RNA–Protein interactions for RNA: ENST00000513287.5

CLDND1-226, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDND1, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-226ENST00000513287 ABCC11Q96J66 1382 aa37.57■■■■□ 3.61
CLDND1-226ENST00000513287 RGL3Q3MIN7 710 aa37.57■■■■□ 3.6
CLDND1-226ENST00000513287 LRPPRCP42704 1394 aaKnown RBP37.56■■■■□ 3.6
CLDND1-226ENST00000513287 PIK3C2GO75747 1445 aa37.54■■■■□ 3.6
CLDND1-226ENST00000513287 KNDC1Q76NI1 1749 aa37.52■■■■□ 3.6
CLDND1-226ENST00000513287 SIRT1Q96EB6 747 aa37.51■■■■□ 3.6
CLDND1-226ENST00000513287 UPF1Q92900 1129 aaKnown RBP eCLIP37.49■■■■□ 3.59
CLDND1-226ENST00000513287 C8orf37Q96NL8 207 aa37.49■■■■□ 3.59
CLDND1-226ENST00000513287 NPHP3Q7Z494 1330 aa37.49■■■■□ 3.59
CLDND1-226ENST00000513287 COL22A1Q8NFW1 1626 aaPredicted RBP37.48■■■■□ 3.59
CLDND1-226ENST00000513287 RBM6P78332 1123 aaKnown RBP37.46■■■■□ 3.59
CLDND1-226ENST00000513287 QTRT2Q9H974 415 aaKnown RBP37.46■■■■□ 3.59
CLDND1-226ENST00000513287 ESCO1Q5FWF5 840 aa37.45■■■■□ 3.59
CLDND1-226ENST00000513287 WAPLQ7Z5K2 1190 aa37.43■■■■□ 3.58
CLDND1-226ENST00000513287 C14orf93Q9H972 538 aaKnown RBP37.43■■■■□ 3.58
CLDND1-226ENST00000513287 NRXN1Q9ULB1 1477 aa37.43■■■■□ 3.58
CLDND1-226ENST00000513287 NGLY1Q96IV0 654 aa37.42■■■■□ 3.58
CLDND1-226ENST00000513287 STK26Q9P289 416 aa37.42■■■■□ 3.58
CLDND1-226ENST00000513287 YTHDC2Q9H6S0 1430 aaKnown RBP37.42■■■■□ 3.58
CLDND1-226ENST00000513287 PXDNQ92626 1479 aa37.41■■■■□ 3.58
CLDND1-226ENST00000513287 TMEM132EQ6IEE7 984 aa37.4■■■■□ 3.58
CLDND1-226ENST00000513287 MYOM2P54296 1465 aa37.39■■■■□ 3.58
CLDND1-226ENST00000513287 FNBP4Q8N3X1 1017 aaPredicted RBP37.39■■■■□ 3.58
CLDND1-226ENST00000513287 ADAMTS2O95450 1211 aa37.38■■■■□ 3.57
CLDND1-226ENST00000513287 FOXO3O43524 673 aa37.35■■■■□ 3.57
CLDND1-226ENST00000513287 PLEKHH1Q9ULM0 1364 aa37.34■■■■□ 3.57
CLDND1-226ENST00000513287 FMN2Q9NZ56 1722 aa37.33■■■■□ 3.57
CLDND1-226ENST00000513287 RGS12O14924 1447 aa37.33■■■■□ 3.57
CLDND1-226ENST00000513287 DHX57Q6P158 1386 aaKnown RBP37.32■■■■□ 3.57
CLDND1-226ENST00000513287 USP21Q9UK80 565 aa37.31■■■■□ 3.56
CLDND1-226ENST00000513287 TRPC5Q9UL62 973 aaPredicted RBP37.31■■■■□ 3.56
CLDND1-226ENST00000513287 RAB3GAP2Q9H2M9 1393 aa37.3■■■■□ 3.56
CLDND1-226ENST00000513287 KIF1AQ12756 1690 aa37.29■■■■□ 3.56
CLDND1-226ENST00000513287 CFAP70Q5T0N1 1121 aa37.26■■■■□ 3.56
CLDND1-226ENST00000513287 MARF1Q9Y4F3 1742 aaKnown RBP37.26■■■■□ 3.56
CLDND1-226ENST00000513287 HRCP23327 699 aa37.24■■■■□ 3.55
CLDND1-226ENST00000513287 ATRNO75882 1429 aa37.24■■■■□ 3.55
CLDND1-226ENST00000513287 STAC3Q96MF2 364 aa37.23■■■■□ 3.55
CLDND1-226ENST00000513287 DLC1Q96QB1 1528 aa37.22■■■■□ 3.55
CLDND1-226ENST00000513287 NUTM2FA1L443 756 aa37.22■■■■□ 3.55
CLDND1-226ENST00000513287 SPATA31A3Q5VYP0 1347 aa37.21■■■■□ 3.55
CLDND1-226ENST00000513287 XPCQ01831 940 aaPredicted RBP37.19■■■■□ 3.54
CLDND1-226ENST00000513287 BCL9LQ86UU0 1499 aa37.19■■■■□ 3.54
CLDND1-226ENST00000513287 KRT28Q7Z3Y7 464 aa37.15■■■■□ 3.54
CLDND1-226ENST00000513287 PRAM1Q96QH2 718 aa37.14■■■■□ 3.54
CLDND1-226ENST00000513287 PHF8Q9UPP1 1060 aa37.14■■■■□ 3.54
CLDND1-226ENST00000513287 RGPD8O14715 1765 aaPredicted RBP37.14■■■■□ 3.54
CLDND1-226ENST00000513287 PSME1Q06323 249 aa37.13■■■■□ 3.53
CLDND1-226ENST00000513287 ADGRB1O14514 1584 aa37.12■■■■□ 3.53
CLDND1-226ENST00000513287 ATAD2Q6PL18 1390 aa37.12■■■■□ 3.53
CLDND1-226ENST00000513287 TNKS1BP1Q9C0C2 1729 aaKnown RBP37.11■■■■□ 3.53
CLDND1-226ENST00000513287 ANKARQ7Z5J8 1434 aa37.1■■■■□ 3.53
CLDND1-226ENST00000513287 ADGRB2O60241 1585 aa37.1■■■■□ 3.53
CLDND1-226ENST00000513287 SBNO1A3KN83 1393 aa37.09■■■■□ 3.53
CLDND1-226ENST00000513287 SLIT2O94813 1529 aa37.08■■■■□ 3.53
CLDND1-226ENST00000513287 GJD4Q96KN9 370 aaPredicted RBP37.07■■■■□ 3.52
CLDND1-226ENST00000513287 POGKQ9P215 609 aa37.07■■■■□ 3.52
CLDND1-226ENST00000513287 TNS3Q68CZ2 1445 aa37.07■■■■□ 3.52
CLDND1-226ENST00000513287 UNC5CLQ8IV45 518 aa37.04■■■■□ 3.52
CLDND1-226ENST00000513287 USP32Q8NFA0 1604 aa37.03■■■■□ 3.52
CLDND1-226ENST00000513287 DCAF11Q8TEB1 546 aa37.01■■■■□ 3.52
CLDND1-226ENST00000513287 ARHGEF10O15013 1369 aa37.01■■■■□ 3.51
CLDND1-226ENST00000513287 SAFB2Q14151 953 aaKnown RBP eCLIP37■■■■□ 3.51
CLDND1-226ENST00000513287 EIF3AQ14152 1382 aaKnown RBP37■■■■□ 3.51
CLDND1-226ENST00000513287 CCDC125Q86Z20 511 aa36.98■■■■□ 3.51
CLDND1-226ENST00000513287 TRAK1Q9UPV9 953 aa36.96■■■■□ 3.51
CLDND1-226ENST00000513287 KDM2AQ9Y2K7 1162 aa36.94■■■■□ 3.5
CLDND1-226ENST00000513287 NWD2Q9ULI1 1742 aa36.92■■■■□ 3.5
CLDND1-226ENST00000513287 RALGAPBQ86X10 1494 aa36.92■■■■□ 3.5
CLDND1-226ENST00000513287 GLI3P10071 1580 aa36.91■■■■□ 3.5
CLDND1-226ENST00000513287 TULP4Q9NRJ4 1543 aa36.9■■■■□ 3.5
CLDND1-226ENST00000513287 WASLO00401 505 aaPredicted RBP36.9■■■■□ 3.5
CLDND1-226ENST00000513287 HAP1P54257 671 aaPredicted RBP36.89■■■■□ 3.5
CLDND1-226ENST00000513287 PMFBP1Q8TBY8 1022 aa36.89■■■■□ 3.5
CLDND1-226ENST00000513287 ABCA3Q99758 1704 aa36.89■■■■□ 3.5
CLDND1-226ENST00000513287 EP400Q96L91 3159 aa36.88■■■■□ 3.5
CLDND1-226ENST00000513287 VPS72Q15906 364 aa36.88■■■■□ 3.49
CLDND1-226ENST00000513287 TRPM3Q9HCF6 1732 aaPredicted RBP36.88■■■■□ 3.49
CLDND1-226ENST00000513287 CABLES1Q8TDN4 633 aa36.87■■■■□ 3.49
CLDND1-226ENST00000513287 ONECUT3O60422 494 aaPredicted RBP36.86■■■■□ 3.49
CLDND1-226ENST00000513287 GPRASP1Q5JY77 1395 aa36.86■■■■□ 3.49
CLDND1-226ENST00000513287 MINK1Q8N4C8 1332 aaPredicted RBP36.85■■■■□ 3.49
CLDND1-226ENST00000513287 HIRIP3Q9BW71 556 aaPredicted RBP36.85■■■■□ 3.49
CLDND1-226ENST00000513287 PRR36Q9H6K5 1346 aa36.85■■■■□ 3.49
CLDND1-226ENST00000513287 PLCH1Q4KWH8 1693 aa36.83■■■■□ 3.49
CLDND1-226ENST00000513287 ALS2Q96Q42 1657 aa36.83■■■■□ 3.49
CLDND1-226ENST00000513287 LMOD2Q6P5Q4 547 aa36.82■■■■□ 3.48
CLDND1-226ENST00000513287 ARHGEF28Q8N1W1 1705 aaKnown RBP36.8■■■■□ 3.48
CLDND1-226ENST00000513287 FAM83GA6ND36 823 aa36.79■■■■□ 3.48
CLDND1-226ENST00000513287 KIAA1210Q9ULL0 1709 aa36.78■■■■□ 3.48
CLDND1-226ENST00000513287 ITSN1Q15811 1721 aa36.74■■■■□ 3.47
CLDND1-226ENST00000513287 BRWD3Q6RI45 1802 aa36.73■■■■□ 3.47
CLDND1-226ENST00000513287 SEPT12Q8IYM1 358 aa36.73■■■■□ 3.47
CLDND1-226ENST00000513287 NGDNQ8NEJ9 315 aaKnown RBP36.73■■■■□ 3.47
CLDND1-226ENST00000513287 BLMP54132 1417 aaPredicted RBP36.73■■■■□ 3.47
CLDND1-226ENST00000513287 ATP7BP35670 1465 aa36.71■■■■□ 3.47
CLDND1-226ENST00000513287 NUDT16Q96DE0 195 aaKnown RBP36.7■■■■□ 3.47
CLDND1-226ENST00000513287 COL14A1Q05707 1796 aaKnown RBP36.7■■■■□ 3.47
CLDND1-226ENST00000513287 ZRANB1Q9UGI0 708 aa36.69■■■■□ 3.46
CLDND1-226ENST00000513287 NRAPQ86VF7 1730 aa36.68■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms