RNA–Protein interactions for RNA: ENST00000514777.1

SMAD5-209, Transcript of SMAD family member 5, humanhuman

TSL 3

Gene SMAD5, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-209ENST00000514777 VGFO15240 615 aaPredicted RBP19.98■□□□□ 0.79
SMAD5-209ENST00000514777 PPARGC1BQ86YN6 1023 aaKnown RBP19.98■□□□□ 0.79
SMAD5-209ENST00000514777 ZRANB1Q9UGI0 708 aa19.97■□□□□ 0.79
SMAD5-209ENST00000514777 PXDNQ92626 1479 aa19.96■□□□□ 0.79
SMAD5-209ENST00000514777 PPLO60437 1756 aa19.95■□□□□ 0.78
SMAD5-209ENST00000514777 HFM1A2PYH4 1435 aa19.95■□□□□ 0.78
SMAD5-209ENST00000514777 ESCO1Q5FWF5 840 aa19.94■□□□□ 0.78
SMAD5-209ENST00000514777 CCDC125Q86Z20 511 aa19.93■□□□□ 0.78
SMAD5-209ENST00000514777 GJD4Q96KN9 370 aaPredicted RBP19.93■□□□□ 0.78
SMAD5-209ENST00000514777 RPGRIP1LQ68CZ1 1315 aa19.93■□□□□ 0.78
SMAD5-209ENST00000514777 FOXO3O43524 673 aa19.92■□□□□ 0.78
SMAD5-209ENST00000514777 XPCQ01831 940 aaPredicted RBP19.92■□□□□ 0.78
SMAD5-209ENST00000514777 NPHP3Q7Z494 1330 aa19.92■□□□□ 0.78
SMAD5-209ENST00000514777 NAIPQ13075 1403 aa19.92■□□□□ 0.78
SMAD5-209ENST00000514777 CDC42BPGQ6DT37 1551 aa19.91■□□□□ 0.78
SMAD5-209ENST00000514777 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.9■□□□□ 0.78
SMAD5-209ENST00000514777 BRWD3Q6RI45 1802 aa19.9■□□□□ 0.78
SMAD5-209ENST00000514777 GLI3P10071 1580 aa19.88■□□□□ 0.77
SMAD5-209ENST00000514777 FOXD1Q16676 465 aa19.88■□□□□ 0.77
SMAD5-209ENST00000514777 WAPLQ7Z5K2 1190 aa19.87■□□□□ 0.77
SMAD5-209ENST00000514777 NUTM2FA1L443 756 aa19.86■□□□□ 0.77
SMAD5-209ENST00000514777 SLIT2O94813 1529 aa19.86■□□□□ 0.77
SMAD5-209ENST00000514777 UNC5CLQ8IV45 518 aa19.85■□□□□ 0.77
SMAD5-209ENST00000514777 RALGAPBQ86X10 1494 aa19.85■□□□□ 0.77
SMAD5-209ENST00000514777 ADGRF5Q8IZF2 1346 aa19.84■□□□□ 0.77
SMAD5-209ENST00000514777 SPATA31A3Q5VYP0 1347 aa19.82■□□□□ 0.76
SMAD5-209ENST00000514777 DEFB132Q7Z7B7 95 aa19.82■□□□□ 0.76
SMAD5-209ENST00000514777 STK26Q9P289 416 aa19.82■□□□□ 0.76
SMAD5-209ENST00000514777 TECPR2O15040 1411 aa19.82■□□□□ 0.76
SMAD5-209ENST00000514777 BLMP54132 1417 aaPredicted RBP19.82■□□□□ 0.76
SMAD5-209ENST00000514777 RRBP1Q9P2E9 1410 aaKnown RBP19.82■□□□□ 0.76
SMAD5-209ENST00000514777 RGPD8O14715 1765 aaPredicted RBP19.82■□□□□ 0.76
SMAD5-209ENST00000514777 LRPPRCP42704 1394 aaKnown RBP19.82■□□□□ 0.76
SMAD5-209ENST00000514777 PLEKHH1Q9ULM0 1364 aa19.82■□□□□ 0.76
SMAD5-209ENST00000514777 SLC4A1APQ9BWU0 796 aaKnown RBP19.81■□□□□ 0.76
SMAD5-209ENST00000514777 FMN2Q9NZ56 1722 aa19.81■□□□□ 0.76
SMAD5-209ENST00000514777 TMEM132EQ6IEE7 984 aa19.79■□□□□ 0.76
SMAD5-209ENST00000514777 ABCC11Q96J66 1382 aa19.79■□□□□ 0.76
SMAD5-209ENST00000514777 KNDC1Q76NI1 1749 aa19.79■□□□□ 0.76
SMAD5-209ENST00000514777 IFT172Q9UG01 1749 aa19.79■□□□□ 0.76
SMAD5-209ENST00000514777 USP32Q8NFA0 1604 aa19.78■□□□□ 0.76
SMAD5-209ENST00000514777 KRT28Q7Z3Y7 464 aa19.78■□□□□ 0.76
SMAD5-209ENST00000514777 SEPT12Q8IYM1 358 aa19.77■□□□□ 0.76
SMAD5-209ENST00000514777 KIF1AQ12756 1690 aa19.76■□□□□ 0.75
SMAD5-209ENST00000514777 ONECUT3O60422 494 aaPredicted RBP19.76■□□□□ 0.75
SMAD5-209ENST00000514777 RGL3Q3MIN7 710 aa19.76■□□□□ 0.75
SMAD5-209ENST00000514777 CABLES1Q8TDN4 633 aa19.75■□□□□ 0.75
SMAD5-209ENST00000514777 SPATA31E1Q6ZUB1 1445 aa19.75■□□□□ 0.75
SMAD5-209ENST00000514777 VPS72Q15906 364 aa19.74■□□□□ 0.75
SMAD5-209ENST00000514777 CCDC144AA2RUR9 1427 aa19.74■□□□□ 0.75
SMAD5-209ENST00000514777 PLCH1Q4KWH8 1693 aa19.74■□□□□ 0.75
SMAD5-209ENST00000514777 NWD2Q9ULI1 1742 aa19.73■□□□□ 0.75
SMAD5-209ENST00000514777 ABCA3Q99758 1704 aa19.71■□□□□ 0.75
SMAD5-209ENST00000514777 YTHDC2Q9H6S0 1430 aaKnown RBP19.71■□□□□ 0.75
SMAD5-209ENST00000514777 LRP5O75197 1615 aa19.71■□□□□ 0.75
SMAD5-209ENST00000514777 ANKRD30BQ9BXX2 1392 aa19.7■□□□□ 0.74
SMAD5-209ENST00000514777 PIK3C2GO75747 1445 aa19.7■□□□□ 0.74
SMAD5-209ENST00000514777 TNS3Q68CZ2 1445 aa19.7■□□□□ 0.74
SMAD5-209ENST00000514777 SIRT1Q96EB6 747 aa19.7■□□□□ 0.74
SMAD5-209ENST00000514777 PHF8Q9UPP1 1060 aa19.7■□□□□ 0.74
SMAD5-209ENST00000514777 FAM83GA6ND36 823 aa19.69■□□□□ 0.74
SMAD5-209ENST00000514777 SF3B2Q13435 895 aaKnown RBP19.69■□□□□ 0.74
SMAD5-209ENST00000514777 KRT27Q7Z3Y8 459 aa19.69■□□□□ 0.74
SMAD5-209ENST00000514777 PLEKHG5O94827 1062 aa19.68■□□□□ 0.74
SMAD5-209ENST00000514777 PSME1Q06323 249 aa19.67■□□□□ 0.74
SMAD5-209ENST00000514777 SBNO1A3KN83 1393 aa19.67■□□□□ 0.74
SMAD5-209ENST00000514777 HAP1P54257 671 aaPredicted RBP19.66■□□□□ 0.74
SMAD5-209ENST00000514777 CCDC9Q9Y3X0 531 aaKnown RBP19.66■□□□□ 0.74
SMAD5-209ENST00000514777 NRXN1Q9ULB1 1477 aa19.66■□□□□ 0.74
SMAD5-209ENST00000514777 PSDA5PKW4 1024 aaPredicted RBP19.65■□□□□ 0.74
SMAD5-209ENST00000514777 C14orf93Q9H972 538 aaKnown RBP19.65■□□□□ 0.74
SMAD5-209ENST00000514777 NRAPQ86VF7 1730 aa19.64■□□□□ 0.73
SMAD5-209ENST00000514777 HRCP23327 699 aa19.63■□□□□ 0.73
SMAD5-209ENST00000514777 LMOD2Q6P5Q4 547 aa19.63■□□□□ 0.73
SMAD5-209ENST00000514777 MPHOSPH9Q99550 1183 aa19.63■□□□□ 0.73
SMAD5-209ENST00000514777 CFAP70Q5T0N1 1121 aa19.62■□□□□ 0.73
SMAD5-209ENST00000514777 PMFBP1Q8TBY8 1022 aa19.61■□□□□ 0.73
SMAD5-209ENST00000514777 TRPM3Q9HCF6 1732 aaPredicted RBP19.61■□□□□ 0.73
SMAD5-209ENST00000514777 ARHGEF10O15013 1369 aa19.6■□□□□ 0.73
SMAD5-209ENST00000514777 BAG6P46379 1132 aa19.6■□□□□ 0.73
SMAD5-209ENST00000514777 SAFB2Q14151 953 aaKnown RBP eCLIP19.6■□□□□ 0.73
SMAD5-209ENST00000514777 FAM98CQ17RN3 349 aaKnown RBP19.6■□□□□ 0.73
SMAD5-209ENST00000514777 PRAM1Q96QH2 718 aa19.59■□□□□ 0.73
SMAD5-209ENST00000514777 DHX57Q6P158 1386 aaKnown RBP19.58■□□□□ 0.73
SMAD5-209ENST00000514777 EN1Q05925 392 aaPredicted RBP19.58■□□□□ 0.72
SMAD5-209ENST00000514777 FAM182BQ5T319 152 aa19.58■□□□□ 0.72
SMAD5-209ENST00000514777 BTG4Q9NY30 223 aa19.58■□□□□ 0.72
SMAD5-209ENST00000514777 ALS2Q96Q42 1657 aa19.58■□□□□ 0.72
SMAD5-209ENST00000514777 RGPD1P0DJD0 1748 aa19.56■□□□□ 0.72
SMAD5-209ENST00000514777 A0A0G2JS52 829 aa19.56■□□□□ 0.72
SMAD5-209ENST00000514777 MYT1Q01538 1121 aa19.56■□□□□ 0.72
SMAD5-209ENST00000514777 COL14A1Q05707 1796 aaKnown RBP19.56■□□□□ 0.72
SMAD5-209ENST00000514777 ANKARQ7Z5J8 1434 aa19.55■□□□□ 0.72
SMAD5-209ENST00000514777 TNS1Q9HBL0 1735 aaKnown RBP19.54■□□□□ 0.72
SMAD5-209ENST00000514777 CRYBG1Q9Y4K1 1723 aa19.54■□□□□ 0.72
SMAD5-209ENST00000514777 SPATA31A5Q5VU36 1347 aa19.53■□□□□ 0.72
SMAD5-209ENST00000514777 SPATA31A7Q8IWB4 1347 aa19.53■□□□□ 0.72
SMAD5-209ENST00000514777 DLC1Q96QB1 1528 aa19.53■□□□□ 0.72
SMAD5-209ENST00000514777 ADGRB2O60241 1585 aa19.53■□□□□ 0.72
SMAD5-209ENST00000514777 THSD7AQ9UPZ6 1657 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms