RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 PLEKHG1Q9ULL1 1385 aa13.94□□□□□ -0.18
SNF8-214ENST00000515174 CENPJQ9HC77 1338 aaPredicted RBP13.93□□□□□ -0.18
SNF8-214ENST00000515174 ADAMTS13Q76LX8 1427 aa13.93□□□□□ -0.18
SNF8-214ENST00000515174 CHD2O14647 1828 aaKnown RBP13.92□□□□□ -0.18
SNF8-214ENST00000515174 PANK3Q9H999 370 aa13.92□□□□□ -0.18
SNF8-214ENST00000515174 RGS17Q9UGC6 210 aaPredicted RBP13.92□□□□□ -0.18
SNF8-214ENST00000515174 TXNDC2Q86VQ3 553 aa13.91□□□□□ -0.18
SNF8-214ENST00000515174 BRD4O60885 1362 aaPredicted RBP13.91□□□□□ -0.18
SNF8-214ENST00000515174 PARD3Q8TEW0 1356 aa13.91□□□□□ -0.18
SNF8-214ENST00000515174 LTKP29376 864 aa13.9□□□□□ -0.18
SNF8-214ENST00000515174 MRS2Q9HD23 443 aa13.9□□□□□ -0.18
SNF8-214ENST00000515174 EID1Q9Y6B2 187 aa13.9□□□□□ -0.18
SNF8-214ENST00000515174 MYOM1P52179 1685 aa13.9□□□□□ -0.18
SNF8-214ENST00000515174 MYBBP1AQ9BQG0 1328 aaKnown RBP13.9□□□□□ -0.19
SNF8-214ENST00000515174 STRCP1A6NGW2 1772 aa13.89□□□□□ -0.19
SNF8-214ENST00000515174 NWD1Q149M9 1564 aa13.89□□□□□ -0.19
SNF8-214ENST00000515174 DLC1Q96QB1 1528 aa13.89□□□□□ -0.19
SNF8-214ENST00000515174 CCDC184Q52MB2 194 aa13.88□□□□□ -0.19
SNF8-214ENST00000515174 YTHDC2Q9H6S0 1430 aaKnown RBP13.88□□□□□ -0.19
SNF8-214ENST00000515174 TMEM132EQ6IEE7 984 aa13.87□□□□□ -0.19
SNF8-214ENST00000515174 POTEAQ6S8J7 498 aa13.87□□□□□ -0.19
SNF8-214ENST00000515174 SIRT1Q96EB6 747 aa13.87□□□□□ -0.19
SNF8-214ENST00000515174 TRAK1Q9UPV9 953 aa13.87□□□□□ -0.19
SNF8-214ENST00000515174 NALCNQ8IZF0 1738 aa13.87□□□□□ -0.19
SNF8-214ENST00000515174 INSRP06213 1382 aa13.86□□□□□ -0.19
SNF8-214ENST00000515174 NLRP13Q86W25 1043 aa13.86□□□□□ -0.19
SNF8-214ENST00000515174 METP08581 1390 aa13.85□□□□□ -0.19
SNF8-214ENST00000515174 AMER1Q5JTC6 1135 aaPredicted RBP13.85□□□□□ -0.19
SNF8-214ENST00000515174 PNISRQ8TF01 805 aaKnown RBP13.85□□□□□ -0.19
SNF8-214ENST00000515174 KNSTRNQ9Y448 316 aa13.85□□□□□ -0.19
SNF8-214ENST00000515174 TULP4Q9NRJ4 1543 aa13.85□□□□□ -0.19
SNF8-214ENST00000515174 ABCC11Q96J66 1382 aa13.84□□□□□ -0.19
SNF8-214ENST00000515174 PTPRUQ92729 1446 aa13.84□□□□□ -0.19
SNF8-214ENST00000515174 EVC2Q86UK5 1308 aa13.84□□□□□ -0.19
SNF8-214ENST00000515174 LRPPRCP42704 1394 aaKnown RBP13.83□□□□□ -0.19
SNF8-214ENST00000515174 TECPR2O15040 1411 aa13.83□□□□□ -0.2
SNF8-214ENST00000515174 FAM135BQ49AJ0 1406 aa13.83□□□□□ -0.2
SNF8-214ENST00000515174 PROSER2Q86WR7 435 aaPredicted RBP13.83□□□□□ -0.2
SNF8-214ENST00000515174 TMC1Q8TDI8 760 aa13.83□□□□□ -0.2
SNF8-214ENST00000515174 GTF3C3Q9Y5Q9 886 aa13.83□□□□□ -0.2
SNF8-214ENST00000515174 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.83□□□□□ -0.2
SNF8-214ENST00000515174 ADGRB2O60241 1585 aa13.83□□□□□ -0.2
SNF8-214ENST00000515174 NINLQ9Y2I6 1382 aa13.83□□□□□ -0.2
SNF8-214ENST00000515174 BCANQ96GW7 911 aa13.82□□□□□ -0.2
SNF8-214ENST00000515174 TMEM94Q12767 1356 aa13.82□□□□□ -0.2
SNF8-214ENST00000515174 XIRP1Q702N8 1843 aaKnown RBP13.81□□□□□ -0.2
SNF8-214ENST00000515174 RBM33Q96EV2 1170 aaKnown RBP13.81□□□□□ -0.2
SNF8-214ENST00000515174 PTCH1Q13635 1447 aa13.81□□□□□ -0.2
SNF8-214ENST00000515174 ZBED9Q6R2W3 1325 aa13.8□□□□□ -0.2
SNF8-214ENST00000515174 TOPAZ1Q8N9V7 1692 aa13.79□□□□□ -0.2
SNF8-214ENST00000515174 KCNA6P17658 529 aa13.79□□□□□ -0.2
SNF8-214ENST00000515174 HNRNPUQ00839 825 aaKnown RBP eCLIP13.79□□□□□ -0.2
SNF8-214ENST00000515174 SLC26A8Q96RN1 970 aa13.79□□□□□ -0.2
SNF8-214ENST00000515174 FAM9BQ8IZU0 186 aa13.78□□□□□ -0.2
SNF8-214ENST00000515174 STK26Q9P289 416 aa13.78□□□□□ -0.2
SNF8-214ENST00000515174 PLEKHH1Q9ULM0 1364 aa13.78□□□□□ -0.2
SNF8-214ENST00000515174 FMN2Q9NZ56 1722 aa13.78□□□□□ -0.2
SNF8-214ENST00000515174 RGPD8O14715 1765 aaPredicted RBP13.77□□□□□ -0.21
SNF8-214ENST00000515174 ITSN1Q15811 1721 aa13.77□□□□□ -0.21
SNF8-214ENST00000515174 ATAD2Q6PL18 1390 aa13.77□□□□□ -0.21
SNF8-214ENST00000515174 CARD14Q9BXL6 1004 aa13.77□□□□□ -0.21
SNF8-214ENST00000515174 ROBO2Q9HCK4 1378 aa13.76□□□□□ -0.21
SNF8-214ENST00000515174 MEX3CQ5U5Q3 659 aaKnown RBP13.76□□□□□ -0.21
SNF8-214ENST00000515174 ROBO1Q9Y6N7 1651 aa13.75□□□□□ -0.21
SNF8-214ENST00000515174 USP32Q8NFA0 1604 aa13.75□□□□□ -0.21
SNF8-214ENST00000515174 NKTRP30414 1462 aaKnown RBP13.75□□□□□ -0.21
SNF8-214ENST00000515174 MSH6P52701 1360 aa13.75□□□□□ -0.21
SNF8-214ENST00000515174 PIK3R4Q99570 1358 aa13.75□□□□□ -0.21
SNF8-214ENST00000515174 CC2D1BQ5T0F9 858 aaKnown RBP13.75□□□□□ -0.21
SNF8-214ENST00000515174 PRAM1Q96QH2 718 aa13.75□□□□□ -0.21
SNF8-214ENST00000515174 POGKQ9P215 609 aa13.75□□□□□ -0.21
SNF8-214ENST00000515174 ANKRD36BQ8N2N9 1353 aa13.74□□□□□ -0.21
SNF8-214ENST00000515174 PPP2R1AP30153 589 aa13.74□□□□□ -0.21
SNF8-214ENST00000515174 SLC12A5Q9H2X9 1139 aa13.74□□□□□ -0.21
SNF8-214ENST00000515174 SLAIN2Q9P270 581 aa13.74□□□□□ -0.21
SNF8-214ENST00000515174 TBX22Q9Y458 520 aa13.74□□□□□ -0.21
SNF8-214ENST00000515174 CDC42BPGQ6DT37 1551 aa13.74□□□□□ -0.21
SNF8-214ENST00000515174 NSD2O96028 1365 aa13.73□□□□□ -0.21
SNF8-214ENST00000515174 JCADQ9P266 1359 aa13.73□□□□□ -0.21
SNF8-214ENST00000515174 AKAP12Q02952 1782 aa13.73□□□□□ -0.21
SNF8-214ENST00000515174 SAFB2Q14151 953 aaKnown RBP eCLIP13.72□□□□□ -0.21
SNF8-214ENST00000515174 C14orf37Q86TY3 774 aa13.72□□□□□ -0.21
SNF8-214ENST00000515174 MON2Q7Z3U7 1717 aa13.7□□□□□ -0.22
SNF8-214ENST00000515174 CGNL1Q0VF96 1302 aa13.7□□□□□ -0.22
SNF8-214ENST00000515174 CDK19Q9BWU1 502 aa13.7□□□□□ -0.22
SNF8-214ENST00000515174 PHLPP1O60346 1717 aa13.7□□□□□ -0.22
SNF8-214ENST00000515174 KIF20BQ96Q89 1820 aa13.69□□□□□ -0.22
SNF8-214ENST00000515174 MINK1Q8N4C8 1332 aaPredicted RBP13.69□□□□□ -0.22
SNF8-214ENST00000515174 ZNF772Q68DY9 489 aaPredicted RBP13.69□□□□□ -0.22
SNF8-214ENST00000515174 CABP2Q9NPB3 220 aa13.69□□□□□ -0.22
SNF8-214ENST00000515174 TERF2IPQ9NYB0 399 aa13.69□□□□□ -0.22
SNF8-214ENST00000515174 ATP7BP35670 1465 aa13.68□□□□□ -0.22
SNF8-214ENST00000515174 NSD3Q9BZ95 1437 aa13.68□□□□□ -0.22
SNF8-214ENST00000515174 SRPK2P78362 688 aaKnown RBP13.68□□□□□ -0.22
SNF8-214ENST00000515174 WAPLQ7Z5K2 1190 aa13.68□□□□□ -0.22
SNF8-214ENST00000515174 UPF1Q92900 1129 aaKnown RBP eCLIP13.68□□□□□ -0.22
SNF8-214ENST00000515174 AMOTL2Q9Y2J4 779 aa13.68□□□□□ -0.22
SNF8-214ENST00000515174 NRKQ7Z2Y5 1582 aa13.67□□□□□ -0.22
SNF8-214ENST00000515174 ADGRL3Q9HAR2 1447 aa13.67□□□□□ -0.22
SNF8-214ENST00000515174 WASLO00401 505 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms