RNA–Protein interactions for RNA: ENST00000512385.5

SNCAIP-217, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-217ENST00000512385 PANK3Q9H999 370 aa18.2■□□□□ 0.5
SNCAIP-217ENST00000512385 C20orf194Q5TEA3 1177 aa18.19■□□□□ 0.5
SNCAIP-217ENST00000512385 RIMS2Q9UQ26 1411 aa18.19■□□□□ 0.5
SNCAIP-217ENST00000512385 WAPLQ7Z5K2 1190 aa18.18■□□□□ 0.5
SNCAIP-217ENST00000512385 SLC26A8Q96RN1 970 aa18.18■□□□□ 0.5
SNCAIP-217ENST00000512385 CC2D1BQ5T0F9 858 aaKnown RBP18.18■□□□□ 0.5
SNCAIP-217ENST00000512385 NEURL4Q96JN8 1562 aa18.17■□□□□ 0.5
SNCAIP-217ENST00000512385 LRPPRCP42704 1394 aaKnown RBP18.16■□□□□ 0.5
SNCAIP-217ENST00000512385 CENPJQ9HC77 1338 aaPredicted RBP18.16■□□□□ 0.5
SNCAIP-217ENST00000512385 ADGRB1O14514 1584 aa18.16■□□□□ 0.5
SNCAIP-217ENST00000512385 MINK1Q8N4C8 1332 aaPredicted RBP18.15■□□□□ 0.5
SNCAIP-217ENST00000512385 MS4A1P11836 297 aa18.15■□□□□ 0.5
SNCAIP-217ENST00000512385 PRAM1Q96QH2 718 aa18.15■□□□□ 0.5
SNCAIP-217ENST00000512385 IQGAP1P46940 1657 aa18.15■□□□□ 0.5
SNCAIP-217ENST00000512385 FER1L4A9Z1Z3 1794 aa18.14■□□□□ 0.49
SNCAIP-217ENST00000512385 TXNDC2Q86VQ3 553 aa18.14■□□□□ 0.49
SNCAIP-217ENST00000512385 C3P01024 1663 aa18.14■□□□□ 0.49
SNCAIP-217ENST00000512385 FRAT2O75474 233 aaPredicted RBP18.13■□□□□ 0.49
SNCAIP-217ENST00000512385 CABP2Q9NPB3 220 aa18.13■□□□□ 0.49
SNCAIP-217ENST00000512385 MYBBP1AQ9BQG0 1328 aaKnown RBP18.13■□□□□ 0.49
SNCAIP-217ENST00000512385 ASXL1Q8IXJ9 1541 aa18.13■□□□□ 0.49
SNCAIP-217ENST00000512385 METP08581 1390 aa18.13■□□□□ 0.49
SNCAIP-217ENST00000512385 POLR1AO95602 1720 aaPredicted RBP18.12■□□□□ 0.49
SNCAIP-217ENST00000512385 SLC12A5Q9H2X9 1139 aa18.12■□□□□ 0.49
SNCAIP-217ENST00000512385 PER1O15534 1290 aaPredicted RBP18.11■□□□□ 0.49
SNCAIP-217ENST00000512385 EIF3AQ14152 1382 aaKnown RBP18.11■□□□□ 0.49
SNCAIP-217ENST00000512385 LAMC1P11047 1609 aa18.11■□□□□ 0.49
SNCAIP-217ENST00000512385 POGKQ9P215 609 aa18.11■□□□□ 0.49
SNCAIP-217ENST00000512385 PTPRMP28827 1452 aa18.1■□□□□ 0.49
SNCAIP-217ENST00000512385 TMEM2Q9UHN6 1383 aa18.1■□□□□ 0.49
SNCAIP-217ENST00000512385 PLEKHH1Q9ULM0 1364 aa18.1■□□□□ 0.49
SNCAIP-217ENST00000512385 ZFYVE9O95405 1425 aa18.1■□□□□ 0.49
SNCAIP-217ENST00000512385 RIMS1Q86UR5 1692 aaKnown RBP18.09■□□□□ 0.49
SNCAIP-217ENST00000512385 ALKQ9UM73 1620 aa18.08■□□□□ 0.48
SNCAIP-217ENST00000512385 RBM33Q96EV2 1170 aaKnown RBP18.08■□□□□ 0.48
SNCAIP-217ENST00000512385 DAXXQ9UER7 740 aaPredicted RBP18.08■□□□□ 0.48
SNCAIP-217ENST00000512385 BRD4O60885 1362 aaPredicted RBP18.08■□□□□ 0.48
SNCAIP-217ENST00000512385 UBE2Q2Q8WVN8 375 aa18.07■□□□□ 0.48
SNCAIP-217ENST00000512385 KIAA1210Q9ULL0 1709 aa18.07■□□□□ 0.48
SNCAIP-217ENST00000512385 YTHDC2Q9H6S0 1430 aaKnown RBP18.07■□□□□ 0.48
SNCAIP-217ENST00000512385 NUTM2FA1L443 756 aa18.07■□□□□ 0.48
SNCAIP-217ENST00000512385 DDRGK1Q96HY6 314 aa18.07■□□□□ 0.48
SNCAIP-217ENST00000512385 RGS3P49796 1198 aa18.06■□□□□ 0.48
SNCAIP-217ENST00000512385 SRPK2P78362 688 aaKnown RBP18.05■□□□□ 0.48
SNCAIP-217ENST00000512385 CARD14Q9BXL6 1004 aa18.05■□□□□ 0.48
SNCAIP-217ENST00000512385 NCKAP5LQ9HCH0 1330 aa18.05■□□□□ 0.48
SNCAIP-217ENST00000512385 RALBP1Q15311 655 aa18.05■□□□□ 0.48
SNCAIP-217ENST00000512385 UBR1Q8IWV7 1749 aa18.05■□□□□ 0.48
SNCAIP-217ENST00000512385 SETBP1Q9Y6X0 1596 aa18.03■□□□□ 0.48
SNCAIP-217ENST00000512385 NLRP13Q86W25 1043 aa18.03■□□□□ 0.48
SNCAIP-217ENST00000512385 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.03■□□□□ 0.48
SNCAIP-217ENST00000512385 C8orf34Q49A92 452 aa18.02■□□□□ 0.47
SNCAIP-217ENST00000512385 EID1Q9Y6B2 187 aa18.02■□□□□ 0.47
SNCAIP-217ENST00000512385 TNNT2P45379 298 aaPredicted RBP18.01■□□□□ 0.47
SNCAIP-217ENST00000512385 THEMISQ8N1K5 641 aaPredicted RBP18.01■□□□□ 0.47
SNCAIP-217ENST00000512385 KNSTRNQ9Y448 316 aa18.01■□□□□ 0.47
SNCAIP-217ENST00000512385 NRXN3Q9Y4C0 1643 aa18■□□□□ 0.47
SNCAIP-217ENST00000512385 QRICH2Q9H0J4 1663 aa18■□□□□ 0.47
SNCAIP-217ENST00000512385 ARXQ96QS3 562 aa17.99■□□□□ 0.47
SNCAIP-217ENST00000512385 NLRP1Q9C000 1473 aa17.99■□□□□ 0.47
SNCAIP-217ENST00000512385 CDCA8Q53HL2 280 aa17.99■□□□□ 0.47
SNCAIP-217ENST00000512385 ARHGEF28Q8N1W1 1705 aaKnown RBP17.99■□□□□ 0.47
SNCAIP-217ENST00000512385 HDGFP51858 240 aaKnown RBP17.98■□□□□ 0.47
SNCAIP-217ENST00000512385 PDE3BQ13370 1112 aa17.98■□□□□ 0.47
SNCAIP-217ENST00000512385 CDK19Q9BWU1 502 aa17.98■□□□□ 0.47
SNCAIP-217ENST00000512385 ADAMTS13Q76LX8 1427 aa17.98■□□□□ 0.47
SNCAIP-217ENST00000512385 KDM2BQ8NHM5 1336 aa17.98■□□□□ 0.47
SNCAIP-217ENST00000512385 EVC2Q86UK5 1308 aa17.97■□□□□ 0.47
SNCAIP-217ENST00000512385 TULP4Q9NRJ4 1543 aa17.97■□□□□ 0.47
SNCAIP-217ENST00000512385 AMER1Q5JTC6 1135 aaPredicted RBP17.97■□□□□ 0.47
SNCAIP-217ENST00000512385 KTN1Q86UP2 1357 aaKnown RBP17.96■□□□□ 0.47
SNCAIP-217ENST00000512385 ROBO2Q9HCK4 1378 aa17.96■□□□□ 0.47
SNCAIP-217ENST00000512385 HSPA2P54652 639 aa17.96■□□□□ 0.47
SNCAIP-217ENST00000512385 ADAMTSL3P82987 1691 aa17.95■□□□□ 0.46
SNCAIP-217ENST00000512385 FAM161AQ3B820 660 aa17.95■□□□□ 0.46
SNCAIP-217ENST00000512385 AMOTL2Q9Y2J4 779 aa17.95■□□□□ 0.46
SNCAIP-217ENST00000512385 MYO3AQ8NEV4 1616 aa17.94■□□□□ 0.46
SNCAIP-217ENST00000512385 CABP1Q9NZU7 370 aa17.94■□□□□ 0.46
SNCAIP-217ENST00000512385 ADAMTS8Q9UP79 889 aa17.94■□□□□ 0.46
SNCAIP-217ENST00000512385 PTPRUQ92729 1446 aa17.94■□□□□ 0.46
SNCAIP-217ENST00000512385 MYOM1P52179 1685 aa17.94■□□□□ 0.46
SNCAIP-217ENST00000512385 PARD3Q8TEW0 1356 aa17.93■□□□□ 0.46
SNCAIP-217ENST00000512385 SBNO2Q9Y2G9 1366 aa17.92■□□□□ 0.46
SNCAIP-217ENST00000512385 SETD1AO15047 1707 aaKnown RBP17.92■□□□□ 0.46
SNCAIP-217ENST00000512385 KDM5AP29375 1690 aaKnown RBP17.92■□□□□ 0.46
SNCAIP-217ENST00000512385 PLEKHG1Q9ULL1 1385 aa17.92■□□□□ 0.46
SNCAIP-217ENST00000512385 KDM4FA0A1W2PPD8 638 aa17.91■□□□□ 0.46
SNCAIP-217ENST00000512385 KCNA6P17658 529 aa17.91■□□□□ 0.46
SNCAIP-217ENST00000512385 SLKQ9H2G2 1235 aaPredicted RBP17.91■□□□□ 0.46
SNCAIP-217ENST00000512385 CEP170BQ9Y4F5 1589 aaPredicted RBP17.91■□□□□ 0.46
SNCAIP-217ENST00000512385 ABCC11Q96J66 1382 aa17.91■□□□□ 0.46
SNCAIP-217ENST00000512385 FBLN1P23142 703 aa17.9■□□□□ 0.46
SNCAIP-217ENST00000512385 SEC24BO95487 1268 aa17.9■□□□□ 0.46
SNCAIP-217ENST00000512385 CENPQQ7L2Z9 268 aaPredicted RBP17.89■□□□□ 0.46
SNCAIP-217ENST00000512385 NSD3Q9BZ95 1437 aa17.89■□□□□ 0.46
SNCAIP-217ENST00000512385 ANKLE2Q86XL3 938 aa17.89■□□□□ 0.45
SNCAIP-217ENST00000512385 RRAGDQ9NQL2 400 aaPredicted RBP17.88■□□□□ 0.45
SNCAIP-217ENST00000512385 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.88■□□□□ 0.45
SNCAIP-217ENST00000512385 ARHGAP23Q9P227 1491 aa17.87■□□□□ 0.45
SNCAIP-217ENST00000512385 GGNBP2Q9H3C7 697 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms