RNA–Protein interactions for RNA: ENST00000514588.1

CCND3-221, Transcript of cyclin D3, humanhuman

TSL 4

Gene CCND3, Length 490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-221ENST00000514588 LRPPRCP42704 1394 aaKnown RBP35.8■■■■□ 3.32
CCND3-221ENST00000514588 C8orf37Q96NL8 207 aa35.79■■■■□ 3.32
CCND3-221ENST00000514588 PIK3C2GO75747 1445 aa35.79■■■■□ 3.32
CCND3-221ENST00000514588 ACIN1Q9UKV3 1341 aaKnown RBP35.79■■■■□ 3.32
CCND3-221ENST00000514588 TMEM132EQ6IEE7 984 aa35.77■■■■□ 3.32
CCND3-221ENST00000514588 WAPLQ7Z5K2 1190 aa35.77■■■■□ 3.32
CCND3-221ENST00000514588 ABCC11Q96J66 1382 aa35.76■■■■□ 3.32
CCND3-221ENST00000514588 CDK12Q9NYV4 1490 aaPredicted RBP35.74■■■■□ 3.31
CCND3-221ENST00000514588 ESCO1Q5FWF5 840 aa35.73■■■■□ 3.31
CCND3-221ENST00000514588 ADAMTS2O95450 1211 aa35.72■■■■□ 3.31
CCND3-221ENST00000514588 PLEKHH1Q9ULM0 1364 aa35.71■■■■□ 3.31
CCND3-221ENST00000514588 KNDC1Q76NI1 1749 aa35.7■■■■□ 3.31
CCND3-221ENST00000514588 YTHDC2Q9H6S0 1430 aaKnown RBP35.69■■■■□ 3.3
CCND3-221ENST00000514588 NPHP3Q7Z494 1330 aa35.68■■■■□ 3.3
CCND3-221ENST00000514588 UPF1Q92900 1129 aaKnown RBP eCLIP35.68■■■■□ 3.3
CCND3-221ENST00000514588 NGLY1Q96IV0 654 aa35.68■■■■□ 3.3
CCND3-221ENST00000514588 QTRT2Q9H974 415 aaKnown RBP35.68■■■■□ 3.3
CCND3-221ENST00000514588 RAB3GAP2Q9H2M9 1393 aa35.66■■■■□ 3.3
CCND3-221ENST00000514588 C14orf93Q9H972 538 aaKnown RBP35.66■■■■□ 3.3
CCND3-221ENST00000514588 NUTM2FA1L443 756 aa35.65■■■■□ 3.3
CCND3-221ENST00000514588 PXDNQ92626 1479 aa35.65■■■■□ 3.3
CCND3-221ENST00000514588 NRXN1Q9ULB1 1477 aa35.65■■■■□ 3.3
CCND3-221ENST00000514588 FOXO3O43524 673 aa35.64■■■■□ 3.3
CCND3-221ENST00000514588 RBM6P78332 1123 aaKnown RBP35.64■■■■□ 3.3
CCND3-221ENST00000514588 COL22A1Q8NFW1 1626 aaPredicted RBP35.64■■■■□ 3.3
CCND3-221ENST00000514588 MYOM2P54296 1465 aa35.62■■■■□ 3.29
CCND3-221ENST00000514588 XPCQ01831 940 aaPredicted RBP35.61■■■■□ 3.29
CCND3-221ENST00000514588 SIRT1Q96EB6 747 aa35.61■■■■□ 3.29
CCND3-221ENST00000514588 RGS12O14924 1447 aa35.6■■■■□ 3.29
CCND3-221ENST00000514588 CFAP70Q5T0N1 1121 aa35.6■■■■□ 3.29
CCND3-221ENST00000514588 FMN2Q9NZ56 1722 aa35.57■■■■□ 3.29
CCND3-221ENST00000514588 USP21Q9UK80 565 aa35.56■■■■□ 3.28
CCND3-221ENST00000514588 DHX57Q6P158 1386 aaKnown RBP35.55■■■■□ 3.28
CCND3-221ENST00000514588 FNBP4Q8N3X1 1017 aaPredicted RBP35.55■■■■□ 3.28
CCND3-221ENST00000514588 TRPC5Q9UL62 973 aaPredicted RBP35.5■■■■□ 3.27
CCND3-221ENST00000514588 KIF1AQ12756 1690 aa35.48■■■■□ 3.27
CCND3-221ENST00000514588 PRAM1Q96QH2 718 aa35.47■■■■□ 3.27
CCND3-221ENST00000514588 ATRNO75882 1429 aa35.46■■■■□ 3.27
CCND3-221ENST00000514588 SPATA31A3Q5VYP0 1347 aa35.45■■■■□ 3.27
CCND3-221ENST00000514588 SAFB2Q14151 953 aaKnown RBP eCLIP35.44■■■■□ 3.26
CCND3-221ENST00000514588 KRT28Q7Z3Y7 464 aa35.43■■■■□ 3.26
CCND3-221ENST00000514588 DLC1Q96QB1 1528 aa35.42■■■■□ 3.26
CCND3-221ENST00000514588 BCL9LQ86UU0 1499 aa35.42■■■■□ 3.26
CCND3-221ENST00000514588 PHF8Q9UPP1 1060 aa35.42■■■■□ 3.26
CCND3-221ENST00000514588 MARF1Q9Y4F3 1742 aaKnown RBP35.41■■■■□ 3.26
CCND3-221ENST00000514588 ADGRB1O14514 1584 aa35.41■■■■□ 3.26
CCND3-221ENST00000514588 RGPD8O14715 1765 aaPredicted RBP35.39■■■■□ 3.26
CCND3-221ENST00000514588 POGKQ9P215 609 aa35.39■■■■□ 3.26
CCND3-221ENST00000514588 HRCP23327 699 aa35.36■■■■□ 3.25
CCND3-221ENST00000514588 KDM2AQ9Y2K7 1162 aa35.36■■■■□ 3.25
CCND3-221ENST00000514588 DCAF11Q8TEB1 546 aa35.35■■■■□ 3.25
CCND3-221ENST00000514588 TNS3Q68CZ2 1445 aa35.33■■■■□ 3.25
CCND3-221ENST00000514588 TRAK1Q9UPV9 953 aa35.33■■■■□ 3.25
CCND3-221ENST00000514588 PSME1Q06323 249 aa35.32■■■■□ 3.24
CCND3-221ENST00000514588 ATAD2Q6PL18 1390 aa35.32■■■■□ 3.24
CCND3-221ENST00000514588 ADGRB2O60241 1585 aa35.32■■■■□ 3.24
CCND3-221ENST00000514588 ANKARQ7Z5J8 1434 aa35.32■■■■□ 3.24
CCND3-221ENST00000514588 USP32Q8NFA0 1604 aa35.3■■■■□ 3.24
CCND3-221ENST00000514588 SBNO1A3KN83 1393 aa35.29■■■■□ 3.24
CCND3-221ENST00000514588 SLIT2O94813 1529 aa35.29■■■■□ 3.24
CCND3-221ENST00000514588 GJD4Q96KN9 370 aaPredicted RBP35.28■■■■□ 3.24
CCND3-221ENST00000514588 STAC3Q96MF2 364 aa35.28■■■■□ 3.24
CCND3-221ENST00000514588 UNC5CLQ8IV45 518 aa35.27■■■■□ 3.24
CCND3-221ENST00000514588 HIRIP3Q9BW71 556 aaPredicted RBP35.27■■■■□ 3.24
CCND3-221ENST00000514588 PMFBP1Q8TBY8 1022 aa35.26■■■■□ 3.24
CCND3-221ENST00000514588 CABLES1Q8TDN4 633 aa35.26■■■■□ 3.24
CCND3-221ENST00000514588 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.26■■■■□ 3.23
CCND3-221ENST00000514588 MINK1Q8N4C8 1332 aaPredicted RBP35.25■■■■□ 3.23
CCND3-221ENST00000514588 HAP1P54257 671 aaPredicted RBP35.22■■■■□ 3.23
CCND3-221ENST00000514588 LMOD2Q6P5Q4 547 aa35.22■■■■□ 3.23
CCND3-221ENST00000514588 ARHGEF10O15013 1369 aa35.22■■■■□ 3.23
CCND3-221ENST00000514588 PLEKHG5O94827 1062 aa35.2■■■■□ 3.23
CCND3-221ENST00000514588 PRR36Q9H6K5 1346 aa35.2■■■■□ 3.23
CCND3-221ENST00000514588 RALGAPBQ86X10 1494 aa35.2■■■■□ 3.23
CCND3-221ENST00000514588 GLI3P10071 1580 aa35.18■■■■□ 3.22
CCND3-221ENST00000514588 EIF3AQ14152 1382 aaKnown RBP35.18■■■■□ 3.22
CCND3-221ENST00000514588 TULP4Q9NRJ4 1543 aa35.17■■■■□ 3.22
CCND3-221ENST00000514588 WASLO00401 505 aaPredicted RBP35.17■■■■□ 3.22
CCND3-221ENST00000514588 ABCA3Q99758 1704 aa35.16■■■■□ 3.22
CCND3-221ENST00000514588 TRPM3Q9HCF6 1732 aaPredicted RBP35.13■■■■□ 3.21
CCND3-221ENST00000514588 GPRASP1Q5JY77 1395 aa35.12■■■■□ 3.21
CCND3-221ENST00000514588 VPS72Q15906 364 aa35.1■■■■□ 3.21
CCND3-221ENST00000514588 PLCH1Q4KWH8 1693 aa35.1■■■■□ 3.21
CCND3-221ENST00000514588 ARHGEF28Q8N1W1 1705 aaKnown RBP35.09■■■■□ 3.21
CCND3-221ENST00000514588 FAM83GA6ND36 823 aa35.08■■■■□ 3.21
CCND3-221ENST00000514588 NWD2Q9ULI1 1742 aa35.08■■■■□ 3.21
CCND3-221ENST00000514588 ALS2Q96Q42 1657 aa35.07■■■■□ 3.2
CCND3-221ENST00000514588 EP400Q96L91 3159 aa35.07■■■■□ 3.2
CCND3-221ENST00000514588 CCDC125Q86Z20 511 aa35.06■■■■□ 3.2
CCND3-221ENST00000514588 NGDNQ8NEJ9 315 aaKnown RBP35.05■■■■□ 3.2
CCND3-221ENST00000514588 ATP7BP35670 1465 aa35.03■■■■□ 3.2
CCND3-221ENST00000514588 SEPT12Q8IYM1 358 aa35.02■■■■□ 3.2
CCND3-221ENST00000514588 CCDC9Q9Y3X0 531 aaKnown RBP35.02■■■■□ 3.2
CCND3-221ENST00000514588 NUDT16Q96DE0 195 aaKnown RBP35.01■■■■□ 3.2
CCND3-221ENST00000514588 ONECUT3O60422 494 aaPredicted RBP34.99■■■■□ 3.19
CCND3-221ENST00000514588 BRWD3Q6RI45 1802 aa34.99■■■■□ 3.19
CCND3-221ENST00000514588 KIAA1210Q9ULL0 1709 aa34.98■■■■□ 3.19
CCND3-221ENST00000514588 PAK3O75914 559 aaPredicted RBP34.97■■■■□ 3.19
CCND3-221ENST00000514588 ITSN1Q15811 1721 aa34.96■■■■□ 3.19
CCND3-221ENST00000514588 CDK19Q9BWU1 502 aa34.96■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms