RNA–Protein interactions for RNA: ENST00000515731.1

SDHC-209, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 3

Gene SDHC, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-209ENST00000515731 CCDC144AA2RUR9 1427 aa24.07■■□□□ 1.44
SDHC-209ENST00000515731 ANKRD30BQ9BXX2 1392 aa24.06■■□□□ 1.44
SDHC-209ENST00000515731 ADGRF5Q8IZF2 1346 aa24.06■■□□□ 1.44
SDHC-209ENST00000515731 MARF1Q9Y4F3 1742 aaKnown RBP24.04■■□□□ 1.44
SDHC-209ENST00000515731 FOXD1Q16676 465 aa24.04■■□□□ 1.44
SDHC-209ENST00000515731 RGS12O14924 1447 aa24.03■■□□□ 1.44
SDHC-209ENST00000515731 MPHOSPH9Q99550 1183 aa24.03■■□□□ 1.44
SDHC-209ENST00000515731 NGLY1Q96IV0 654 aa24.02■■□□□ 1.44
SDHC-209ENST00000515731 ACIN1Q9UKV3 1341 aaKnown RBP24.02■■□□□ 1.44
SDHC-209ENST00000515731 LRPPRCP42704 1394 aaKnown RBP24.02■■□□□ 1.44
SDHC-209ENST00000515731 ABCC11Q96J66 1382 aa24.02■■□□□ 1.44
SDHC-209ENST00000515731 PXDNQ92626 1479 aa24.01■■□□□ 1.43
SDHC-209ENST00000515731 FNBP4Q8N3X1 1017 aaPredicted RBP24.01■■□□□ 1.43
SDHC-209ENST00000515731 NPHP3Q7Z494 1330 aa24.01■■□□□ 1.43
SDHC-209ENST00000515731 PIK3C2GO75747 1445 aa24■■□□□ 1.43
SDHC-209ENST00000515731 MYOM2P54296 1465 aa24■■□□□ 1.43
SDHC-209ENST00000515731 ADAMTS2O95450 1211 aa23.99■■□□□ 1.43
SDHC-209ENST00000515731 FMN2Q9NZ56 1722 aa23.98■■□□□ 1.43
SDHC-209ENST00000515731 RGL3Q3MIN7 710 aa23.97■■□□□ 1.43
SDHC-209ENST00000515731 ESCO1Q5FWF5 840 aa23.97■■□□□ 1.43
SDHC-209ENST00000515731 SIRT1Q96EB6 747 aa23.97■■□□□ 1.43
SDHC-209ENST00000515731 WAPLQ7Z5K2 1190 aa23.95■■□□□ 1.42
SDHC-209ENST00000515731 USP21Q9UK80 565 aa23.95■■□□□ 1.42
SDHC-209ENST00000515731 TRPC5Q9UL62 973 aaPredicted RBP23.95■■□□□ 1.42
SDHC-209ENST00000515731 KIF1AQ12756 1690 aa23.95■■□□□ 1.42
SDHC-209ENST00000515731 ATRNO75882 1429 aa23.94■■□□□ 1.42
SDHC-209ENST00000515731 NRXN1Q9ULB1 1477 aa23.94■■□□□ 1.42
SDHC-209ENST00000515731 YTHDC2Q9H6S0 1430 aaKnown RBP23.93■■□□□ 1.42
SDHC-209ENST00000515731 FOXO3O43524 673 aa23.92■■□□□ 1.42
SDHC-209ENST00000515731 STK26Q9P289 416 aa23.92■■□□□ 1.42
SDHC-209ENST00000515731 RGPD8O14715 1765 aaPredicted RBP23.91■■□□□ 1.42
SDHC-209ENST00000515731 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.91■■□□□ 1.42
SDHC-209ENST00000515731 TMEM132EQ6IEE7 984 aa23.91■■□□□ 1.42
SDHC-209ENST00000515731 PLEKHH1Q9ULM0 1364 aa23.91■■□□□ 1.42
SDHC-209ENST00000515731 EP400Q96L91 3159 aa23.9■■□□□ 1.42
SDHC-209ENST00000515731 BCL9LQ86UU0 1499 aa23.9■■□□□ 1.42
SDHC-209ENST00000515731 C14orf93Q9H972 538 aaKnown RBP23.9■■□□□ 1.42
SDHC-209ENST00000515731 ATAD2Q6PL18 1390 aa23.88■■□□□ 1.41
SDHC-209ENST00000515731 SPATA31A3Q5VYP0 1347 aa23.84■■□□□ 1.41
SDHC-209ENST00000515731 DHX57Q6P158 1386 aaKnown RBP23.83■■□□□ 1.41
SDHC-209ENST00000515731 XPCQ01831 940 aaPredicted RBP23.83■■□□□ 1.41
SDHC-209ENST00000515731 NUTM2FA1L443 756 aa23.82■■□□□ 1.4
SDHC-209ENST00000515731 SLIT2O94813 1529 aa23.81■■□□□ 1.4
SDHC-209ENST00000515731 DLC1Q96QB1 1528 aa23.81■■□□□ 1.4
SDHC-209ENST00000515731 USP32Q8NFA0 1604 aa23.81■■□□□ 1.4
SDHC-209ENST00000515731 CFAP70Q5T0N1 1121 aa23.8■■□□□ 1.4
SDHC-209ENST00000515731 KRT28Q7Z3Y7 464 aa23.79■■□□□ 1.4
SDHC-209ENST00000515731 GJD4Q96KN9 370 aaPredicted RBP23.79■■□□□ 1.4
SDHC-209ENST00000515731 ADGRB2O60241 1585 aa23.78■■□□□ 1.4
SDHC-209ENST00000515731 NWD2Q9ULI1 1742 aa23.77■■□□□ 1.4
SDHC-209ENST00000515731 PHF8Q9UPP1 1060 aa23.77■■□□□ 1.4
SDHC-209ENST00000515731 GLI3P10071 1580 aa23.77■■□□□ 1.4
SDHC-209ENST00000515731 SRCAPQ6ZRS2 3230 aa23.76■■□□□ 1.39
SDHC-209ENST00000515731 ABCA3Q99758 1704 aa23.76■■□□□ 1.39
SDHC-209ENST00000515731 CCDC125Q86Z20 511 aa23.76■■□□□ 1.39
SDHC-209ENST00000515731 UNC5CLQ8IV45 518 aa23.76■■□□□ 1.39
SDHC-209ENST00000515731 SBNO1A3KN83 1393 aa23.76■■□□□ 1.39
SDHC-209ENST00000515731 TNS3Q68CZ2 1445 aa23.76■■□□□ 1.39
SDHC-209ENST00000515731 ADGRB1O14514 1584 aa23.75■■□□□ 1.39
SDHC-209ENST00000515731 PSME1Q06323 249 aa23.75■■□□□ 1.39
SDHC-209ENST00000515731 RAB3GAP2Q9H2M9 1393 aa23.74■■□□□ 1.39
SDHC-209ENST00000515731 ANKARQ7Z5J8 1434 aa23.74■■□□□ 1.39
SDHC-209ENST00000515731 BRWD3Q6RI45 1802 aa23.73■■□□□ 1.39
SDHC-209ENST00000515731 PRAM1Q96QH2 718 aa23.73■■□□□ 1.39
SDHC-209ENST00000515731 RALGAPBQ86X10 1494 aa23.72■■□□□ 1.39
SDHC-209ENST00000515731 PLCH1Q4KWH8 1693 aa23.72■■□□□ 1.39
SDHC-209ENST00000515731 TRPM3Q9HCF6 1732 aaPredicted RBP23.7■■□□□ 1.39
SDHC-209ENST00000515731 ARHGEF10O15013 1369 aa23.69■■□□□ 1.38
SDHC-209ENST00000515731 STAC3Q96MF2 364 aa23.69■■□□□ 1.38
SDHC-209ENST00000515731 ALS2Q96Q42 1657 aa23.67■■□□□ 1.38
SDHC-209ENST00000515731 ONECUT3O60422 494 aaPredicted RBP23.66■■□□□ 1.38
SDHC-209ENST00000515731 POGKQ9P215 609 aa23.66■■□□□ 1.38
SDHC-209ENST00000515731 HRCP23327 699 aa23.65■■□□□ 1.38
SDHC-209ENST00000515731 VPS72Q15906 364 aa23.65■■□□□ 1.38
SDHC-209ENST00000515731 SAFB2Q14151 953 aaKnown RBP eCLIP23.64■■□□□ 1.37
SDHC-209ENST00000515731 EIF3AQ14152 1382 aaKnown RBP23.64■■□□□ 1.37
SDHC-209ENST00000515731 NRAPQ86VF7 1730 aa23.63■■□□□ 1.37
SDHC-209ENST00000515731 CABLES1Q8TDN4 633 aa23.63■■□□□ 1.37
SDHC-209ENST00000515731 TULP4Q9NRJ4 1543 aa23.63■■□□□ 1.37
SDHC-209ENST00000515731 CRYBG1Q9Y4K1 1723 aa23.62■■□□□ 1.37
SDHC-209ENST00000515731 BLMP54132 1417 aaPredicted RBP23.61■■□□□ 1.37
SDHC-209ENST00000515731 PMFBP1Q8TBY8 1022 aa23.61■■□□□ 1.37
SDHC-209ENST00000515731 ZRANB1Q9UGI0 708 aa23.61■■□□□ 1.37
SDHC-209ENST00000515731 ARHGEF28Q8N1W1 1705 aaKnown RBP23.6■■□□□ 1.37
SDHC-209ENST00000515731 HAP1P54257 671 aaPredicted RBP23.6■■□□□ 1.37
SDHC-209ENST00000515731 TRAK1Q9UPV9 953 aa23.6■■□□□ 1.37
SDHC-209ENST00000515731 COL14A1Q05707 1796 aaKnown RBP23.59■■□□□ 1.37
SDHC-209ENST00000515731 ITSN1Q15811 1721 aa23.59■■□□□ 1.37
SDHC-209ENST00000515731 FAM83GA6ND36 823 aa23.58■■□□□ 1.37
SDHC-209ENST00000515731 WASLO00401 505 aaPredicted RBP23.58■■□□□ 1.37
SDHC-209ENST00000515731 SEPT12Q8IYM1 358 aa23.58■■□□□ 1.37
SDHC-209ENST00000515731 DCAF11Q8TEB1 546 aa23.58■■□□□ 1.37
SDHC-209ENST00000515731 PRR36Q9H6K5 1346 aa23.58■■□□□ 1.36
SDHC-209ENST00000515731 GPRASP1Q5JY77 1395 aa23.56■■□□□ 1.36
SDHC-209ENST00000515731 LMOD2Q6P5Q4 547 aa23.56■■□□□ 1.36
SDHC-209ENST00000515731 HIRIP3Q9BW71 556 aaPredicted RBP23.55■■□□□ 1.36
SDHC-209ENST00000515731 KDM2AQ9Y2K7 1162 aa23.55■■□□□ 1.36
SDHC-209ENST00000515731 MINK1Q8N4C8 1332 aaPredicted RBP23.55■■□□□ 1.36
SDHC-209ENST00000515731 KIAA1210Q9ULL0 1709 aa23.54■■□□□ 1.36
SDHC-209ENST00000515731 KRT27Q7Z3Y8 459 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms