3P0C7X3 344 aa4.51□□□□□ -1.69
RNU6-197P-201ENST00000516680 NDUFV2P19404 249 aa4.51□□□□□ -1.69
RNU6-197P-201ENST00000516680 TLL2Q9Y6L7 1015 aa4.51□□□□□ -1.69
RNU6-197P-201ENST00000516680 WASF2Q9Y6W5 498 aa4.51□□□□□ -1.69
RNU6-197P-201ENST00000516680 MS4A1P11836 297 aa4.5□□□□□ -1.69
RNU6-197P-201ENST00000516680 SSTR3P32745 418 aaPredicted RBP4.5□□□□□ -1.69
RNU6-197P-201ENST00000516680 VEGFBP49765 207 aa4.5□□□□□ -1.69
RNU6-197P-201ENST00000516680 KRI1Q8N9T8 703 aaKnown RBP4.5□□□□□ -1.69
RNU6-197P-201ENST00000516680 SPIRE2Q8WWL2 714 aa4.5□□□□□ -1.69
RNU6-197P-201ENST00000516680 UNC93B1Q9H1C4 597 aa4.5□□□□□ -1.69
RNU6-197P-201ENST00000516680 NXF1Q9UBU9 619 aaKnown RBP4.5□□□□□ -1.69
RNU6-197P-201ENST00000516680 MOXD2PA6NHM9 499 aa4.49□□□□□ -1.69
RNU6-197P-201ENST00000516680 PTPRNQ16849 979 aa4.49□□□□□ -1.69
RNU6-197P-201ENST00000516680 BAP1Q92560 729 aa4.49□□□□□ -1.69
RNU6-197P-201ENST00000516680 LORP23490 312 aaPredicted RBP4.48□□□□□ -1.69
RNU6-197P-201ENST00000516680 GMPRP36959 345 aa4.48□□□□□ -1.69
RNU6-197P-201ENST00000516680 PRR7Q8TB68 274 aa4.48□□□□□ -1.69
RNU6-197P-201ENST00000516680 SLC16A10Q8TF71 515 aa4.48□□□□□ -1.69
RNU6-197P-201ENST00000516680 ZFP42Q96MM3 310 aa4.48□□□□□ -1.69
RNU6-197P-201ENST00000516680 EVA1BQ9NVM1 165 aa4.48□□□□□ -1.69
RNU6-197P-201ENST00000516680 KCNH2Q12809 1159 aa4.47□□□□□ -1.69
RNU6-197P-201ENST00000516680 TTLL12Q14166 644 aaPredicted RBP4.47□□□□□ -1.69
RNU6-197P-201ENST00000516680 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.47□□□□□ -1.69
RNU6-197P-201ENST00000516680 ZNF511Q8NB15 262 aa4.47□□□□□ -1.69
RNU6-197P-201ENST00000516680 ERBB4Q15303 1308 aa4.46□□□□□ -1.69
RNU6-197P-201ENST00000516680 H3BM21 787 aa4.46□□□□□ -1.7
RNU6-197P-201ENST00000516680 NNTQ13423 1086 aa4.46□□□□□ -1.7
RNU6-197P-201ENST00000516680 MTMR2Q13614 643 aa4.46□□□□□ -1.7
RNU6-197P-201ENST00000516680 GIGYF2Q6Y7W6 1299 aaKnown RBP4.46□□□□□ -1.7
RNU6-197P-201ENST00000516680 VSIG10Q8N0Z9 540 aa4.46□□□□□ -1.7
RNU6-197P-201ENST00000516680 IRF7Q92985 503 aa4.46□□□□□ -1.7
RNU6-197P-201ENST00000516680 SOBPA7XYQ1 873 aa4.45□□□□□ -1.7
RNU6-197P-201ENST00000516680 TIMP2P16035 220 aa4.45□□□□□ -1.7
RNU6-197P-201ENST00000516680 VARSP26640 1264 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms