RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 ITSN2Q9NZM3 1697 aa3.4□□□□□ -1.86
SCARNA16.3-201ENST00000516595 GPR37O15354 613 aa3.4□□□□□ -1.87
SCARNA16.3-201ENST00000516595 OATP04181 439 aa3.4□□□□□ -1.87
SCARNA16.3-201ENST00000516595 TTC37Q6PGP7 1564 aa3.4□□□□□ -1.87
SCARNA16.3-201ENST00000516595 CD109Q6YHK3 1445 aa3.4□□□□□ -1.87
SCARNA16.3-201ENST00000516595 CDCA7LQ96GN5 454 aa3.4□□□□□ -1.87
SCARNA16.3-201ENST00000516595 KCNK17Q96T54 332 aa3.4□□□□□ -1.87
SCARNA16.3-201ENST00000516595 PLEKHH2Q8IVE3 1493 aa3.4□□□□□ -1.87
SCARNA16.3-201ENST00000516595 KIF13AQ9H1H9 1805 aa3.4□□□□□ -1.87
SCARNA16.3-201ENST00000516595 GPATCH8Q9UKJ3 1502 aaKnown RBP3.39□□□□□ -1.87
SCARNA16.3-201ENST00000516595 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.39□□□□□ -1.87
SCARNA16.3-201ENST00000516595 MYOM3Q5VTT5 1437 aa3.39□□□□□ -1.87
SCARNA16.3-201ENST00000516595 KIAA1107Q9UPP5 1409 aa3.39□□□□□ -1.87
SCARNA16.3-201ENST00000516595 HDGFP51858 240 aaKnown RBP3.39□□□□□ -1.87
SCARNA16.3-201ENST00000516595 PRSS12P56730 875 aa3.39□□□□□ -1.87
SCARNA16.3-201ENST00000516595 MDM2Q00987 491 aaPredicted RBP3.39□□□□□ -1.87
SCARNA16.3-201ENST00000516595 VARS2Q5ST30 1063 aaKnown RBP3.39□□□□□ -1.87
SCARNA16.3-201ENST00000516595 PADI6Q6TGC4 694 aa3.39□□□□□ -1.87
SCARNA16.3-201ENST00000516595 PACS2Q86VP3 889 aa3.39□□□□□ -1.87
SCARNA16.3-201ENST00000516595 RBM46Q8TBY0 533 aaKnown RBP3.39□□□□□ -1.87
SCARNA16.3-201ENST00000516595 MARVELD3Q96A59 401 aa3.39□□□□□ -1.87
SCARNA16.3-201ENST00000516595 FANCAO15360 1455 aa3.39□□□□□ -1.87
SCARNA16.3-201ENST00000516595 TCOF1Q13428 1488 aaKnown RBP3.39□□□□□ -1.87
SCARNA16.3-201ENST00000516595 PPRC1Q5VV67 1664 aaKnown RBP3.39□□□□□ -1.87
SCARNA16.3-201ENST00000516595 ABCC1P33527 1531 aa3.39□□□□□ -1.87
SCARNA16.3-201ENST00000516595 MYO5CQ9NQX4 1742 aa3.39□□□□□ -1.87
SCARNA16.3-201ENST00000516595 CCNB3Q8WWL7 1395 aa3.38□□□□□ -1.87
SCARNA16.3-201ENST00000516595 FGD6Q6ZV73 1430 aa3.38□□□□□ -1.87
SCARNA16.3-201ENST00000516595 RRBP1Q9P2E9 1410 aaKnown RBP3.38□□□□□ -1.87
SCARNA16.3-201ENST00000516595 FAM205CA6NFA0 338 aa3.38□□□□□ -1.87
SCARNA16.3-201ENST00000516595 ARID3CA6NKF2 412 aa3.38□□□□□ -1.87
SCARNA16.3-201ENST00000516595 ST18O60284 1047 aa3.38□□□□□ -1.87
SCARNA16.3-201ENST00000516595 COL9A1P20849 921 aa3.38□□□□□ -1.87
SCARNA16.3-201ENST00000516595 CLCN1P35523 988 aa3.38□□□□□ -1.87
SCARNA16.3-201ENST00000516595 EMP3P54852 163 aa3.38□□□□□ -1.87
SCARNA16.3-201ENST00000516595 FAM69CQ0P6D2 419 aa3.38□□□□□ -1.87
SCARNA16.3-201ENST00000516595 KANK4Q5T7N3 995 aaPredicted RBP3.38□□□□□ -1.87
SCARNA16.3-201ENST00000516595 NLRP7Q8WX94 980 aa3.38□□□□□ -1.87
SCARNA16.3-201ENST00000516595 STAC3Q96MF2 364 aa3.38□□□□□ -1.87
SCARNA16.3-201ENST00000516595 BCL2L12Q9HB09 334 aa3.38□□□□□ -1.87
SCARNA16.3-201ENST00000516595 CDC42BPAQ5VT25 1732 aa3.38□□□□□ -1.87
SCARNA16.3-201ENST00000516595 KDM5CP41229 1560 aa3.38□□□□□ -1.87
SCARNA16.3-201ENST00000516595 POGZQ7Z3K3 1410 aa3.37□□□□□ -1.87
SCARNA16.3-201ENST00000516595 AKNAQ7Z591 1439 aa3.37□□□□□ -1.87
SCARNA16.3-201ENST00000516595 ZNF518AQ6AHZ1 1483 aa3.37□□□□□ -1.87
SCARNA16.3-201ENST00000516595 MAGI2Q86UL8 1455 aa3.37□□□□□ -1.87
SCARNA16.3-201ENST00000516595 MBD5Q9P267 1494 aa3.37□□□□□ -1.87
SCARNA16.3-201ENST00000516595 SHANK2Q9UPX8 1470 aa3.37□□□□□ -1.87
SCARNA16.3-201ENST00000516595 PPP1R3GB7ZBB8 358 aa3.37□□□□□ -1.87
SCARNA16.3-201ENST00000516595 SSTR3P32745 418 aaPredicted RBP3.37□□□□□ -1.87
SCARNA16.3-201ENST00000516595 PSEN2P49810 448 aa3.37□□□□□ -1.87
SCARNA16.3-201ENST00000516595 EFCAB2Q5VUJ9 269 aa3.37□□□□□ -1.87
SCARNA16.3-201ENST00000516595 NUDT18Q6ZVK8 323 aa3.37□□□□□ -1.87
SCARNA16.3-201ENST00000516595 FAM117AQ9C073 453 aa3.37□□□□□ -1.87
SCARNA16.3-201ENST00000516595 GPCPD1Q9NPB8 672 aa3.37□□□□□ -1.87
SCARNA16.3-201ENST00000516595 PNMA3Q9UL41 463 aa3.37□□□□□ -1.87
SCARNA16.3-201ENST00000516595 AXIN2Q9Y2T1 843 aa3.37□□□□□ -1.87
SCARNA16.3-201ENST00000516595 ARHGAP5Q13017 1502 aa3.37□□□□□ -1.87
SCARNA16.3-201ENST00000516595 ZMYM4Q5VZL5 1548 aa3.37□□□□□ -1.87
SCARNA16.3-201ENST00000516595 ARHGEF5Q12774 1597 aa3.37□□□□□ -1.87
SCARNA16.3-201ENST00000516595 SAMD9LQ8IVG5 1584 aa3.37□□□□□ -1.87
SCARNA16.3-201ENST00000516595 CDC42BPBQ9Y5S2 1711 aa3.36□□□□□ -1.87
SCARNA16.3-201ENST00000516595 DENND4BO75064 1496 aaPredicted RBP3.36□□□□□ -1.87
SCARNA16.3-201ENST00000516595 ADGRL1O94910 1474 aa3.36□□□□□ -1.87
SCARNA16.3-201ENST00000516595 CAMSAP2Q08AD1 1489 aa3.36□□□□□ -1.87
SCARNA16.3-201ENST00000516595 CCDC141Q6ZP82 1450 aa3.36□□□□□ -1.87
SCARNA16.3-201ENST00000516595 SYCP2Q9BX26 1530 aa3.36□□□□□ -1.87
SCARNA16.3-201ENST00000516595 TRIM6-TRIM34B2RNG4 842 aa3.36□□□□□ -1.87
SCARNA16.3-201ENST00000516595 SMAPO00193 183 aa3.36□□□□□ -1.87
SCARNA16.3-201ENST00000516595 ARHGAP33O14559 1287 aa3.36□□□□□ -1.87
SCARNA16.3-201ENST00000516595 AMHR2Q16671 573 aa3.36□□□□□ -1.87
SCARNA16.3-201ENST00000516595 PROX2Q3B8N5 592 aa3.36□□□□□ -1.87
SCARNA16.3-201ENST00000516595 RSPH4AQ5TD94 716 aa3.36□□□□□ -1.87
SCARNA16.3-201ENST00000516595 GIGYF2Q6Y7W6 1299 aaKnown RBP3.36□□□□□ -1.87
SCARNA16.3-201ENST00000516595 METTL3Q86U44 580 aaKnown RBP3.36□□□□□ -1.87
SCARNA16.3-201ENST00000516595 PARP9Q8IXQ6 854 aa3.36□□□□□ -1.87
SCARNA16.3-201ENST00000516595 TATDN2Q93075 761 aa3.36□□□□□ -1.87
SCARNA16.3-201ENST00000516595 DDRGK1Q96HY6 314 aa3.36□□□□□ -1.87
SCARNA16.3-201ENST00000516595 KIAA1468Q9P260 1216 aa3.36□□□□□ -1.87
SCARNA16.3-201ENST00000516595 CFDP1Q9UEE9 299 aaPredicted RBP3.36□□□□□ -1.87
SCARNA16.3-201ENST00000516595 TSKSQ9UJT2 592 aa3.36□□□□□ -1.87
SCARNA16.3-201ENST00000516595 ADGRG1Q9Y653 693 aa3.36□□□□□ -1.87
SCARNA16.3-201ENST00000516595 FRMPD1Q5SYB0 1578 aa3.36□□□□□ -1.87
SCARNA16.3-201ENST00000516595 MAST1Q9Y2H9 1570 aa3.36□□□□□ -1.87
SCARNA16.3-201ENST00000516595 PTPN23Q9H3S7 1636 aa3.36□□□□□ -1.87
SCARNA16.3-201ENST00000516595 RTEL1-TNFRSF6BF6WH68 1400 aa3.36□□□□□ -1.87
SCARNA16.3-201ENST00000516595 ADGRL2O95490 1459 aa3.35□□□□□ -1.87
SCARNA16.3-201ENST00000516595 MLH3Q9UHC1 1453 aa3.35□□□□□ -1.87
SCARNA16.3-201ENST00000516595 ARHGEF12Q9NZN5 1544 aa3.35□□□□□ -1.87
SCARNA16.3-201ENST00000516595 REREQ9P2R6 1566 aa3.35□□□□□ -1.87
SCARNA16.3-201ENST00000516595 KDM6BO15054 1643 aa3.35□□□□□ -1.87
SCARNA16.3-201ENST00000516595 DNMT1P26358 1616 aaKnown RBP3.35□□□□□ -1.87
SCARNA16.3-201ENST00000516595 DDX11L8A8MPP1 907 aa3.35□□□□□ -1.87
SCARNA16.3-201ENST00000516595 NBPF26B4DH59 902 aa3.35□□□□□ -1.87
SCARNA16.3-201ENST00000516595 SLC4A3P48751 1232 aa3.35□□□□□ -1.87
SCARNA16.3-201ENST00000516595 PXYLP1Q8TE99 480 aa3.35□□□□□ -1.87
SCARNA16.3-201ENST00000516595 PHOX2BQ99453 314 aa3.35□□□□□ -1.87
SCARNA16.3-201ENST00000516595 REPIN1Q9BWE0 567 aaKnown RBP3.35□□□□□ -1.87
SCARNA16.3-201ENST00000516595 RBM27Q9P2N5 1060 aaKnown RBP3.35□□□□□ -1.87
SCARNA16.3-201ENST00000516595 RICTORQ6R327 1708 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms