RNA–Protein interactions for RNA: ENST00000515773.5

CUL9-218, Transcript of cullin 9, human

TSL 2

Gene CUL9, Length 8,150 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CUL9-218	ENST00000515773	FKBP5	Q13451	457 aa	Predicted RBP	13.7	□□□□□ -0.22
CUL9-218	ENST00000515773	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.7	□□□□□ -0.22
CUL9-218	ENST00000515773	EIF2S2	P20042	333 aa	Known RBP	13.7	□□□□□ -0.22
CUL9-218	ENST00000515773	NECTIN2	Q92692	538 aa		13.7	□□□□□ -0.22
CUL9-218	ENST00000515773	MCTP1	Q6DN14	999 aa		13.69	□□□□□ -0.22
CUL9-218	ENST00000515773	GGNBP2	Q9H3C7	697 aa		13.69	□□□□□ -0.22
CUL9-218	ENST00000515773	ARHGEF11	O15085	1522 aa		13.69	□□□□□ -0.22
CUL9-218	ENST00000515773	TSPYL4	Q9UJ04	414 aa		13.69	□□□□□ -0.22
CUL9-218	ENST00000515773	ANO2	Q9NQ90	1003 aa		13.69	□□□□□ -0.22
CUL9-218	ENST00000515773	IFIT2	P09913	472 aa	Known RBP	13.68	□□□□□ -0.22
CUL9-218	ENST00000515773	CFAP70	Q5T0N1	1121 aa		13.68	□□□□□ -0.22
CUL9-218	ENST00000515773	KIAA0586	Q9BVV6	1533 aa		13.68	□□□□□ -0.22
CUL9-218	ENST00000515773	CDC45	O75419	566 aa		13.68	□□□□□ -0.22
CUL9-218	ENST00000515773	BACH2	Q9BYV9	841 aa		13.68	□□□□□ -0.22
CUL9-218	ENST00000515773	AFAP1	Q8N556	730 aa		13.67	□□□□□ -0.22
CUL9-218	ENST00000515773	RNF20	Q5VTR2	975 aa		13.67	□□□□□ -0.22
CUL9-218	ENST00000515773	OSCAR	Q8IYS5	282 aa		13.67	□□□□□ -0.22
CUL9-218	ENST00000515773	MAGI1	Q96QZ7	1491 aa	Predicted RBP	13.67	□□□□□ -0.22
CUL9-218	ENST00000515773	CCDC184	Q52MB2	194 aa		13.67	□□□□□ -0.22
CUL9-218	ENST00000515773	CCDC9	Q9Y3X0	531 aa	Known RBP	13.67	□□□□□ -0.22
CUL9-218	ENST00000515773	RAPGEF6	Q8TEU7	1601 aa		13.67	□□□□□ -0.22
CUL9-218	ENST00000515773	BECN2	A8MW95	431 aa		13.66	□□□□□ -0.22
CUL9-218	ENST00000515773	RASSF8	Q8NHQ8	419 aa		13.66	□□□□□ -0.22
CUL9-218	ENST00000515773	DDX58	O95786	925 aa	Known RBP	13.66	□□□□□ -0.22
CUL9-218	ENST00000515773	CLSTN1	O94985	981 aa		13.66	□□□□□ -0.22
CUL9-218	ENST00000515773	TTC5	Q8N0Z6	440 aa		13.66	□□□□□ -0.22
CUL9-218	ENST00000515773	ANKRD30B	Q9BXX2	1392 aa		13.66	□□□□□ -0.22
CUL9-218	ENST00000515773	GOLGA6L1	Q8N7Z2	621 aa		13.65	□□□□□ -0.22
CUL9-218	ENST00000515773	ERC2	O15083	957 aa		13.65	□□□□□ -0.23
CUL9-218	ENST00000515773	NOC3L	Q8WTT2	800 aa	Known RBP	13.65	□□□□□ -0.23
CUL9-218	ENST00000515773	BCAR3	O75815	825 aa		13.64	□□□□□ -0.23
CUL9-218	ENST00000515773	TOMM22	Q9NS69	142 aa		13.64	□□□□□ -0.23
CUL9-218	ENST00000515773	NCOA1	Q15788	1441 aa		13.64	□□□□□ -0.23
CUL9-218	ENST00000515773	CT47B1	P0C2W7	299 aa	Predicted RBP	13.64	□□□□□ -0.23
CUL9-218	ENST00000515773	RPRD2	Q5VT52	1461 aa	Known RBP	13.64	□□□□□ -0.23
CUL9-218	ENST00000515773	PSME1	Q06323	249 aa		13.64	□□□□□ -0.23
CUL9-218	ENST00000515773	CREBRF	Q8IUR6	639 aa		13.64	□□□□□ -0.23
CUL9-218	ENST00000515773	HSP90AB4P	Q58FF6	505 aa		13.64	□□□□□ -0.23
CUL9-218	ENST00000515773	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.64	□□□□□ -0.23
CUL9-218	ENST00000515773	MAPKBP1	O60336	1514 aa		13.64	□□□□□ -0.23
CUL9-218	ENST00000515773	WDR63	Q8IWG1	891 aa		13.64	□□□□□ -0.23
CUL9-218	ENST00000515773	NOB1	Q9ULX3	412 aa	Known RBP	13.63	□□□□□ -0.23
CUL9-218	ENST00000515773	SMC3	Q9UQE7	1217 aa		13.63	□□□□□ -0.23
CUL9-218	ENST00000515773	NASP	P49321	788 aa	Predicted RBP	13.63	□□□□□ -0.23
CUL9-218	ENST00000515773	MRE11	P49959	708 aa		13.63	□□□□□ -0.23
CUL9-218	ENST00000515773	PDZRN3	Q9UPQ7	1066 aa		13.63	□□□□□ -0.23
CUL9-218	ENST00000515773	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
CUL9-218	ENST00000515773	ABCC5	O15440	1437 aa		13.63	□□□□□ -0.23
CUL9-218	ENST00000515773	TRAK2	O60296	914 aa		13.62	□□□□□ -0.23
CUL9-218	ENST00000515773	FAM43A	Q8N2R8	423 aa		13.62	□□□□□ -0.23
CUL9-218	ENST00000515773	GCC1	Q96CN9	775 aa		13.62	□□□□□ -0.23
CUL9-218	ENST00000515773	CYB5RL	Q6IPT4	315 aa		13.61	□□□□□ -0.23
CUL9-218	ENST00000515773	TMX4	Q9H1E5	349 aa	Predicted RBP	13.61	□□□□□ -0.23
CUL9-218	ENST00000515773	NKTR	P30414	1462 aa	Known RBP	13.61	□□□□□ -0.23
CUL9-218	ENST00000515773	FRAT2	O75474	233 aa	Predicted RBP	13.61	□□□□□ -0.23
CUL9-218	ENST00000515773	TPD52L1	Q16890	204 aa	Predicted RBP	13.61	□□□□□ -0.23
CUL9-218	ENST00000515773	UBTFL1	P0CB47	393 aa	Predicted RBP	13.61	□□□□□ -0.23
CUL9-218	ENST00000515773	TPM3	P06753	285 aa		13.61	□□□□□ -0.23
CUL9-218	ENST00000515773	EXOSC9	Q06265	439 aa	Known RBP	13.61	□□□□□ -0.23
CUL9-218	ENST00000515773	PRKAR2B	P31323	418 aa		13.6	□□□□□ -0.23
CUL9-218	ENST00000515773	AKAP17A	Q02040	695 aa	Known RBP	13.6	□□□□□ -0.23
CUL9-218	ENST00000515773	PBRM1	Q86U86	1689 aa		13.6	□□□□□ -0.23
CUL9-218	ENST00000515773	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.6	□□□□□ -0.23
CUL9-218	ENST00000515773	SLC12A5	Q9H2X9	1139 aa		13.6	□□□□□ -0.23
CUL9-218	ENST00000515773	UGGT2	Q9NYU1	1516 aa		13.6	□□□□□ -0.23
CUL9-218	ENST00000515773	CNTROB	Q8N137	903 aa		13.6	□□□□□ -0.23
CUL9-218	ENST00000515773	BICD2	Q8TD16	824 aa		13.6	□□□□□ -0.23
CUL9-218	ENST00000515773	PRAM1	Q96QH2	718 aa		13.6	□□□□□ -0.23
CUL9-218	ENST00000515773	VPS37C	A5D8V6	355 aa	Predicted RBP	13.59	□□□□□ -0.23
CUL9-218	ENST00000515773	CPLX2	Q6PUV4	134 aa	Known RBP	13.59	□□□□□ -0.23
CUL9-218	ENST00000515773	SYNE3	Q6ZMZ3	975 aa		13.59	□□□□□ -0.23
CUL9-218	ENST00000515773	MVP	Q14764	893 aa	Known RBP	13.59	□□□□□ -0.23
CUL9-218	ENST00000515773	TSR2	Q969E8	191 aa	Known RBP	13.59	□□□□□ -0.23
CUL9-218	ENST00000515773	TRIM29	Q14134	588 aa		13.59	□□□□□ -0.23
CUL9-218	ENST00000515773	CCDC30	Q5VVM6	783 aa		13.59	□□□□□ -0.23
CUL9-218	ENST00000515773	NSD3	Q9BZ95	1437 aa		13.59	□□□□□ -0.23
CUL9-218	ENST00000515773	TSR1	Q2NL82	804 aa	Known RBP	13.58	□□□□□ -0.23
CUL9-218	ENST00000515773	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.58	□□□□□ -0.23
CUL9-218	ENST00000515773	RABEP1	Q15276	862 aa		13.58	□□□□□ -0.24
CUL9-218	ENST00000515773	TWISTNB	Q3B726	338 aa	Predicted RBP	13.58	□□□□□ -0.24
CUL9-218	ENST00000515773	EIF2AK4	Q9P2K8	1649 aa	Known RBP	13.58	□□□□□ -0.24
CUL9-218	ENST00000515773	MCM2	P49736	904 aa		13.58	□□□□□ -0.24
CUL9-218	ENST00000515773	SASS6	Q6UVJ0	657 aa		13.58	□□□□□ -0.24
CUL9-218	ENST00000515773	ADGB	Q8N7X0	1667 aa		13.58	□□□□□ -0.24
CUL9-218	ENST00000515773	TPM1	P09493	284 aa		13.58	□□□□□ -0.24
CUL9-218	ENST00000515773	EVA1C	P58658	441 aa		13.58	□□□□□ -0.24
CUL9-218	ENST00000515773	FAM69C	Q0P6D2	419 aa		13.58	□□□□□ -0.24
CUL9-218	ENST00000515773	C1orf115	Q9H7X2	142 aa		13.58	□□□□□ -0.24
CUL9-218	ENST00000515773	HOOK1	Q9UJC3	728 aa	Known RBP	13.58	□□□□□ -0.24
CUL9-218	ENST00000515773	GRIN2A	Q12879	1464 aa		13.57	□□□□□ -0.24
CUL9-218	ENST00000515773	ATF7IP	Q6VMQ6	1270 aa		13.57	□□□□□ -0.24
CUL9-218	ENST00000515773	PLB1	Q6P1J6	1458 aa		13.57	□□□□□ -0.24
CUL9-218	ENST00000515773	PES1	O00541	588 aa	Known RBP	13.57	□□□□□ -0.24
CUL9-218	ENST00000515773	CPLX1	O14810	134 aa		13.57	□□□□□ -0.24
CUL9-218	ENST00000515773	GTF2E1	P29083	439 aa	Predicted RBP	13.57	□□□□□ -0.24
CUL9-218	ENST00000515773	ZNF592	Q92610	1267 aa		13.57	□□□□□ -0.24
CUL9-218	ENST00000515773	GNAI3	P08754	354 aa		13.56	□□□□□ -0.24
CUL9-218	ENST00000515773	GAS2L2	Q8NHY3	880 aa		13.56	□□□□□ -0.24
CUL9-218	ENST00000515773	TRDN	Q13061	729 aa		13.56	□□□□□ -0.24
CUL9-218	ENST00000515773	C11orf95	C9JLR9	678 aa	Predicted RBP	13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms