RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 SIRT1Q96EB6 747 aa13.02□□□□□ -0.33
DHFR-206ENST00000513048 SLC26A8Q96RN1 970 aa13.02□□□□□ -0.33
DHFR-206ENST00000513048 LMTK3Q96Q04 1460 aa13.02□□□□□ -0.33
DHFR-206ENST00000513048 TULP4Q9NRJ4 1543 aa13.02□□□□□ -0.33
DHFR-206ENST00000513048 XRN1Q8IZH2 1706 aaKnown RBP13.02□□□□□ -0.33
DHFR-206ENST00000513048 NPHP4O75161 1426 aaPredicted RBP13.01□□□□□ -0.33
DHFR-206ENST00000513048 FAM135BQ49AJ0 1406 aa13.01□□□□□ -0.33
DHFR-206ENST00000513048 MYOM1P52179 1685 aa13.01□□□□□ -0.33
DHFR-206ENST00000513048 PIK3R4Q99570 1358 aa13□□□□□ -0.33
DHFR-206ENST00000513048 PLEKHH1Q9ULM0 1364 aa13□□□□□ -0.33
DHFR-206ENST00000513048 SLC24A1O60721 1099 aa13□□□□□ -0.33
DHFR-206ENST00000513048 BCANQ96GW7 911 aa13□□□□□ -0.33
DHFR-206ENST00000513048 PRAM1Q96QH2 718 aa13□□□□□ -0.33
DHFR-206ENST00000513048 ROBO2Q9HCK4 1378 aa12.99□□□□□ -0.33
DHFR-206ENST00000513048 NCKAP5LQ9HCH0 1330 aa12.99□□□□□ -0.33
DHFR-206ENST00000513048 CHD2O14647 1828 aaKnown RBP12.98□□□□□ -0.33
DHFR-206ENST00000513048 MIER1Q8N108 512 aa12.98□□□□□ -0.33
DHFR-206ENST00000513048 PTCH1Q13635 1447 aa12.97□□□□□ -0.33
DHFR-206ENST00000513048 CAPN15O75808 1086 aa12.97□□□□□ -0.33
DHFR-206ENST00000513048 CDCA8Q53HL2 280 aa12.97□□□□□ -0.33
DHFR-206ENST00000513048 WAPLQ7Z5K2 1190 aa12.97□□□□□ -0.33
DHFR-206ENST00000513048 PUS7Q96PZ0 661 aaKnown RBP12.97□□□□□ -0.33
DHFR-206ENST00000513048 SLC4A2P04920 1241 aa12.96□□□□□ -0.33
DHFR-206ENST00000513048 POLR3GLQ9BT43 218 aa12.96□□□□□ -0.33
DHFR-206ENST00000513048 POGKQ9P215 609 aa12.96□□□□□ -0.33
DHFR-206ENST00000513048 AMOTL2Q9Y2J4 779 aa12.96□□□□□ -0.33
DHFR-206ENST00000513048 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.96□□□□□ -0.34
DHFR-206ENST00000513048 STRCQ7RTU9 1775 aa12.95□□□□□ -0.34
DHFR-206ENST00000513048 HSPA2P54652 639 aa12.95□□□□□ -0.34
DHFR-206ENST00000513048 SAFB2Q14151 953 aaKnown RBP eCLIP12.95□□□□□ -0.34
DHFR-206ENST00000513048 ADGRB2O60241 1585 aa12.94□□□□□ -0.34
DHFR-206ENST00000513048 NWD1Q149M9 1564 aa12.94□□□□□ -0.34
DHFR-206ENST00000513048 EVC2Q86UK5 1308 aa12.94□□□□□ -0.34
DHFR-206ENST00000513048 MINK1Q8N4C8 1332 aaPredicted RBP12.94□□□□□ -0.34
DHFR-206ENST00000513048 PER1O15534 1290 aaPredicted RBP12.92□□□□□ -0.34
DHFR-206ENST00000513048 KCNA6P17658 529 aa12.92□□□□□ -0.34
DHFR-206ENST00000513048 CDK19Q9BWU1 502 aa12.9□□□□□ -0.34
DHFR-206ENST00000513048 PANK3Q9H999 370 aa12.9□□□□□ -0.34
DHFR-206ENST00000513048 CABP2Q9NPB3 220 aa12.9□□□□□ -0.34
DHFR-206ENST00000513048 SPINK5Q9NQ38 1064 aaPredicted RBP12.9□□□□□ -0.34
DHFR-206ENST00000513048 WASLO00401 505 aaPredicted RBP12.89□□□□□ -0.35
DHFR-206ENST00000513048 STRCP1A6NGW2 1772 aa12.89□□□□□ -0.35
DHFR-206ENST00000513048 ATAD2Q6PL18 1390 aa12.88□□□□□ -0.35
DHFR-206ENST00000513048 CD163L1Q9NR16 1453 aa12.87□□□□□ -0.35
DHFR-206ENST00000513048 NINLQ9Y2I6 1382 aa12.87□□□□□ -0.35
DHFR-206ENST00000513048 ANP32CO43423 234 aa12.87□□□□□ -0.35
DHFR-206ENST00000513048 CARD14Q9BXL6 1004 aa12.87□□□□□ -0.35
DHFR-206ENST00000513048 SLC12A5Q9H2X9 1139 aa12.87□□□□□ -0.35
DHFR-206ENST00000513048 NALCNQ8IZF0 1738 aa12.87□□□□□ -0.35
DHFR-206ENST00000513048 SRPK2P78362 688 aaKnown RBP12.86□□□□□ -0.35
DHFR-206ENST00000513048 PRKRIP1Q9H875 184 aaPredicted RBP12.86□□□□□ -0.35
DHFR-206ENST00000513048 TOPAZ1Q8N9V7 1692 aa12.86□□□□□ -0.35
DHFR-206ENST00000513048 PRR36Q9H6K5 1346 aa12.86□□□□□ -0.35
DHFR-206ENST00000513048 NKTRP30414 1462 aaKnown RBP12.85□□□□□ -0.35
DHFR-206ENST00000513048 ATP7BP35670 1465 aa12.85□□□□□ -0.35
DHFR-206ENST00000513048 USP32Q8NFA0 1604 aa12.85□□□□□ -0.35
DHFR-206ENST00000513048 ANKRD36BQ8N2N9 1353 aa12.84□□□□□ -0.35
DHFR-206ENST00000513048 AMER1Q5JTC6 1135 aaPredicted RBP12.84□□□□□ -0.35
DHFR-206ENST00000513048 CDC42BPGQ6DT37 1551 aa12.84□□□□□ -0.35
DHFR-206ENST00000513048 FMN2Q9NZ56 1722 aa12.84□□□□□ -0.35
DHFR-206ENST00000513048 NPC1L1Q9UHC9 1359 aa12.83□□□□□ -0.36
DHFR-206ENST00000513048 ADGRL3Q9HAR2 1447 aa12.83□□□□□ -0.36
DHFR-206ENST00000513048 CCER2I3L3R5 266 aa12.83□□□□□ -0.36
DHFR-206ENST00000513048 PARD3Q8TEW0 1356 aa12.82□□□□□ -0.36
DHFR-206ENST00000513048 DSG3P32926 999 aa12.82□□□□□ -0.36
DHFR-206ENST00000513048 TMC1Q8TDI8 760 aa12.82□□□□□ -0.36
DHFR-206ENST00000513048 NUDT16Q96DE0 195 aaKnown RBP12.82□□□□□ -0.36
DHFR-206ENST00000513048 A0A1W2PP64 1363 aa12.81□□□□□ -0.36
DHFR-206ENST00000513048 KTN1Q86UP2 1357 aaKnown RBP12.81□□□□□ -0.36
DHFR-206ENST00000513048 CABP1Q9NZU7 370 aa12.81□□□□□ -0.36
DHFR-206ENST00000513048 AKAP12Q02952 1782 aa12.81□□□□□ -0.36
DHFR-206ENST00000513048 CPSF1Q10570 1443 aaKnown RBP12.8□□□□□ -0.36
DHFR-206ENST00000513048 PPIP5K1Q6PFW1 1433 aa12.8□□□□□ -0.36
DHFR-206ENST00000513048 ANKARQ7Z5J8 1434 aa12.8□□□□□ -0.36
DHFR-206ENST00000513048 NSD3Q9BZ95 1437 aa12.8□□□□□ -0.36
DHFR-206ENST00000513048 RGPD8O14715 1765 aaPredicted RBP12.8□□□□□ -0.36
DHFR-206ENST00000513048 CCDC61Q9Y6R9 512 aa12.8□□□□□ -0.36
DHFR-206ENST00000513048 MON2Q7Z3U7 1717 aa12.79□□□□□ -0.36
DHFR-206ENST00000513048 XIRP1Q702N8 1843 aaKnown RBP12.79□□□□□ -0.36
DHFR-206ENST00000513048 RALBP1Q15311 655 aa12.79□□□□□ -0.36
DHFR-206ENST00000513048 SAMD1Q6SPF0 538 aaPredicted RBP12.79□□□□□ -0.36
DHFR-206ENST00000513048 RBM33Q96EV2 1170 aaKnown RBP12.79□□□□□ -0.36
DHFR-206ENST00000513048 KNSTRNQ9Y448 316 aa12.79□□□□□ -0.36
DHFR-206ENST00000513048 ITSN1Q15811 1721 aa12.79□□□□□ -0.36
DHFR-206ENST00000513048 NCOA3Q9Y6Q9 1424 aa12.79□□□□□ -0.36
DHFR-206ENST00000513048 PLEKHG3A1L390 1219 aa12.78□□□□□ -0.36
DHFR-206ENST00000513048 PROSER2Q86WR7 435 aaPredicted RBP12.78□□□□□ -0.36
DHFR-206ENST00000513048 ZNF219Q9P2Y4 722 aaPredicted RBP12.78□□□□□ -0.36
DHFR-206ENST00000513048 CCDC184Q52MB2 194 aa12.77□□□□□ -0.37
DHFR-206ENST00000513048 CC2D1BQ5T0F9 858 aaKnown RBP12.77□□□□□ -0.37
DHFR-206ENST00000513048 TERF2IPQ9NYB0 399 aa12.77□□□□□ -0.37
DHFR-206ENST00000513048 TMEM94Q12767 1356 aa12.77□□□□□ -0.37
DHFR-206ENST00000513048 LRRC7Q96NW7 1537 aa12.76□□□□□ -0.37
DHFR-206ENST00000513048 NRKQ7Z2Y5 1582 aa12.76□□□□□ -0.37
DHFR-206ENST00000513048 POLR3AO14802 1390 aaPredicted RBP12.75□□□□□ -0.37
DHFR-206ENST00000513048 HDGFL2Q7Z4V5 671 aaPredicted RBP12.75□□□□□ -0.37
DHFR-206ENST00000513048 MYBBP1AQ9BQG0 1328 aaKnown RBP12.75□□□□□ -0.37
DHFR-206ENST00000513048 ZNF335Q9H4Z2 1342 aaPredicted RBP12.75□□□□□ -0.37
DHFR-206ENST00000513048 ANKRD26Q9UPS8 1709 aa12.75□□□□□ -0.37
DHFR-206ENST00000513048 EDC4Q6P2E9 1401 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms